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The map label for this gene is crtI [H]

Identifier: 222524732

GI number: 222524732

Start: 1845267

End: 1846928

Strand: Reverse

Name: crtI [H]

Synonym: Chy400_1459

Alternate gene names: 222524732

Gene position: 1846928-1845267 (Counterclockwise)

Preceding gene: 222524733

Following gene: 222524731

Centisome position: 35.05

GC content: 62.21

Gene sequence:

>1662_bases
ATGGCAGCAACGAGCGACTACGACGTGATTGTCGTAGGTGGTGGTCACAACGGCCTTACCTGTGCCGGTTATCTGGCCAG
GGCCGGTAAGCGCGTACTGGTACTCGAACGACGCCCGATTGTCGGCGGAGCCGTCTGTACCGAAGAGGTCATCCCCGGCT
ACAAAATCGATGTTGGCTCATCGGCCCACATCATGATCCACCTTACCCCGATTGTCCGTGATCTCGAACTCGAACGTCAT
GGTCTCGAGTACATCGACATGGACCCGTATGCCTTCTATCCACTTCCCGACGGGAGTGGCGCCATCTACTTCTACCGCGA
TGTTGAACGCACGTGCCAGAGCATTGCCACGGTCAGCCCGCGCGATGCCGAAGCCTACCGGCGCTTCCTCGATTTCTGGA
CACCCCTGAACGAGGCGGTGTTTGATGTCTTCCTCAATCCGCCATCAGTTACCCGGCTGTTCGGCAAAGTGGCGTCGAGC
ATTCCCCGCTTGCCGAAAGCTGAACAGAAGGTGTTGGAAGTAACGCGCCGGCTCTTCACCAGCTATGCCCAACTGATCGA
AGAGACCTTCGAGAGCGAGGCGATGCGGGCAGCGATGACCTGGCTGGCGGCGCAGAGCGGCCCACCACCGGACGAAATCG
GTGCCGGCGACTTTTTCGGCTGGCACGCCATGTTGCACTACAGCGGCGCCAAACATCCCCGTGGCGGTTCGGGCATGCTG
ACCCAGGCCATGGCCCGCTCGCTCAAAGCCATGGGTGGTGAAGTCATCCTCGATGCCCCGGTGCGGCGCATCCTGGTGCA
GAACGGGCGAGTGCAGGGCGTGGAAACGGCAGACGGTCAGCGCTATTCGGCCCCGATTGTTGTTTCCAACGCTCACGTGC
TGACAACTTTCCTGCAACTGGTTGGCCCCGAGCACTTGAGTGCCGATCTGGTGCGACGCCTCAACCACATTCGGATCGGG
AACGGCTTTGGCATGACCGTGCGCTGCGCCGCCGAAGAGCTGCCCGACTACATCGCCGCCCGCAGCTATGGCCGCCCACA
CGAGAGTCACCACGGCCTGCAACTGCTGAGTCCCAGCATGAACTACGTGCGGCGCGCCTACGAAGACTACCTGCGCGGCG
AACCCAGCCGCGAACCGGCGGTGATTGCCATGACCTTTTCGGCCATCGATCCCGATGTGGCACCGCCCGGCAAGCACACC
GTATTCCTCTGGTCGCAATACTTCCCGTACCAGCTCAGCAATGGCCGGCATTGGGACGACATCCGCGAGTCGGTTGCCGA
CTCGATCCTCGAAGTACTCTACCGGTACGCGCCAAACATGCGCGGCAAGATTATCGACCGCTTCATCCAAACCCCACTCG
ACCTTGAGCGGCGGATCGGCCTGCTGCGGGGCAACGTCATGCACGTCGAGATGAGCTTTGACCAGATGTTCTTCTTCCGC
CCCCTGCCAGAACTGGCCGGCTACCGTACCCCGATTCGGGGGTTATACCTGACCGGCGCCAGCACCCATCCGGGTGGCGG
CGTCTTCGGCGCTAGTGGCTACAACACTGCGCGAGTGGTACTGGCCGATACCCGTGCCCGGCGTTGGGGACCAATCGTGC
TCGGTGCCGGCGCACTGGCCGCCGGAGCGGTCCTCGCCGGGCGCAAACTACTGCGGGACTAA

Upstream 100 bases:

>100_bases
CGCGCTGAGCGCCGATGGCAAAATCTCTCCAGCCGAGCCGCAAGATGAATGTATACTGATCATGGAACGTGTTTTGTAAA
CAGTGCAAGAAAGGTTGTCC

Downstream 100 bases:

>100_bases
CCGCCGCATATTGACGGAGAGGCGCTGCTGGCGCCTCTTCGGTTTGTACTGACATGTCGGCTCATCTCTGATAACAGTGC
ACTCTGTTTGAGCATACTCT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MAATSDYDVIVVGGGHNGLTCAGYLARAGKRVLVLERRPIVGGAVCTEEVIPGYKIDVGSSAHIMIHLTPIVRDLELERH
GLEYIDMDPYAFYPLPDGSGAIYFYRDVERTCQSIATVSPRDAEAYRRFLDFWTPLNEAVFDVFLNPPSVTRLFGKVASS
IPRLPKAEQKVLEVTRRLFTSYAQLIEETFESEAMRAAMTWLAAQSGPPPDEIGAGDFFGWHAMLHYSGAKHPRGGSGML
TQAMARSLKAMGGEVILDAPVRRILVQNGRVQGVETADGQRYSAPIVVSNAHVLTTFLQLVGPEHLSADLVRRLNHIRIG
NGFGMTVRCAAEELPDYIAARSYGRPHESHHGLQLLSPSMNYVRRAYEDYLRGEPSREPAVIAMTFSAIDPDVAPPGKHT
VFLWSQYFPYQLSNGRHWDDIRESVADSILEVLYRYAPNMRGKIIDRFIQTPLDLERRIGLLRGNVMHVEMSFDQMFFFR
PLPELAGYRTPIRGLYLTGASTHPGGGVFGASGYNTARVVLADTRARRWGPIVLGAGALAAGAVLAGRKLLRD

Sequences:

>Translated_553_residues
MAATSDYDVIVVGGGHNGLTCAGYLARAGKRVLVLERRPIVGGAVCTEEVIPGYKIDVGSSAHIMIHLTPIVRDLELERH
GLEYIDMDPYAFYPLPDGSGAIYFYRDVERTCQSIATVSPRDAEAYRRFLDFWTPLNEAVFDVFLNPPSVTRLFGKVASS
IPRLPKAEQKVLEVTRRLFTSYAQLIEETFESEAMRAAMTWLAAQSGPPPDEIGAGDFFGWHAMLHYSGAKHPRGGSGML
TQAMARSLKAMGGEVILDAPVRRILVQNGRVQGVETADGQRYSAPIVVSNAHVLTTFLQLVGPEHLSADLVRRLNHIRIG
NGFGMTVRCAAEELPDYIAARSYGRPHESHHGLQLLSPSMNYVRRAYEDYLRGEPSREPAVIAMTFSAIDPDVAPPGKHT
VFLWSQYFPYQLSNGRHWDDIRESVADSILEVLYRYAPNMRGKIIDRFIQTPLDLERRIGLLRGNVMHVEMSFDQMFFFR
PLPELAGYRTPIRGLYLTGASTHPGGGVFGASGYNTARVVLADTRARRWGPIVLGAGALAAGAVLAGRKLLRD
>Mature_552_residues
AATSDYDVIVVGGGHNGLTCAGYLARAGKRVLVLERRPIVGGAVCTEEVIPGYKIDVGSSAHIMIHLTPIVRDLELERHG
LEYIDMDPYAFYPLPDGSGAIYFYRDVERTCQSIATVSPRDAEAYRRFLDFWTPLNEAVFDVFLNPPSVTRLFGKVASSI
PRLPKAEQKVLEVTRRLFTSYAQLIEETFESEAMRAAMTWLAAQSGPPPDEIGAGDFFGWHAMLHYSGAKHPRGGSGMLT
QAMARSLKAMGGEVILDAPVRRILVQNGRVQGVETADGQRYSAPIVVSNAHVLTTFLQLVGPEHLSADLVRRLNHIRIGN
GFGMTVRCAAEELPDYIAARSYGRPHESHHGLQLLSPSMNYVRRAYEDYLRGEPSREPAVIAMTFSAIDPDVAPPGKHTV
FLWSQYFPYQLSNGRHWDDIRESVADSILEVLYRYAPNMRGKIIDRFIQTPLDLERRIGLLRGNVMHVEMSFDQMFFFRP
LPELAGYRTPIRGLYLTGASTHPGGGVFGASGYNTARVVLADTRARRWGPIVLGAGALAAGAVLAGRKLLRD

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI229577391, Length=551, Percent_Identity=33.5753176043557, Blast_Score=285, Evalue=9e-77,
Organism=Caenorhabditis elegans, GI17540238, Length=532, Percent_Identity=31.015037593985, Blast_Score=249, Evalue=4e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 61159; Mature: 61028

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATSDYDVIVVGGGHNGLTCAGYLARAGKRVLVLERRPIVGGAVCTEEVIPGYKIDVGS
CCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCEEEECCC
SAHIMIHLTPIVRDLELERHGLEYIDMDPYAFYPLPDGSGAIYFYRDVERTCQSIATVSP
CCEEEEEEECHHHHHHHHHCCCCEEECCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCCC
RDAEAYRRFLDFWTPLNEAVFDVFLNPPSVTRLFGKVASSIPRLPKAEQKVLEVTRRLFT
CCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SYAQLIEETFESEAMRAAMTWLAAQSGPPPDEIGAGDFFGWHAMLHYSGAKHPRGGSGML
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHEECCCCCCCCCCCHH
TQAMARSLKAMGGEVILDAPVRRILVQNGRVQGVETADGQRYSAPIVVSNAHVLTTFLQL
HHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEECEECCCCCEECCCEEEECHHHHHHHHHH
VGPEHLSADLVRRLNHIRIGNGFGMTVRCAAEELPDYIAARSYGRPHESHHGLQLLSPSM
HCCCHHHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEECCHH
NYVRRAYEDYLRGEPSREPAVIAMTFSAIDPDVAPPGKHTVFLWSQYFPYQLSNGRHWDD
HHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEECCCCCCHHH
IRESVADSILEVLYRYAPNMRGKIIDRFIQTPLDLERRIGLLRGNVMHVEMSFDQMFFFR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECHHHHHHHC
PLPELAGYRTPIRGLYLTGASTHPGGGVFGASGYNTARVVLADTRARRWGPIVLGAGALA
CCHHHCCCCCCCCEEEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEEECHHHH
AGAVLAGRKLLRD
HHHHHHHHHHHCC
>Mature Secondary Structure 
AATSDYDVIVVGGGHNGLTCAGYLARAGKRVLVLERRPIVGGAVCTEEVIPGYKIDVGS
CCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCEEEECCC
SAHIMIHLTPIVRDLELERHGLEYIDMDPYAFYPLPDGSGAIYFYRDVERTCQSIATVSP
CCEEEEEEECHHHHHHHHHCCCCEEECCCEEEEECCCCCCEEEEEHHHHHHHHHHHCCCC
RDAEAYRRFLDFWTPLNEAVFDVFLNPPSVTRLFGKVASSIPRLPKAEQKVLEVTRRLFT
CCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SYAQLIEETFESEAMRAAMTWLAAQSGPPPDEIGAGDFFGWHAMLHYSGAKHPRGGSGML
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHEECCCCCCCCCCCHH
TQAMARSLKAMGGEVILDAPVRRILVQNGRVQGVETADGQRYSAPIVVSNAHVLTTFLQL
HHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEECEECCCCCEECCCEEEECHHHHHHHHHH
VGPEHLSADLVRRLNHIRIGNGFGMTVRCAAEELPDYIAARSYGRPHESHHGLQLLSPSM
HCCCHHHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEECCHH
NYVRRAYEDYLRGEPSREPAVIAMTFSAIDPDVAPPGKHTVFLWSQYFPYQLSNGRHWDD
HHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCEECCCCCCHHH
IRESVADSILEVLYRYAPNMRGKIIDRFIQTPLDLERRIGLLRGNVMHVEMSFDQMFFFR
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECHHHHHHHC
PLPELAGYRTPIRGLYLTGASTHPGGGVFGASGYNTARVVLADTRARRWGPIVLGAGALA
CCHHHCCCCCCCCEEEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEEECHHHH
AGAVLAGRKLLRD
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]