| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524456
Identifier: 222524456
GI number: 222524456
Start: 1498353
End: 1499855
Strand: Reverse
Name: 222524456
Synonym: Chy400_1180
Alternate gene names: NA
Gene position: 1499855-1498353 (Counterclockwise)
Preceding gene: 222524457
Following gene: 222524455
Centisome position: 28.47
GC content: 55.89
Gene sequence:
>1503_bases ATGAAGTCGTTCAAAGTCCTGCTCGTTAGCCTCACGTTTATTCTCGCCACGATCCTCAATGCTGCCTGTGGCAGCAGTCC TTCAACCCCCGCCGCCCAGCCCACCACCGCACCTGCTGCTGAACCAACCCAGGCTGCAGAACCGACCCAGGCTGCGGCAC CGACTCAGGCGCCTGCTCCCACCCAGGCTGCTACCAGTGGGCGTACCAAAGTGCGCTGGTTTGTCGGTTTGGGAGCTGGT TCAGATGAGGGGGCAATTCCGGCACAGAACGCTTTTGTCGAGCGCTTCAATGCCAGTCAGGATAAGATTGAACTGGTGAT CGAGATTGTTGACAACAACGTTGCCTTCGATACCCTGGCCACCCAGATTGCTGCCGGTAACGCTCCCTGTCTCGTCGGCC CGGTGGGTATTCGCGGACGCGATAGTTTCAAGGGCGCCTGGCTTGACCTTCAGCCGTTGATCGACAAGTACAACTATGAC CTGAGCGACTTCGATCCCAATCTGGTGAAGTTCTACCAGGTGAAGGAAGAGGGCCAGCTCGGTATTCCGTTCGCGATTTT CCCCTCCTTCATCATCTACAACAAAGACCTGTTTGACGAGGCAGGGTTGCCGTATCCACCTGCCGAACATGGTGCGCCGT GGGTTGATGAGAATGGTGTCGAGCGTGAATGGAACATGACCACGCTTACCGAACTGGCCAAGAAGCTGACCGTCGATGCC AATGGTAATGATGCCACCTCACCCGATTTTGACCCGGAGAAGATCGTTCAGTTCGGATGGATGAACCAATGGACTGACCC CCGTGGCATTGGGACCTTCTTCGGCGCCGGTTCGCTGGTCGATGACAATGGCAATGCGCAGATTCCCGATCACTGGAAGG CAGCCTGGAAGTGGACGTATGACGGCTGGTGGAAAGACTGGTTTATTCCGAATGGCCCCTACGGTGGTGCCGACTTCCTG CAAGGCCCTGGTGGCCCCTTCTCGTCGGGCAATCTGGCGATGATCCACATCCATATGTGGTACGTGGCACCGTGGGCACT GGGGAATGTTGATTTCGATTGGAATCTGGCAGCCACGCCGAGCTACAACGGGACGATTACGGCCAAGATGCATGCCGATA CCTTCGGTATTCTGAAAGGCTGCCCGACACCTGATGAAGCATTCGAGGTCTTGACCTACATGCTCAGCAAAGAGCACGTG AGTGAATTGCTCACCATCTACGGCGGCATGCCAGCCCGGCTCTCGCTCCAATCCGATTACTTCACCCAGTACAACCAGAC CAGTTTCCCCAACAAGACCGACATCAACTGGAATGTCGTGGTGGAAGCGATGAGCTACGCCGATAATCCGAACCACGAGA GCTGGATGCCCAGCTTCCAGGAGACTACGGATCGCTATAACGAGTTCTGGAACTACCTTGCCAATACACCTGATGCCGAT TTCGAGGCCGAAGTAGCTAAACTGCAAGCCGATTTACAGAAGATCTTCGACGCGGCGAAGTAG
Upstream 100 bases:
>100_bases GCGACTCAGAAAGGGGGTGAAGATACCGCCACATTGCAAAAACTCGTACCCCGACCTGTGTCCAACACAATGGTGTAGTA GTTCCAGAGGAGGAAATGAG
Downstream 100 bases:
>100_bases GTATTGGTTTCAGACCATCGATCCTGTCCTAAAGACAGGATCGATGGTGCCCCCAGGAGGTTGTTATGGCGATTGTTCCT GATGTAAGTGAAGCCCTACG
Product: family 1 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MKSFKVLLVSLTFILATILNAACGSSPSTPAAQPTTAPAAEPTQAAEPTQAAAPTQAPAPTQAATSGRTKVRWFVGLGAG SDEGAIPAQNAFVERFNASQDKIELVIEIVDNNVAFDTLATQIAAGNAPCLVGPVGIRGRDSFKGAWLDLQPLIDKYNYD LSDFDPNLVKFYQVKEEGQLGIPFAIFPSFIIYNKDLFDEAGLPYPPAEHGAPWVDENGVEREWNMTTLTELAKKLTVDA NGNDATSPDFDPEKIVQFGWMNQWTDPRGIGTFFGAGSLVDDNGNAQIPDHWKAAWKWTYDGWWKDWFIPNGPYGGADFL QGPGGPFSSGNLAMIHIHMWYVAPWALGNVDFDWNLAATPSYNGTITAKMHADTFGILKGCPTPDEAFEVLTYMLSKEHV SELLTIYGGMPARLSLQSDYFTQYNQTSFPNKTDINWNVVVEAMSYADNPNHESWMPSFQETTDRYNEFWNYLANTPDAD FEAEVAKLQADLQKIFDAAK
Sequences:
>Translated_500_residues MKSFKVLLVSLTFILATILNAACGSSPSTPAAQPTTAPAAEPTQAAEPTQAAAPTQAPAPTQAATSGRTKVRWFVGLGAG SDEGAIPAQNAFVERFNASQDKIELVIEIVDNNVAFDTLATQIAAGNAPCLVGPVGIRGRDSFKGAWLDLQPLIDKYNYD LSDFDPNLVKFYQVKEEGQLGIPFAIFPSFIIYNKDLFDEAGLPYPPAEHGAPWVDENGVEREWNMTTLTELAKKLTVDA NGNDATSPDFDPEKIVQFGWMNQWTDPRGIGTFFGAGSLVDDNGNAQIPDHWKAAWKWTYDGWWKDWFIPNGPYGGADFL QGPGGPFSSGNLAMIHIHMWYVAPWALGNVDFDWNLAATPSYNGTITAKMHADTFGILKGCPTPDEAFEVLTYMLSKEHV SELLTIYGGMPARLSLQSDYFTQYNQTSFPNKTDINWNVVVEAMSYADNPNHESWMPSFQETTDRYNEFWNYLANTPDAD FEAEVAKLQADLQKIFDAAK >Mature_500_residues MKSFKVLLVSLTFILATILNAACGSSPSTPAAQPTTAPAAEPTQAAEPTQAAAPTQAPAPTQAATSGRTKVRWFVGLGAG SDEGAIPAQNAFVERFNASQDKIELVIEIVDNNVAFDTLATQIAAGNAPCLVGPVGIRGRDSFKGAWLDLQPLIDKYNYD LSDFDPNLVKFYQVKEEGQLGIPFAIFPSFIIYNKDLFDEAGLPYPPAEHGAPWVDENGVEREWNMTTLTELAKKLTVDA NGNDATSPDFDPEKIVQFGWMNQWTDPRGIGTFFGAGSLVDDNGNAQIPDHWKAAWKWTYDGWWKDWFIPNGPYGGADFL QGPGGPFSSGNLAMIHIHMWYVAPWALGNVDFDWNLAATPSYNGTITAKMHADTFGILKGCPTPDEAFEVLTYMLSKEHV SELLTIYGGMPARLSLQSDYFTQYNQTSFPNKTDINWNVVVEAMSYADNPNHESWMPSFQETTDRYNEFWNYLANTPDAD FEAEVAKLQADLQKIFDAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55050; Mature: 55050
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFKVLLVSLTFILATILNAACGSSPSTPAAQPTTAPAAEPTQAAEPTQAAAPTQAPAP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQAATSGRTKVRWFVGLGAGSDEGAIPAQNAFVERFNASQDKIELVIEIVDNNVAFDTLA CCHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHH TQIAAGNAPCLVGPVGIRGRDSFKGAWLDLQPLIDKYNYDLSDFDPNLVKFYQVKEEGQL HHHHCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC GIPFAIFPSFIIYNKDLFDEAGLPYPPAEHGAPWVDENGVEREWNMTTLTELAKKLTVDA CCCHHHHHHHHEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECC NGNDATSPDFDPEKIVQFGWMNQWTDPRGIGTFFGAGSLVDDNGNAQIPDHWKAAWKWTY CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEEEE DGWWKDWFIPNGPYGGADFLQGPGGPFSSGNLAMIHIHMWYVAPWALGNVDFDWNLAATP CCEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCCCEEEECC SYNGTITAKMHADTFGILKGCPTPDEAFEVLTYMLSKEHVSELLTIYGGMPARLSLQSDY CCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH FTQYNQTSFPNKTDINWNVVVEAMSYADNPNHESWMPSFQETTDRYNEFWNYLANTPDAD HHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCC FEAEVAKLQADLQKIFDAAK HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSFKVLLVSLTFILATILNAACGSSPSTPAAQPTTAPAAEPTQAAEPTQAAAPTQAPAP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TQAATSGRTKVRWFVGLGAGSDEGAIPAQNAFVERFNASQDKIELVIEIVDNNVAFDTLA CCHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEECCCCCCHHHHH TQIAAGNAPCLVGPVGIRGRDSFKGAWLDLQPLIDKYNYDLSDFDPNLVKFYQVKEEGQL HHHHCCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC GIPFAIFPSFIIYNKDLFDEAGLPYPPAEHGAPWVDENGVEREWNMTTLTELAKKLTVDA CCCHHHHHHHHEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECC NGNDATSPDFDPEKIVQFGWMNQWTDPRGIGTFFGAGSLVDDNGNAQIPDHWKAAWKWTY CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEEEEE DGWWKDWFIPNGPYGGADFLQGPGGPFSSGNLAMIHIHMWYVAPWALGNVDFDWNLAATP CCEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCCCEEEECC SYNGTITAKMHADTFGILKGCPTPDEAFEVLTYMLSKEHVSELLTIYGGMPARLSLQSDY CCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH FTQYNQTSFPNKTDINWNVVVEAMSYADNPNHESWMPSFQETTDRYNEFWNYLANTPDAD HHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCC FEAEVAKLQADLQKIFDAAK HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA