| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524475
Identifier: 222524475
GI number: 222524475
Start: 1528343
End: 1530046
Strand: Direct
Name: 222524475
Synonym: Chy400_1199
Alternate gene names: NA
Gene position: 1528343-1530046 (Clockwise)
Preceding gene: 222524474
Following gene: 222524476
Centisome position: 29.01
GC content: 60.15
Gene sequence:
>1704_bases ATGGGTCTTATCGCTAGCTTTATCAGCCTGATCACAGGTGCCGTGTTCTGTTTTGGGCTGGCCCGGATTGGAATTACCCG CCGTCTGGCATTGCTGGCCGCGCTGGCGACCGGCCTGGCAGCTATTGGTGTCATCGCCAATCCGCTAGAAACGACCCCGG CAGAACCGCTGTCGAGTATCGGTGCATTATCGCTCGTTCTGCCGGCAGCGCCCGAACTGAGTGAACGAGCAATTGCGGTC ATGTTCCTGGTTGGGGGCACCCTTGGCTTACTGGCCCTGGCCGTGGTTGTACCGCCGGAGGTAGAGGGATTTGGCGCGTT GTTCGGCTGGCTCTTGCTGGCCCTGACTGCCGCCCTGCTCAGCTTAACCATTCCACCGCTCAGCTTTCTGACCCCGTTGA GCTGGGCACTGGCGGTGATTGCCGCTCATGGAGCGCTGATTGCCGCAGGCGTTGATCCAGCACCTGATCAATTACCGCCC CATTTGATTGCCGGCGGGCTAGCCGTGGTCGCTGTGACAGGTCTGATTGCAACGAGCGCCGCCTTACCTCCAGACACCCT GCCACCAACTACGCTGGTCGGACTGGCGCTGTTCGGTGCGCTGGCTTTGGCCGGAGCACCTCCCTTTGGCGGTGCGCGCA GTGCTTTTACCGCGGCACCGGCCCTGGTGGCTGCGCTCATGAGCGGACTGACCCTGCCCACTATTGGGCTTGGCTTTATC GTTCGTTTCCTGCCACAGATACCTCCTTTGCCGGCATCAACCGGTTTCATCATGGCTGCTGTTGGCGCATTTGGGGCACT GGGGGCAGCATTCACCGCCCTCAATGCGCAGTCCGGTCGCGATCTGGTCGCTCGCCACGGCGCGTTGCAGGCAGGAGTGG TCGTATGCGCGGCTGCCCTCAATGAACCGTTAGCTGGTCTGGCAGCACCGGCCCTGTTGTTGTCGCTCCAGCTCCACGCC GTTGCCGGCGGATTGGTTTGCGCTGCGATTGAACGACTGCAAGGTTCCGACCTGCTCGATGGCAAGCAACCGACAGCACA ACTACCGTTCATTGGCCTGATCTGGCTTGTGACAACGGCAGCCGCAACCGGTCTACCGCTGACCTGGAGCTTTTGGGGAT GGCGCTGGCTGATAGAGGCCGCCACCAGCCATCACGTGTGGATTATTGGCCCCTTGATGACTGCGGCAGTTATCGGTTTT GCCGCCGGATTGCCACTGCTCATTCGTTGCTGGCAGGGGAAAACACCAGTTTATACACATTGGCCAGAGGGTATGCTAAG CCTGCCGATCCTGATCCCCTTGATCCTGGCCGGGTTTGTGCCCTGGCTGGCCTGGCCACTCTGGCTGAGCTGGTCACCGT TCGCCCCACCGGTCATGCCTGCCGAACCACTTGCCTGGCCTTTTATCGGCACGGCCATCGCGACCGGCGTCATAAGCTGG TTCCTGTTACGCAAGGCCAATCCCTACCAGACAGAGCGTATGCCTGAAGACCCGGCAGTCAGTCCAACCTGGCAAGGCAT GGGAGAACTCTTGCAGGGCATGAGCGAGCTGGCCGATGCCCGTCGGCTATTCAGCCTTCTCGGTCATGGGATCGACCGCG TAAGCAGCTCGCTCCATACCATTATGATCATCTTTGAGCAACGGTATTATCTATTTGGGGTGATGATTGGCCTGTTGGCA ATCCTGTTTCTGATGGCGCAATAG
Upstream 100 bases:
>100_bases TCGGACGTAGTTAGTGTCCAGAACCCTGATGCCGCATTGCAGAGCCGTGTCTATGTAGTGTGTCACCCGGTGGAGTACCG GGTTGTTATATCGAGGATGC
Downstream 100 bases:
>100_bases AAACCCGGTAACAAGACGCGGCCCGGATAGGTGAAGAGTAACCTTCACCTACTCAAAATAAAACCCGTTGCAGCTTGTTC GGATAGACGTTCAAGATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MGLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSIGALSLVLPAAPELSERAIAV MFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALLSLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPP HLIAGGLAVVAVTGLIATSAALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAALNEPLAGLAAPALLLSLQLHA VAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTAAATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGF AAGLPLLIRCWQGKTPVYTHWPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHTIMIIFEQRYYLFGVMIGLLA ILFLMAQ
Sequences:
>Translated_567_residues MGLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSIGALSLVLPAAPELSERAIAV MFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALLSLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPP HLIAGGLAVVAVTGLIATSAALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAALNEPLAGLAAPALLLSLQLHA VAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTAAATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGF AAGLPLLIRCWQGKTPVYTHWPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHTIMIIFEQRYYLFGVMIGLLA ILFLMAQ >Mature_566_residues GLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSIGALSLVLPAAPELSERAIAVM FLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALLSLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPPH LIAGGLAVVAVTGLIATSAALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFIV RFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAALNEPLAGLAAPALLLSLQLHAV AGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTAAATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGFA AGLPLLIRCWQGKTPVYTHWPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISWF LLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHTIMIIFEQRYYLFGVMIGLLAI LFLMAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58691; Mature: 58559
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH GALSLVLPAAPELSERAIAVMFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPPHLIAGGLAVVAVTGLIATSA HHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC ALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAAL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH NEPLAGLAAPALLLSLQLHAVAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH AATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGFAAGLPLLIRCWQGKTPVYTH HHCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEE WPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHT HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IMIIFEQRYYLFGVMIGLLAILFLMAQ HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GLIASFISLITGAVFCFGLARIGITRRLALLAALATGLAAIGVIANPLETTPAEPLSSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH GALSLVLPAAPELSERAIAVMFLVGGTLGLLALAVVVPPEVEGFGALFGWLLLALTAALL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH SLTIPPLSFLTPLSWALAVIAAHGALIAAGVDPAPDQLPPHLIAGGLAVVAVTGLIATSA HHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC ALPPDTLPPTTLVGLALFGALALAGAPPFGGARSAFTAAPALVAALMSGLTLPTIGLGFI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH VRFLPQIPPLPASTGFIMAAVGAFGALGAAFTALNAQSGRDLVARHGALQAGVVVCAAAL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHH NEPLAGLAAPALLLSLQLHAVAGGLVCAAIERLQGSDLLDGKQPTAQLPFIGLIWLVTTA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH AATGLPLTWSFWGWRWLIEAATSHHVWIIGPLMTAAVIGFAAGLPLLIRCWQGKTPVYTH HHCCCCCEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEE WPEGMLSLPILIPLILAGFVPWLAWPLWLSWSPFAPPVMPAEPLAWPFIGTAIATGVISW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH FLLRKANPYQTERMPEDPAVSPTWQGMGELLQGMSELADARRLFSLLGHGIDRVSSSLHT HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IMIIFEQRYYLFGVMIGLLAILFLMAQ HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA