| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yesP [H]
Identifier: 222524455
GI number: 222524455
Start: 1497298
End: 1498287
Strand: Reverse
Name: yesP [H]
Synonym: Chy400_1179
Alternate gene names: 222524455
Gene position: 1498287-1497298 (Counterclockwise)
Preceding gene: 222524456
Following gene: 222524454
Centisome position: 28.44
GC content: 52.63
Gene sequence:
>990_bases ATGGCGATTGTTCCTGATGTAAGTGAAGCCCTACGGGGTACTTTTGCCAGAACGAAGCGGCGGAAGTTAAGCCAGCTTGA GAAGAAAGAGATCCGCTGGGGACTACTCTTCATCAGTCCGTGGATTATCGGCTTTCTGGCTTTCTACCTCTTGCCGATGA TCGCATCGTTTGGCTTCTCGCTGTACGATTTCAATCCGGCGGTTCCTGATCAGGCCAGATTTGTTGGCTTTGCCAACTGG CAGCGAGCACTGTTTCAAGATCAGGAAGTCTGGTTATCGCTGCGTCGTACCATCCACTTTGCCGCCATCTCGTTGCCGAT CTCGCTCCTCTTTGCGCTGTTTCTGGCGATTTTGCTCAATTCGGAGCACGTGCTGGGCAAGAGTGTGTATCGCACGCTCT TCTACATGCCGACGATGATCCCGCTGGTCGCGACCGTCTTGATCTGGAATGGTGTGCTCAATGAACAGACCGGTTGGATC AATGTCATGATTGAACGCCTGACCGGAATTCGGGCAACCGGCACGCAGGGATTGCGCTGGCTGGCCGATCCCAATCTGGT CTACTATGCCTACACGATGTTCGGGTTATGGGGTGTTGGTAATGCGATGATCATCTTTCTGGCCGGTCTACAGGGCGTGC CGAGTGAACTCTACGAAGCGGCTCAGATCGATGGGGCGAACTGGTTTCAGCGTTTAATCTTCATCACCATTCCTCTGATA ACACCGGTTATCTTCTACCAGGTCGTGTTGGGCGTTATCGGCTCATTGCAGTATTTCCTCGCGCCATTTGTGCTCAACAA TGGTACCGGCTTTCCTGAAGGGATGACTCGCTTCTTTATGGTCTACTTCTACAAGCAGTCGTTCACCTTCTTCAGCATGG GGTATGGGGCGACCCTGGCCTGGTTGATGCTGATCATCGCCATGATTATCACGATTGTGCTCTTTGGCACGGCACGCTTC TGGGTCTTTTACACAACGGAGGAACGGTGA
Upstream 100 bases:
>100_bases CCGATTTACAGAAGATCTTCGACGCGGCGAAGTAGGTATTGGTTTCAGACCATCGATCCTGTCCTAAAGACAGGATCGAT GGTGCCCCCAGGAGGTTGTT
Downstream 100 bases:
>100_bases TGGTACGCACACAATACGTTCCCATGCGTTCGCTTTCTAAAACGGCACGGCTCGCCCTGACCCGCATTGCGCTTACCGGC CTGACCCTGGTTGTGCTTGG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAIVPDVSEALRGTFARTKRRKLSQLEKKEIRWGLLFISPWIIGFLAFYLLPMIASFGFSLYDFNPAVPDQARFVGFANW QRALFQDQEVWLSLRRTIHFAAISLPISLLFALFLAILLNSEHVLGKSVYRTLFYMPTMIPLVATVLIWNGVLNEQTGWI NVMIERLTGIRATGTQGLRWLADPNLVYYAYTMFGLWGVGNAMIIFLAGLQGVPSELYEAAQIDGANWFQRLIFITIPLI TPVIFYQVVLGVIGSLQYFLAPFVLNNGTGFPEGMTRFFMVYFYKQSFTFFSMGYGATLAWLMLIIAMIITIVLFGTARF WVFYTTEER
Sequences:
>Translated_329_residues MAIVPDVSEALRGTFARTKRRKLSQLEKKEIRWGLLFISPWIIGFLAFYLLPMIASFGFSLYDFNPAVPDQARFVGFANW QRALFQDQEVWLSLRRTIHFAAISLPISLLFALFLAILLNSEHVLGKSVYRTLFYMPTMIPLVATVLIWNGVLNEQTGWI NVMIERLTGIRATGTQGLRWLADPNLVYYAYTMFGLWGVGNAMIIFLAGLQGVPSELYEAAQIDGANWFQRLIFITIPLI TPVIFYQVVLGVIGSLQYFLAPFVLNNGTGFPEGMTRFFMVYFYKQSFTFFSMGYGATLAWLMLIIAMIITIVLFGTARF WVFYTTEER >Mature_328_residues AIVPDVSEALRGTFARTKRRKLSQLEKKEIRWGLLFISPWIIGFLAFYLLPMIASFGFSLYDFNPAVPDQARFVGFANWQ RALFQDQEVWLSLRRTIHFAAISLPISLLFALFLAILLNSEHVLGKSVYRTLFYMPTMIPLVATVLIWNGVLNEQTGWIN VMIERLTGIRATGTQGLRWLADPNLVYYAYTMFGLWGVGNAMIIFLAGLQGVPSELYEAAQIDGANWFQRLIFITIPLIT PVIFYQVVLGVIGSLQYFLAPFVLNNGTGFPEGMTRFFMVYFYKQSFTFFSMGYGATLAWLMLIIAMIITIVLFGTARFW VFYTTEER
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787570, Length=271, Percent_Identity=29.1512915129151, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790465, Length=233, Percent_Identity=27.8969957081545, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=26.2798634812287, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 37610; Mature: 37479
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVPDVSEALRGTFARTKRRKLSQLEKKEIRWGLLFISPWIIGFLAFYLLPMIASFGFS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LYDFNPAVPDQARFVGFANWQRALFQDQEVWLSLRRTIHFAAISLPISLLFALFLAILLN EEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SEHVLGKSVYRTLFYMPTMIPLVATVLIWNGVLNEQTGWINVMIERLTGIRATGTQGLRW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEE LADPNLVYYAYTMFGLWGVGNAMIIFLAGLQGVPSELYEAAQIDGANWFQRLIFITIPLI ECCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH TPVIFYQVVLGVIGSLQYFLAPFVLNNGTGFPEGMTRFFMVYFYKQSFTFFSMGYGATLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHEECCHHHHHH WLMLIIAMIITIVLFGTARFWVFYTTEER HHHHHHHHHHHHHHHHCCEEEEEEEECCC >Mature Secondary Structure AIVPDVSEALRGTFARTKRRKLSQLEKKEIRWGLLFISPWIIGFLAFYLLPMIASFGFS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LYDFNPAVPDQARFVGFANWQRALFQDQEVWLSLRRTIHFAAISLPISLLFALFLAILLN EEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SEHVLGKSVYRTLFYMPTMIPLVATVLIWNGVLNEQTGWINVMIERLTGIRATGTQGLRW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEE LADPNLVYYAYTMFGLWGVGNAMIIFLAGLQGVPSELYEAAQIDGANWFQRLIFITIPLI ECCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH TPVIFYQVVLGVIGSLQYFLAPFVLNNGTGFPEGMTRFFMVYFYKQSFTFFSMGYGATLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHEECCHHHHHH WLMLIIAMIITIVLFGTARFWVFYTTEER HHHHHHHHHHHHHHHHCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]