| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is recX [H]
Identifier: 222524507
GI number: 222524507
Start: 1566456
End: 1567133
Strand: Reverse
Name: recX [H]
Synonym: Chy400_1231
Alternate gene names: 222524507
Gene position: 1567133-1566456 (Counterclockwise)
Preceding gene: 222524509
Following gene: 222524506
Centisome position: 29.74
GC content: 56.19
Gene sequence:
>678_bases ATGCCTGCTGGAACAATCACTGCAATTCGGCAACAAACGAACGACGCGCAGCGTGTGAATATCTTTATCGACGGTGAGTT TGCGATTGGGATTAGCCTCAATACTCTCACCCGTATGCGCCTGGCGGTTGGCGTGCATCTCGACGATCACGGCTGGCAAC AGCTCGTTGCTTGTGAAGAGGCTGATCAGGCGATGCAAAAGGCCCTGCGCCAGCTTGAACGACGACCACGTTCCGTCAAT GAAATCTATCGCTATTTGCAACGCAAAGGCTTTCGCGAAGCGATCTGTCAACAGGTCGTTGCCCGGTTACAGGAATTAGG CCTGCTCAATGATGCCGACTTCGCCGAGCGTTGGGTCGCAAACCGGCGTACACTGCGCTATCGAGGTGAACGGGCTTTGC GCGCAGAACTACGCCAGAAAGGGATTGCACCCGAGTTGATCGAGGATGCACTATCCGGCGAGAAAGACGAACTTGGGGAA GCGTTGCGGGCAGAGCAGGCAGCTCGTGCTGTGTTAGCGCGTTACCTCAGGCATACTGACTGGCTGACGTTCCAACGCCG ACTGGGTGGATATTTGCTGCGTCGGGGTTTTGCGAGCGATCTGGTGCGTCCACTGCTCCTGCGCCTCTGGCGAGAAGCGC ATCCTGCTGACGACATCGATGATGAGGAACCCTATTGA
Upstream 100 bases:
>100_bases ACATGGGCGGTGTCGGGCGCACAAGGGGAAGCATCTGGCTGGCGAACCTCTGCGTCGTAGTGGCGGTGTCCGTCTCGTGC GCCAATTCTGACTGTATCGT
Downstream 100 bases:
>100_bases ACAGGTCGTGATTGTCCTGACATGCTCATACACGCACGGCGCGAGCGAGTACCCCTTGACCGGCAAGAATTGTGATAAGC GTACCTTTCAGCGTACCGTG
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MPAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEEADQAMQKALRQLERRPRSVN EIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVANRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGE ALRAEQAARAVLARYLRHTDWLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY
Sequences:
>Translated_225_residues MPAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEEADQAMQKALRQLERRPRSVN EIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVANRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGE ALRAEQAARAVLARYLRHTDWLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY >Mature_224_residues PAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEEADQAMQKALRQLERRPRSVNE IYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVANRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGEA LRAEQAARAVLARYLRHTDWLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 26003; Mature: 25872
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEE CCCCHHHHHHHHCCCCEEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH ADQAMQKALRQLERRPRSVNEIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVA HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGEALRAEQAARAVLARYLRHTD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure PAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEE CCCHHHHHHHHCCCCEEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH ADQAMQKALRQLERRPRSVNEIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVA HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGEALRAEQAARAVLARYLRHTD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA