| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is srlB [C]
Identifier: 222524723
GI number: 222524723
Start: 1838045
End: 1838410
Strand: Reverse
Name: srlB [C]
Synonym: Chy400_1450
Alternate gene names: 222524723
Gene position: 1838410-1838045 (Counterclockwise)
Preceding gene: 222524724
Following gene: 222524722
Centisome position: 34.89
GC content: 44.81
Gene sequence:
>366_bases ATGATCAAATTTTCAGCGACTATTTCTGCAATTGGTCCGCTTGTCGACGAGTTTTGTTCGGCAGGGATAATGGTTTTCTT CGGACAAAATGCGCCGGACGAATTACGTAGCTTTGCCATTCTTCACGATGGTGGAACGCTCATCTCAGATGTAGTCGTGG GAGACGTGTTTTACATTGGTGATGAGCGTTTCACAGTCCTTGCTGTGGGAGAGGTTGCGAATCAAAACTTATGTTCACTT GGTCATTTCGTAATCAAGTTCAATGGAGAGAAAACCCCTGAAATGCCTGGTGACATTTGTGTTGAGATGCGCCCACTCCC ACACATTAAAATAGGCGAAACCTTTGGTTTTGCGTCTGATCCTTAA
Upstream 100 bases:
>100_bases CTGGTCCATTGATGCGCTTTATCACTGAAGAATATTTTGTCTCGGGTGTAAGACCGGAAGATGTGGAATTGATCGATGAG TAATACTAGCGGGCATTCGC
Downstream 100 bases:
>100_bases TTGGAACGAGATGTTTTATTACTCAATATTATAATCTTGTTTCAAAGAAGTTAATTGCAGGATAAAATATTAAATTTCGA ATCAATTTAATTAATCGTTA
Product: PTS system glucitol/sorbitol-specific IIA component
Products: Protein Histidine; Sugar Phosphate. [C]
Alternate protein names: PTS System Glucitol-Specific III; PTS System Protein; PTS System Transporter Subunit IIA; Sorbitol PTS; PTS System Glucitol/Sorbitol-Specific IIA Component; PTS System Glucitol/Sorbitol-Specific IIA Subunit; Phosphotransferase; Sorbitol PTS EIIA; PTS System IIa Component; PTS System Sorbitol-Specific IIA Component
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIGDERFTVLAVGEVANQNLCSL GHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASDP
Sequences:
>Translated_121_residues MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIGDERFTVLAVGEVANQNLCSL GHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASDP >Mature_121_residues MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIGDERFTVLAVGEVANQNLCSL GHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASDP
Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim
COG id: COG3731
COG function: function code G; Phosphotransferase system sorbitol-specific component IIA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789056, Length=98, Percent_Identity=33.6734693877551, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69 [C]
Molecular weight: Translated: 13039; Mature: 13039
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: PS51097 PTS_EIIA_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIG CEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEEEEEECCCCHHHHHHHCEEEEEC DERFTVLAVGEVANQNLCSLGHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASD CCCEEEEEECCCCCCCHHCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCC P C >Mature Secondary Structure MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIG CEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEEEEEECCCCHHHHHHHCEEEEEC DERFTVLAVGEVANQNLCSLGHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASD CCCEEEEEECCCCCCCHHCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Protein N-Phosphohistidine; Sugar [C]
Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. [C]
General reaction: Transferases; Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA