| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524506
Identifier: 222524506
GI number: 222524506
Start: 1565554
End: 1566225
Strand: Reverse
Name: 222524506
Synonym: Chy400_1230
Alternate gene names: NA
Gene position: 1566225-1565554 (Counterclockwise)
Preceding gene: 222524507
Following gene: 222524505
Centisome position: 29.73
GC content: 52.68
Gene sequence:
>672_bases ATGGCAGAAGTACAGTTTCTCGGTCATTCCTGTTTTCGATTACGCGGTCGTGATGGCACTATCGTCTGCGATCCCTACCA TCGCTCAATCGGCCTCGATATTGGCCGACCCACCGCAACCATTGTGACCGTCAGCCATCACCATCCCGATCACGATAATG CTGCCGCTATCCGCCCGTTGCGCGAGCGCGTGTTCGTGGTTGATGGTCCTGGCGAGTACGAAATCGGTGGTGTCCTGATC ACCGGTGTGCGTACCTTCCACGATCAGGTAAAAGGTGCCGAACGTGGGTTTAATACGGTCTACATCATCCATCTGGACGA TCTGGTCTTTTGTCACTTGGGCGATCTTGGTCATGAGTTGACAACCGGTCAGCTCGAAGAGATCGGCTCCAATGTTGATG TCCTGTTTGTGCCGGTGGGGGGTGGTGAGACGATTGGGCCAGCACTTGCCAGTAATGTGATCAGCCAGATTGAACCACGG TTTGTGATACCGATGCACTATGCGATGGGGCAAACAAATTTCGATCCTCCCCTGGCGCCCTTGGAGAAGTTCATCAGTGA AATGGGATTGAAAGAGTATACGGCTGAAGACAAGTTTGTGATCAATGCCAACGCACTACCGGCTGACGAAGAACAGACGC GGATTGTCATTTTACGACCGGTGAATGGCTAA
Upstream 100 bases:
>100_bases ACTTCGCTTGCAGTTGCAATGACGTTATTTGAGCAAAGGTCGCTGTTTGAGTAGAATACTGTGAGTGAAAAGGATACCAG GACGGTAAGGATTTATCTTT
Downstream 100 bases:
>100_bases CGAACGGGTTTTGTTTGTGGTATACTAAGCGATTGAGGTGAAAAACGCTGTCTTGATCAGGGACATATTTGACCGTTCGT ATCATCACTAAGCAACGATT
Product: beta-lactamase fold-like Zn-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MAEVQFLGHSCFRLRGRDGTIVCDPYHRSIGLDIGRPTATIVTVSHHHPDHDNAAAIRPLRERVFVVDGPGEYEIGGVLI TGVRTFHDQVKGAERGFNTVYIIHLDDLVFCHLGDLGHELTTGQLEEIGSNVDVLFVPVGGGETIGPALASNVISQIEPR FVIPMHYAMGQTNFDPPLAPLEKFISEMGLKEYTAEDKFVINANALPADEEQTRIVILRPVNG
Sequences:
>Translated_223_residues MAEVQFLGHSCFRLRGRDGTIVCDPYHRSIGLDIGRPTATIVTVSHHHPDHDNAAAIRPLRERVFVVDGPGEYEIGGVLI TGVRTFHDQVKGAERGFNTVYIIHLDDLVFCHLGDLGHELTTGQLEEIGSNVDVLFVPVGGGETIGPALASNVISQIEPR FVIPMHYAMGQTNFDPPLAPLEKFISEMGLKEYTAEDKFVINANALPADEEQTRIVILRPVNG >Mature_222_residues AEVQFLGHSCFRLRGRDGTIVCDPYHRSIGLDIGRPTATIVTVSHHHPDHDNAAAIRPLRERVFVVDGPGEYEIGGVLIT GVRTFHDQVKGAERGFNTVYIIHLDDLVFCHLGDLGHELTTGQLEEIGSNVDVLFVPVGGGETIGPALASNVISQIEPRF VIPMHYAMGQTNFDPPLAPLEKFISEMGLKEYTAEDKFVINANALPADEEQTRIVILRPVNG
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 24444; Mature: 24313
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVQFLGHSCFRLRGRDGTIVCDPYHRSIGLDIGRPTATIVTVSHHHPDHDNAAAIRPL CCCEEEECCEEEEEECCCCCEEECCCCCEECCCCCCCEEEEEEEECCCCCCCCHHHHCCC RERVFVVDGPGEYEIGGVLITGVRTFHDQVKGAERGFNTVYIIHLDDLVFCHLGDLGHEL CCEEEEEECCCCEEECCEEEECHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCC TTGQLEEIGSNVDVLFVPVGGGETIGPALASNVISQIEPRFVIPMHYAMGQTNFDPPLAP CCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHH LEKFISEMGLKEYTAEDKFVINANALPADEEQTRIVILRPVNG HHHHHHHCCCHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure AEVQFLGHSCFRLRGRDGTIVCDPYHRSIGLDIGRPTATIVTVSHHHPDHDNAAAIRPL CCEEEECCEEEEEECCCCCEEECCCCCEECCCCCCCEEEEEEEECCCCCCCCHHHHCCC RERVFVVDGPGEYEIGGVLITGVRTFHDQVKGAERGFNTVYIIHLDDLVFCHLGDLGHEL CCEEEEEECCCCEEECCEEEECHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCC TTGQLEEIGSNVDVLFVPVGGGETIGPALASNVISQIEPRFVIPMHYAMGQTNFDPPLAP CCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHH LEKFISEMGLKEYTAEDKFVINANALPADEEQTRIVILRPVNG HHHHHHHCCCHHCCCCCCEEEECCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA