Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is srlB [C]

Identifier: 222524723

GI number: 222524723

Start: 1838045

End: 1838410

Strand: Reverse

Name: srlB [C]

Synonym: Chy400_1450

Alternate gene names: 222524723

Gene position: 1838410-1838045 (Counterclockwise)

Preceding gene: 222524724

Following gene: 222524722

Centisome position: 34.89

GC content: 44.81

Gene sequence:

>366_bases
ATGATCAAATTTTCAGCGACTATTTCTGCAATTGGTCCGCTTGTCGACGAGTTTTGTTCGGCAGGGATAATGGTTTTCTT
CGGACAAAATGCGCCGGACGAATTACGTAGCTTTGCCATTCTTCACGATGGTGGAACGCTCATCTCAGATGTAGTCGTGG
GAGACGTGTTTTACATTGGTGATGAGCGTTTCACAGTCCTTGCTGTGGGAGAGGTTGCGAATCAAAACTTATGTTCACTT
GGTCATTTCGTAATCAAGTTCAATGGAGAGAAAACCCCTGAAATGCCTGGTGACATTTGTGTTGAGATGCGCCCACTCCC
ACACATTAAAATAGGCGAAACCTTTGGTTTTGCGTCTGATCCTTAA

Upstream 100 bases:

>100_bases
CTGGTCCATTGATGCGCTTTATCACTGAAGAATATTTTGTCTCGGGTGTAAGACCGGAAGATGTGGAATTGATCGATGAG
TAATACTAGCGGGCATTCGC

Downstream 100 bases:

>100_bases
TTGGAACGAGATGTTTTATTACTCAATATTATAATCTTGTTTCAAAGAAGTTAATTGCAGGATAAAATATTAAATTTCGA
ATCAATTTAATTAATCGTTA

Product: PTS system glucitol/sorbitol-specific IIA component

Products: Protein Histidine; Sugar Phosphate. [C]

Alternate protein names: PTS System Glucitol-Specific III; PTS System Protein; PTS System Transporter Subunit IIA; Sorbitol PTS; PTS System Glucitol/Sorbitol-Specific IIA Component; PTS System Glucitol/Sorbitol-Specific IIA Subunit; Phosphotransferase; Sorbitol PTS EIIA; PTS System IIa Component; PTS System Sorbitol-Specific IIA Component

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIGDERFTVLAVGEVANQNLCSL
GHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASDP

Sequences:

>Translated_121_residues
MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIGDERFTVLAVGEVANQNLCSL
GHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASDP
>Mature_121_residues
MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIGDERFTVLAVGEVANQNLCSL
GHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASDP

Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim

COG id: COG3731

COG function: function code G; Phosphotransferase system sorbitol-specific component IIA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789056, Length=98, Percent_Identity=33.6734693877551, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.69 [C]

Molecular weight: Translated: 13039; Mature: 13039

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS51097 PTS_EIIA_TYPE_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIG
CEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEEEEEECCCCHHHHHHHCEEEEEC
DERFTVLAVGEVANQNLCSLGHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASD
CCCEEEEEECCCCCCCHHCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCC
P
C
>Mature Secondary Structure
MIKFSATISAIGPLVDEFCSAGIMVFFGQNAPDELRSFAILHDGGTLISDVVVGDVFYIG
CEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEEEEEECCCCHHHHHHHCEEEEEC
DERFTVLAVGEVANQNLCSLGHFVIKFNGEKTPEMPGDICVEMRPLPHIKIGETFGFASD
CCCEEEEEECCCCCCCHHCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Protein N-Phosphohistidine; Sugar [C]

Specific reaction: Protein N-Phosphohistidine + Sugar = Protein Histidine + Sugar Phosphate. [C]

General reaction: Transferases; Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA