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The map label for this gene is pufL

Identifier: 222524426

GI number: 222524426

Start: 1457647

End: 1458582

Strand: Reverse

Name: pufL

Synonym: Chy400_1150

Alternate gene names: 222524426

Gene position: 1458582-1457647 (Counterclockwise)

Preceding gene: 222524429

Following gene: 222524425

Centisome position: 27.68

GC content: 54.38

Gene sequence:

>936_bases
ATGAGCAGAGCAAAAGCGAAAGACCCCCGTTTTCCCGACTTTTCGTTCACCGTCGTTGAGGGTGCGCGGGCCACACGAGT
ACCGGGAGGGCGGACGATTGAAGAAATCGAGCCGGAATACAAGATCAAAGGGCGCACAACCTTTAGTGCGATCTTCCGTT
ACGATCCCTTTGATTTCTGGGTAGGGCCGTTCTACGTTGGCTTTTGGGGCTTTGTCTCGGTCATCGGGATCATCTTCGGT
TCGTATTTCTACATCAACGAGACAATCCTCAAAGGTCCCTATTCAATACCGCAAAACTTCTTTGCCGGACGAATTGATCC
CCCGCCACCCGAACTTGGGTTGGGGTTTGCCGCACCGGGTGAACCGGGCTTTGCCTGGCAGATGACCGTCCTCTTTGCGA
CGATTGCTTTCTTCGGCTGGATGATGCGCCAGGTCGATATTAGTATGAAGCTCGATATGGGCTATCACGTTCCGATTGCA
TTCGGGGTTGCATTTTCGGCCTGGTTAGTCCTCCAGGTTATTCGCCCGATAGCCCTCGGTATGTGGCACGAAGGCTTCGT
GCTCGGCATTATGCCCCACCTCGATTGGGTGTCGAATTTTGGCTATCGCTACAATAATTTCTTCTACAATCCGTTCCACG
CTATCGGCATCACCGGACTGTTCGCATCAACCTGGCTGCTGGCCTGCCACGGCTCGCTCATTCTCAGCGCTGCGCAGTAC
CGTGGCCCGGAAGGTGGCGATATTGAGAACGTCTTCTTCCGTGACGTGCAGTACTATTCAGTGGGCGAGTCGGGTGTGCA
CCGATTAGGGTACATCTTCGCGATTGGCGGCATCCTGTCGGCTGATCTGTGCATTTTGCTGTCGGGCTGGCCGGTGCAGG
ATTGGGTAAGCTTCTGGAATTTCTGGAATAATCTGCCCTTCTGGAGCGGCGTCTAG

Upstream 100 bases:

>100_bases
GTAAAATTTTGCTTATCATTACACGTTATCCGAGTCAGGGCAACCGTAAGGCGCGATGTGAGAACGGTCGCCGCGCCAAC
CGTCAGCAGAGGGAGTCGCT

Downstream 100 bases:

>100_bases
AGAGGAGCACACTGGTATGGCGACAATCAATATGACGCCGGGCGATCTGGAACTGGGTCGTGATCGCGGTCGGATCGGAA
AACCAATTGAGATTCCGCTC

Product: photosynthetic reaction center subunit L

Products: NA

Alternate protein names: Photosynthetic reaction center L subunit

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSRAKAKDPRFPDFSFTVVEGARATRVPGGRTIEEIEPEYKIKGRTTFSAIFRYDPFDFWVGPFYVGFWGFVSVIGIIFG
SYFYINETILKGPYSIPQNFFAGRIDPPPPELGLGFAAPGEPGFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIA
FGVAFSAWLVLQVIRPIALGMWHEGFVLGIMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFASTWLLACHGSLILSAAQY
RGPEGGDIENVFFRDVQYYSVGESGVHRLGYIFAIGGILSADLCILLSGWPVQDWVSFWNFWNNLPFWSGV

Sequences:

>Translated_311_residues
MSRAKAKDPRFPDFSFTVVEGARATRVPGGRTIEEIEPEYKIKGRTTFSAIFRYDPFDFWVGPFYVGFWGFVSVIGIIFG
SYFYINETILKGPYSIPQNFFAGRIDPPPPELGLGFAAPGEPGFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIA
FGVAFSAWLVLQVIRPIALGMWHEGFVLGIMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFASTWLLACHGSLILSAAQY
RGPEGGDIENVFFRDVQYYSVGESGVHRLGYIFAIGGILSADLCILLSGWPVQDWVSFWNFWNNLPFWSGV
>Mature_310_residues
SRAKAKDPRFPDFSFTVVEGARATRVPGGRTIEEIEPEYKIKGRTTFSAIFRYDPFDFWVGPFYVGFWGFVSVIGIIFGS
YFYINETILKGPYSIPQNFFAGRIDPPPPELGLGFAAPGEPGFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIAF
GVAFSAWLVLQVIRPIALGMWHEGFVLGIMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFASTWLLACHGSLILSAAQYR
GPEGGDIENVFFRDVQYYSVGESGVHRLGYIFAIGGILSADLCILLSGWPVQDWVSFWNFWNNLPFWSGV

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RCEL_CHLAA (P11695)

Other databases:

- EMBL:   X14979
- EMBL:   CP000909
- PIR:   S03566
- RefSeq:   YP_001634673.1
- ProteinModelPortal:   P11695
- SMR:   P11695
- GeneID:   5825853
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_1052
- HOGENOM:   HBG361251
- OMA:   WGHGFPY
- ProtClustDB:   PRK14506
- GO:   GO:0006810
- InterPro:   IPR005871
- InterPro:   IPR000484
- Gene3D:   G3DSA:1.20.85.10
- PRINTS:   PR00256
- TIGRFAMs:   TIGR01157

Pfam domain/function: PF00124 Photo_RC; SSF81483 Photo_RC_L/M

EC number: NA

Molecular weight: Translated: 35148; Mature: 35017

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00244 REACTION_CENTER

Important sites: BINDING 253-253

Signals:

None

Transmembrane regions:

HASH(0x202a741c)-; HASH(0x1fce1e7c)-; HASH(0x201f1f30)-; HASH(0x1fe791fc)-; HASH(0x20442878)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAKAKDPRFPDFSFTVVEGARATRVPGGRTIEEIEPEYKIKGRTTFSAIFRYDPFDFW
CCCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHCCCCEEECCCEEEEHHEECCCHHHH
VGPFYVGFWGFVSVIGIIFGSYFYINETILKGPYSIPQNFFAGRIDPPPPELGLGFAAPG
HHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
EPGFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIAFGVAFSAWLVLQVIRPIALG
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
MWHEGFVLGIMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFASTWLLACHGSLILSAAQY
CCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGPEGGDIENVFFRDVQYYSVGESGVHRLGYIFAIGGILSADLCILLSGWPVQDWVSFWN
CCCCCCCCCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHCHHEEECCCCHHHHHHHHH
FWNNLPFWSGV
HHCCCCCCCCH
>Mature Secondary Structure 
SRAKAKDPRFPDFSFTVVEGARATRVPGGRTIEEIEPEYKIKGRTTFSAIFRYDPFDFW
CCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHCCCCEEECCCEEEEHHEECCCHHHH
VGPFYVGFWGFVSVIGIIFGSYFYINETILKGPYSIPQNFFAGRIDPPPPELGLGFAAPG
HHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
EPGFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIAFGVAFSAWLVLQVIRPIALG
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
MWHEGFVLGIMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFASTWLLACHGSLILSAAQY
CCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGPEGGDIENVFFRDVQYYSVGESGVHRLGYIFAIGGILSADLCILLSGWPVQDWVSFWN
CCCCCCCCCHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHCHHEEECCCCHHHHHHHHH
FWNNLPFWSGV
HHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2834225; 2651125