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The map label for this gene is pufM

Identifier: 222524425

GI number: 222524425

Start: 1456707

End: 1457630

Strand: Reverse

Name: pufM

Synonym: Chy400_1149

Alternate gene names: 222524425

Gene position: 1457630-1456707 (Counterclockwise)

Preceding gene: 222524426

Following gene: 222524423

Centisome position: 27.66

GC content: 54.44

Gene sequence:

>924_bases
ATGGCGACAATCAATATGACGCCGGGCGATCTGGAACTGGGTCGTGATCGCGGTCGGATCGGAAAACCAATTGAGATTCC
GCTCCTGGAAAACTTCGGCTTCGATAGCCAGCTCGGCCCGTTCTATCTCGGCTTTTGGAACGCAGTGGCTTACATCACCG
GTGGTATCTTTACCTTTATCTGGCTGATGGTGATGTTTGCTCAGGTGAATTACAATCCGGTGGCCTTTGCCAAGTACTTT
GTGGTCTTGCAAATCGATCCGCCGTCATCACGCTATGGCCTGAGCTTTCCGCCGCTGAATGAGGGTGGATGGTGGCTCAT
CGCGACCTTCTTCCTGACGGTCTCGATCTTCGCGTGGTATATGCACATCTATACCCGCGCCAAGGCGCTCGGGATTAAGC
CCTACCTGGCTTACGGCTTCACCGGTGCGATTGCGCTCTACCTGGTGATCTATATCATTCGTCCGGTGTGGATGGGTGAT
TGGTCGGAAGCGCCGGCCCACGGCATCAAAGCGCTGCTCGACTGGACGAATAATGTGAGCGTGCGTTACGGCAATTTCTA
CTACAATCCGTTCCACATGCTCTCGATCTTCTTCTTGCTCGGATCAACGTTGTTGCTGGCGATGCACGCCGGTACCATTT
GGGCACTCGAAAAGTACGCTGCCCACGAGGAATGGAATGAGATTCAGGCTCCCGGTACCGGTACCGAGCGTGCTCAGCTC
TTCTGGCGCTGGTGCATGGGCTTTAACGCGAATGCCTACTCGATCCACCTGTGGGCATTCTGGTTCGCCTGGTTGTGCGG
TATTACCGGTGCATTGGGTGTCTTCTTCTCAATGCCCGATTTTGTCAATAACTGGTTCCAATGGGGTATTGAAGCCGGCA
TCAACTATCCGCAAGGTCCAACGCCACCGGTTTCACTGCCGTAG

Upstream 100 bases:

>100_bases
ATTTTGCTGTCGGGCTGGCCGGTGCAGGATTGGGTAAGCTTCTGGAATTTCTGGAATAATCTGCCCTTCTGGAGCGGCGT
CTAGAGAGGAGCACACTGGT

Downstream 100 bases:

>100_bases
CGTTCGTGACACTTCTCTACCTTCCTCCCGGCCTCTCGCCCGTCATCAGACGGGCGAGAGGTTGTTTATTGCACGGGGAG
AGGTGACTATCTGAAGACTG

Product: photosynthetic reaction center subunit M

Products: NA

Alternate protein names: Photosynthetic reaction center M subunit

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MATINMTPGDLELGRDRGRIGKPIEIPLLENFGFDSQLGPFYLGFWNAVAYITGGIFTFIWLMVMFAQVNYNPVAFAKYF
VVLQIDPPSSRYGLSFPPLNEGGWWLIATFFLTVSIFAWYMHIYTRAKALGIKPYLAYGFTGAIALYLVIYIIRPVWMGD
WSEAPAHGIKALLDWTNNVSVRYGNFYYNPFHMLSIFFLLGSTLLLAMHAGTIWALEKYAAHEEWNEIQAPGTGTERAQL
FWRWCMGFNANAYSIHLWAFWFAWLCGITGALGVFFSMPDFVNNWFQWGIEAGINYPQGPTPPVSLP

Sequences:

>Translated_307_residues
MATINMTPGDLELGRDRGRIGKPIEIPLLENFGFDSQLGPFYLGFWNAVAYITGGIFTFIWLMVMFAQVNYNPVAFAKYF
VVLQIDPPSSRYGLSFPPLNEGGWWLIATFFLTVSIFAWYMHIYTRAKALGIKPYLAYGFTGAIALYLVIYIIRPVWMGD
WSEAPAHGIKALLDWTNNVSVRYGNFYYNPFHMLSIFFLLGSTLLLAMHAGTIWALEKYAAHEEWNEIQAPGTGTERAQL
FWRWCMGFNANAYSIHLWAFWFAWLCGITGALGVFFSMPDFVNNWFQWGIEAGINYPQGPTPPVSLP
>Mature_306_residues
ATINMTPGDLELGRDRGRIGKPIEIPLLENFGFDSQLGPFYLGFWNAVAYITGGIFTFIWLMVMFAQVNYNPVAFAKYFV
VLQIDPPSSRYGLSFPPLNEGGWWLIATFFLTVSIFAWYMHIYTRAKALGIKPYLAYGFTGAIALYLVIYIIRPVWMGDW
SEAPAHGIKALLDWTNNVSVRYGNFYYNPFHMLSIFFLLGSTLLLAMHAGTIWALEKYAAHEEWNEIQAPGTGTERAQLF
WRWCMGFNANAYSIHLWAFWFAWLCGITGALGVFFSMPDFVNNWFQWGIEAGINYPQGPTPPVSLP

Specific function: The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RCEM_CHLAA (P09438)

Other databases:

- EMBL:   X07847
- EMBL:   X14979
- EMBL:   CP000909
- PIR:   S03567
- RefSeq:   YP_001634672.1
- ProteinModelPortal:   P09438
- SMR:   P09438
- GeneID:   5825852
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_1051
- HOGENOM:   HBG361250
- OMA:   GIFPHLD
- ProtClustDB:   PRK14504
- GO:   GO:0006810
- InterPro:   IPR000484
- InterPro:   IPR005781
- Gene3D:   G3DSA:1.20.85.10
- PRINTS:   PR00256
- TIGRFAMs:   TIGR01115

Pfam domain/function: PF00124 Photo_RC; SSF81483 Photo_RC_L/M

EC number: NA

Molecular weight: Translated: 34967; Mature: 34836

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ea46480)-; HASH(0x1dde2ce8)-; HASH(0x1fd62060)-; HASH(0x202ff828)-; HASH(0x203f9774)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATINMTPGDLELGRDRGRIGKPIEIPLLENFGFDSQLGPFYLGFWNAVAYITGGIFTFI
CCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WLMVMFAQVNYNPVAFAKYFVVLQIDPPSSRYGLSFPPLNEGGWWLIATFFLTVSIFAWY
HHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MHIYTRAKALGIKPYLAYGFTGAIALYLVIYIIRPVWMGDWSEAPAHGIKALLDWTNNVS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE
VRYGNFYYNPFHMLSIFFLLGSTLLLAMHAGTIWALEKYAAHEEWNEIQAPGTGTERAQL
EEECCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FWRWCMGFNANAYSIHLWAFWFAWLCGITGALGVFFSMPDFVNNWFQWGIEAGINYPQGP
HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
TPPVSLP
CCCCCCH
>Mature Secondary Structure 
ATINMTPGDLELGRDRGRIGKPIEIPLLENFGFDSQLGPFYLGFWNAVAYITGGIFTFI
CEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WLMVMFAQVNYNPVAFAKYFVVLQIDPPSSRYGLSFPPLNEGGWWLIATFFLTVSIFAWY
HHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MHIYTRAKALGIKPYLAYGFTGAIALYLVIYIIRPVWMGDWSEAPAHGIKALLDWTNNVS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE
VRYGNFYYNPFHMLSIFFLLGSTLLLAMHAGTIWALEKYAAHEEWNEIQAPGTGTERAQL
EEECCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FWRWCMGFNANAYSIHLWAFWFAWLCGITGALGVFFSMPDFVNNWFQWGIEAGINYPQGP
HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
TPPVSLP
CCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3288502; 2651125