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The map label for this gene is yoaR [H]

Identifier: 222524429

GI number: 222524429

Start: 1461390

End: 1463222

Strand: Reverse

Name: yoaR [H]

Synonym: Chy400_1153

Alternate gene names: 222524429

Gene position: 1463222-1461390 (Counterclockwise)

Preceding gene: 222524433

Following gene: 222524426

Centisome position: 27.77

GC content: 59.14

Gene sequence:

>1833_bases
ATGGAACGCTCGCTACCAGCCGGAATACCTCACCGCCACCGGTCGCGCTTTTGGCGGATCATTGAATGGTTACTGGTGAT
CGCTGTCTTGATCATCCTGGCAATACTGCTAGGGTACGGCGCGATCATCCTGAGTGACCGGCTGTTGGCTGAACGTATCT
ACCCCAACATTAGTGTGCGTGGCCTGCCAATTGGTGGAATGACCCGCGCCGAAGCGCGGGCCGCACTGCACCGTCGCTAC
GCCGAATTCCTTGCCACACCGGTAACCCTGCACTTCAACGACCAGGTCTGGCGACCGGCAGCCGAAGACCTTGGCCTGCA
CCTGGCGATTGAAGAGGCGCTTGATGCCGCATTCGCGATTGGTCATCAGTCGGAATGGGAAGTAAATGCCCAAATTGCCG
CAGCGACCTGGCAATACGGCATCGATCTTCCGCTCCATCTTACCTTCGATCAGCGTGTCGCTCAGGCCACGCTCCAGATG
ATCGCCACCGAGATCGACCGTGCTCCCATTGATGCGAGTGTTGATCTGCGCGGCAGTACAGTTGTTGTCGGTCGTGAAGC
ATGGGGTCGTCAGACCTTAATCGATGAGACGTTGGCCGATATTGCGGCTGCCGTGCAAAGCCTGCAACCGCAAGAGATTG
CCATCCGCACGCGCATCCTCGAACCACAGGTACGTGATAGCGATCTGGCGCCAACCGTCAGTGAATTGCGTCTCTTGCTC
AGCGGTCCGATCCAGCTTGAAGGTCAGGGCGGTCAATGTCGAGCGGGATGTCGCTGGGAGTGGTCGCTCGATCAGATCGC
ATCCTGGATCAGGCTGCGCAGCCTGACCGCAGTTGATGGTCGTCCGGCGATGGCCGTTATGATCGACCAGGCGGCTATTC
GTGCCGCATTGACTCCAATTGCTGCTGCTCTTCGCGAAGAGGGTGGTCTGCCCAGAGTTGATTGGAATGACGGGAATCTG
CGCATCCGCACTCCCGGTACCCCCGGTCGTGGTCTGGCTGTCGAAGAGGCGATGGCCCGTATCAACGCTGTACTGTACAG
TAGCGAACGAACCGTCACCCTCCCCCTCCGCGAGCTGCCGCCACCGGTCACTGCTGACAATCTGGCTGCGCTGGGCATCA
GTGCACCGGTCGGCGTAGGGGTTAGCTCGTTCCGCAATTCAGCGCCATACCGGATCACGAATATTCAGGCCGGCACGCGC
CAGATGGATGGGGTCTTGATCCCACCTGGCGCCACGTTCTCGTTCAACACCACGTTAGGGCCGGTTACCGCTGAGCGCGG
CTTTGTCGAGGGCTATGCGATTATTGATAACCGCACGCAGAAAGAGTGGGGTGGCGGGCTGTGCCAGGTTAGCACTACTG
TCTTTCGGGCAGCCTTCTTTGCCGGCTTACCCATTACTGAACGGCACGCTCATTCCTTTCGTATCGGTTGGTACGAGGAA
CTGGGTGAACCGCCGGGGCTTGATGCTGCAATCTTTACCGGTGTGCACGATCTGCGGTTTGTGAACGACACCGGTGGCTG
GTTACTGTTGACCGGAACCGTGGACACCCGTCGCCAACAACTTACCATAACGCTGTATGGATCGCCGACAAACCGACGGG
TGGAGTATTCATACCGCATCCTGGAACGGATGCCGGCCCCTACCCGCCCTGTCTATATCGATGATCCGACCCTGCCGAGT
GGTGTCGTTCGCCAGACCGACACTGCACGTGATGGTTTACGGGTGGAAATCTACCGTACCGTGTACGCGGACGGTGCCGT
TCATCTCCGGGATACGATCCCAACCACATTCCAACCCTGGCCCGACATCTTCGTGCGCGGTGTGGGGCGGTAG

Upstream 100 bases:

>100_bases
CCACATCACCGTGTCGCCGTGATTCTTTTCGCTTGACATGAACCTGTGCCGGCGTTAGACTACTACTGCATTCTGCCGCA
TCAAAAAGCTGTTCATCGCG

Downstream 100 bases:

>100_bases
GGCTACTGTGCAGTATACCCGGTCTACGAGTAATCCAAAGTATGCGCGCAGTGATGTGCGACTCGTCCTCTTCCCGGCTC
GGCACTGAACTGCTGGGGAA

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MERSLPAGIPHRHRSRFWRIIEWLLVIAVLIILAILLGYGAIILSDRLLAERIYPNISVRGLPIGGMTRAEARAALHRRY
AEFLATPVTLHFNDQVWRPAAEDLGLHLAIEEALDAAFAIGHQSEWEVNAQIAAATWQYGIDLPLHLTFDQRVAQATLQM
IATEIDRAPIDASVDLRGSTVVVGREAWGRQTLIDETLADIAAAVQSLQPQEIAIRTRILEPQVRDSDLAPTVSELRLLL
SGPIQLEGQGGQCRAGCRWEWSLDQIASWIRLRSLTAVDGRPAMAVMIDQAAIRAALTPIAAALREEGGLPRVDWNDGNL
RIRTPGTPGRGLAVEEAMARINAVLYSSERTVTLPLRELPPPVTADNLAALGISAPVGVGVSSFRNSAPYRITNIQAGTR
QMDGVLIPPGATFSFNTTLGPVTAERGFVEGYAIIDNRTQKEWGGGLCQVSTTVFRAAFFAGLPITERHAHSFRIGWYEE
LGEPPGLDAAIFTGVHDLRFVNDTGGWLLLTGTVDTRRQQLTITLYGSPTNRRVEYSYRILERMPAPTRPVYIDDPTLPS
GVVRQTDTARDGLRVEIYRTVYADGAVHLRDTIPTTFQPWPDIFVRGVGR

Sequences:

>Translated_610_residues
MERSLPAGIPHRHRSRFWRIIEWLLVIAVLIILAILLGYGAIILSDRLLAERIYPNISVRGLPIGGMTRAEARAALHRRY
AEFLATPVTLHFNDQVWRPAAEDLGLHLAIEEALDAAFAIGHQSEWEVNAQIAAATWQYGIDLPLHLTFDQRVAQATLQM
IATEIDRAPIDASVDLRGSTVVVGREAWGRQTLIDETLADIAAAVQSLQPQEIAIRTRILEPQVRDSDLAPTVSELRLLL
SGPIQLEGQGGQCRAGCRWEWSLDQIASWIRLRSLTAVDGRPAMAVMIDQAAIRAALTPIAAALREEGGLPRVDWNDGNL
RIRTPGTPGRGLAVEEAMARINAVLYSSERTVTLPLRELPPPVTADNLAALGISAPVGVGVSSFRNSAPYRITNIQAGTR
QMDGVLIPPGATFSFNTTLGPVTAERGFVEGYAIIDNRTQKEWGGGLCQVSTTVFRAAFFAGLPITERHAHSFRIGWYEE
LGEPPGLDAAIFTGVHDLRFVNDTGGWLLLTGTVDTRRQQLTITLYGSPTNRRVEYSYRILERMPAPTRPVYIDDPTLPS
GVVRQTDTARDGLRVEIYRTVYADGAVHLRDTIPTTFQPWPDIFVRGVGR
>Mature_610_residues
MERSLPAGIPHRHRSRFWRIIEWLLVIAVLIILAILLGYGAIILSDRLLAERIYPNISVRGLPIGGMTRAEARAALHRRY
AEFLATPVTLHFNDQVWRPAAEDLGLHLAIEEALDAAFAIGHQSEWEVNAQIAAATWQYGIDLPLHLTFDQRVAQATLQM
IATEIDRAPIDASVDLRGSTVVVGREAWGRQTLIDETLADIAAAVQSLQPQEIAIRTRILEPQVRDSDLAPTVSELRLLL
SGPIQLEGQGGQCRAGCRWEWSLDQIASWIRLRSLTAVDGRPAMAVMIDQAAIRAALTPIAAALREEGGLPRVDWNDGNL
RIRTPGTPGRGLAVEEAMARINAVLYSSERTVTLPLRELPPPVTADNLAALGISAPVGVGVSSFRNSAPYRITNIQAGTR
QMDGVLIPPGATFSFNTTLGPVTAERGFVEGYAIIDNRTQKEWGGGLCQVSTTVFRAAFFAGLPITERHAHSFRIGWYEE
LGEPPGLDAAIFTGVHDLRFVNDTGGWLLLTGTVDTRRQQLTITLYGSPTNRRVEYSYRILERMPAPTRPVYIDDPTLPS
GVVRQTDTARDGLRVEIYRTVYADGAVHLRDTIPTTFQPWPDIFVRGVGR

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 67156; Mature: 67156

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSLPAGIPHRHRSRFWRIIEWLLVIAVLIILAILLGYGAIILSDRLLAERIYPNISVR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE
GLPIGGMTRAEARAALHRRYAEFLATPVTLHFNDQVWRPAAEDLGLHLAIEEALDAAFAI
EECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCEEEEHHHHHHHHHHC
GHQSEWEVNAQIAAATWQYGIDLPLHLTFDQRVAQATLQMIATEIDRAPIDASVDLRGST
CCCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCE
VVVGREAWGRQTLIDETLADIAAAVQSLQPQEIAIRTRILEPQVRDSDLAPTVSELRLLL
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEHHCCCCCCCCCCCCCCHHHHHHHH
SGPIQLEGQGGQCRAGCRWEWSLDQIASWIRLRSLTAVDGRPAMAVMIDQAAIRAALTPI
CCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHHHHHHH
AAALREEGGLPRVDWNDGNLRIRTPGTPGRGLAVEEAMARINAVLYSSERTVTLPLRELP
HHHHHHCCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHEEEECCCEEEEEHHHCC
PPVTADNLAALGISAPVGVGVSSFRNSAPYRITNIQAGTRQMDGVLIPPGATFSFNTTLG
CCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCEEECCCCC
PVTAERGFVEGYAIIDNRTQKEWGGGLCQVSTTVFRAAFFAGLPITERHAHSFRIGWYEE
CCCCCCCCCCEEEEECCCCCHHHCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCHHH
LGEPPGLDAAIFTGVHDLRFVNDTGGWLLLTGTVDTRRQQLTITLYGSPTNRRVEYSYRI
HCCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEHHHHH
LERMPAPTRPVYIDDPTLPSGVVRQTDTARDGLRVEIYRTVYADGAVHLRDTIPTTFQPW
HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCC
PDIFVRGVGR
HHHHHCCCCC
>Mature Secondary Structure
MERSLPAGIPHRHRSRFWRIIEWLLVIAVLIILAILLGYGAIILSDRLLAERIYPNISVR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEE
GLPIGGMTRAEARAALHRRYAEFLATPVTLHFNDQVWRPAAEDLGLHLAIEEALDAAFAI
EECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCEEEEHHHHHHHHHHC
GHQSEWEVNAQIAAATWQYGIDLPLHLTFDQRVAQATLQMIATEIDRAPIDASVDLRGST
CCCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCE
VVVGREAWGRQTLIDETLADIAAAVQSLQPQEIAIRTRILEPQVRDSDLAPTVSELRLLL
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEHHCCCCCCCCCCCCCCHHHHHHHH
SGPIQLEGQGGQCRAGCRWEWSLDQIASWIRLRSLTAVDGRPAMAVMIDQAAIRAALTPI
CCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHHHHHHH
AAALREEGGLPRVDWNDGNLRIRTPGTPGRGLAVEEAMARINAVLYSSERTVTLPLRELP
HHHHHHCCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHEEEECCCEEEEEHHHCC
PPVTADNLAALGISAPVGVGVSSFRNSAPYRITNIQAGTRQMDGVLIPPGATFSFNTTLG
CCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCEEECCCCC
PVTAERGFVEGYAIIDNRTQKEWGGGLCQVSTTVFRAAFFAGLPITERHAHSFRIGWYEE
CCCCCCCCCCEEEEECCCCCHHHCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEECCHHH
LGEPPGLDAAIFTGVHDLRFVNDTGGWLLLTGTVDTRRQQLTITLYGSPTNRRVEYSYRI
HCCCCCCCHHHHCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEHHHHH
LERMPAPTRPVYIDDPTLPSGVVRQTDTARDGLRVEIYRTVYADGAVHLRDTIPTTFQPW
HHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCC
PDIFVRGVGR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]