| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is fabG [H]
Identifier: 222524684
GI number: 222524684
Start: 1795297
End: 1795998
Strand: Reverse
Name: fabG [H]
Synonym: Chy400_1411
Alternate gene names: 222524684
Gene position: 1795998-1795297 (Counterclockwise)
Preceding gene: 222524685
Following gene: 222524683
Centisome position: 34.09
GC content: 57.41
Gene sequence:
>702_bases ATGGATTTGGCAGGAAAGGTTGCGATTATCACCGGCGGCACAGGGGGATTAGGAGTAGCGGTTGTCGAACGTTTGGCGAA TGCTGGCGCTACGGTTGTCGCCCCCTTTGTGAAAGAGGATGCATTTCGGTCACTTGCCGAGCGTATACCGGCAGTAATCG GCTTACCGCTCGATCTCACCGATGAATCGGCAACCCAGGCCGCCTATCGCACGATTGCAACCACGCATGGTGGGATCGAC ATCTTGATCAACGCTGCGGGTGGCTTCGCCGGTGGCGAGCCGGTGCATCAAACGCCATGGGCGCTCTGGCAGGCGCAGCT TGATATAAACCTGAAGACGGCTGTAATTTCGTGTGCCGCTGCCATTCCCCACCTGATTGCTCGCGGTGGCGGGGCAATTG TGAATGTTAGCAGCCGGACTGCGACTCAGGCCGGTGCCAATCTGGCGGCCTATGCGGCTGCCAAGCGAGCGGTGCTGCAA CTGACCGAAGCACTGGCTGCCGAATTGCGCCCTCATGACATTACCGTCAACGCCGTATTACCAAGTGTGATTGATACACC AACCAACCGCTCGGCAATGCCAAAAGCAAATCATGAATCCTGGGTGAAACCAGAAGAGATCGCCGCCGTCATTCACTTTC TCGTCAGCCCGGCAGCACGGATCATCAGCGGTGCAGCAATTCCGGTGTATGGGAGGGCTTAA
Upstream 100 bases:
>100_bases GGGTTGCCTGCAAGGAGTGCTCTCCGTTTGTCTGAGCATAGAGGCGACTCTGGCGTAGGTGTGCGCCAGAGTTGTTTATA TATCTACGAGAGGAAGAGCC
Downstream 100 bases:
>100_bases AAGAGTTGACAACAGAGTCGTCTTTCCCCTACAATCACCCGTAGCCCCGTTGCTCAGTGACCATGCTGTCAGCTCGATGT GGAAAGAGGTCAGTCATGGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDLAGKVAIITGGTGGLGVAVVERLANAGATVVAPFVKEDAFRSLAERIPAVIGLPLDLTDESATQAAYRTIATTHGGID ILINAAGGFAGGEPVHQTPWALWQAQLDINLKTAVISCAAAIPHLIARGGGAIVNVSSRTATQAGANLAAYAAAKRAVLQ LTEALAAELRPHDITVNAVLPSVIDTPTNRSAMPKANHESWVKPEEIAAVIHFLVSPAARIISGAAIPVYGRA
Sequences:
>Translated_233_residues MDLAGKVAIITGGTGGLGVAVVERLANAGATVVAPFVKEDAFRSLAERIPAVIGLPLDLTDESATQAAYRTIATTHGGID ILINAAGGFAGGEPVHQTPWALWQAQLDINLKTAVISCAAAIPHLIARGGGAIVNVSSRTATQAGANLAAYAAAKRAVLQ LTEALAAELRPHDITVNAVLPSVIDTPTNRSAMPKANHESWVKPEEIAAVIHFLVSPAARIISGAAIPVYGRA >Mature_233_residues MDLAGKVAIITGGTGGLGVAVVERLANAGATVVAPFVKEDAFRSLAERIPAVIGLPLDLTDESATQAAYRTIATTHGGID ILINAAGGFAGGEPVHQTPWALWQAQLDINLKTAVISCAAAIPHLIARGGGAIVNVSSRTATQAGANLAAYAAAKRAVLQ LTEALAAELRPHDITVNAVLPSVIDTPTNRSAMPKANHESWVKPEEIAAVIHFLVSPAARIISGAAIPVYGRA
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=33.8709677419355, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=32.9365079365079, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=31.9502074688797, Blast_Score=94, Evalue=7e-20, Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=30.6122448979592, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=30.8, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI66933014, Length=244, Percent_Identity=27.0491803278689, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=34.0540540540541, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=31.7708333333333, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=27.7310924369748, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI208973246, Length=236, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI302344755, Length=105, Percent_Identity=40, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI109715829, Length=234, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI31542939, Length=225, Percent_Identity=25.7777777777778, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=29.9595141700405, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=29.1666666666667, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=29.5081967213115, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=25.7142857142857, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=29.5081967213115, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI87082100, Length=212, Percent_Identity=32.0754716981132, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=25.6983240223464, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=24.8031496062992, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI2367365, Length=235, Percent_Identity=28.936170212766, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=28.7449392712551, Blast_Score=70, Evalue=9e-14, Organism=Escherichia coli, GI1787526, Length=233, Percent_Identity=27.0386266094421, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=27.4590163934426, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=28.4, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=30.4, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=28.8617886178862, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562910, Length=243, Percent_Identity=30.8641975308642, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560150, Length=241, Percent_Identity=30.7053941908714, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=28.4552845528455, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=28.968253968254, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=26.7206477732794, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562990, Length=241, Percent_Identity=30.7053941908714, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=26.6129032258064, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562904, Length=240, Percent_Identity=29.5833333333333, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17560332, Length=242, Percent_Identity=32.2314049586777, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17531453, Length=216, Percent_Identity=32.4074074074074, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17560220, Length=241, Percent_Identity=31.1203319502075, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562906, Length=212, Percent_Identity=29.7169811320755, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17559104, Length=243, Percent_Identity=27.9835390946502, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17544670, Length=202, Percent_Identity=29.2079207920792, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17562908, Length=241, Percent_Identity=28.2157676348548, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17538182, Length=206, Percent_Identity=27.1844660194175, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=27.0491803278689, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI21355319, Length=240, Percent_Identity=32.9166666666667, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=31.0204081632653, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24643142, Length=203, Percent_Identity=35.4679802955665, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=31.9672131147541, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24644337, Length=250, Percent_Identity=29.2, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=28.4584980237154, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI24665247, Length=216, Percent_Identity=28.7037037037037, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI221331216, Length=216, Percent_Identity=28.7037037037037, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24665243, Length=219, Percent_Identity=29.2237442922374, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI221331218, Length=219, Percent_Identity=29.2237442922374, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007236, Length=228, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28574402, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24584744, Length=194, Percent_Identity=27.319587628866, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24641232, Length=228, Percent_Identity=28.9473684210526, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI116007234, Length=234, Percent_Identity=28.6324786324786, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358495, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI62472128, Length=233, Percent_Identity=27.4678111587983, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17647337, Length=233, Percent_Identity=27.4678111587983, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472140, Length=233, Percent_Identity=27.4678111587983, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17737361, Length=194, Percent_Identity=29.8969072164948, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007238, Length=213, Percent_Identity=27.2300469483568, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24641388, Length=226, Percent_Identity=26.9911504424779, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24665264, Length=174, Percent_Identity=32.183908045977, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 23853; Mature: 23853
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLAGKVAIITGGTGGLGVAVVERLANAGATVVAPFVKEDAFRSLAERIPAVIGLPLDLT CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCHHHCCCCCCCC DESATQAAYRTIATTHGGIDILINAAGGFAGGEPVHQTPWALWQAQLDINLKTAVISCAA CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHH AIPHLIARGGGAIVNVSSRTATQAGANLAAYAAAKRAVLQLTEALAAELRPHDITVNAVL HHHHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHH PSVIDTPTNRSAMPKANHESWVKPEEIAAVIHFLVSPAARIISGAAIPVYGRA HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDLAGKVAIITGGTGGLGVAVVERLANAGATVVAPFVKEDAFRSLAERIPAVIGLPLDLT CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCHHHCCCCCCCC DESATQAAYRTIATTHGGIDILINAAGGFAGGEPVHQTPWALWQAQLDINLKTAVISCAA CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHH AIPHLIARGGGAIVNVSSRTATQAGANLAAYAAAKRAVLQLTEALAAELRPHDITVNAVL HHHHHHHCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHH PSVIDTPTNRSAMPKANHESWVKPEEIAAVIHFLVSPAARIISGAAIPVYGRA HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]