| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524390
Identifier: 222524390
GI number: 222524390
Start: 1412125
End: 1412802
Strand: Direct
Name: 222524390
Synonym: Chy400_1114
Alternate gene names: NA
Gene position: 1412125-1412802 (Clockwise)
Preceding gene: 222524389
Following gene: 222524391
Centisome position: 26.8
GC content: 55.75
Gene sequence:
>678_bases GTGAAGCGGCTCGATTGGGGAAAAACCGGTCAGTCGATGACTGAAATTACCATTCTGTTGGCACTGGTGGCAGCAGTAGC GATTTCCGGCTTAATGCTCACCGGTGAAGGCACCCGTGATGCGCTCTGTCGGGCAGCAAGTGCGTTCGGGAGCACCTGTG GCGATCTGTTTCGCGACGATTTTTCCAATCTCAATAACTGGACTATTCAGAACGGACGCTGGCAAATTCGTGAGGGACGC CTTTGCATCGATGGGCCAGGGCGGATCTATCGCTCATTTGATCGCAGTGACTACGTGATCGATGTCAGCCTGGCCCGTCT GACCAGAGGGAATGGCTATGGCCTCTTCTTCCGCGACTCGGGTGGGCCAAAATTCAATGGCTACTCGTTCCAGTATGATC CGGGCTACGGGCGAGGGGCATTCATCATTCGCAAGTGGATCAATGGTAATGAGCTGGCAGTGCCGATTGCCCGCGTAGAG GCACCCGCCGGCTACGATTGGTATGGCTCAGATCGCACAGTGCGCCTGGAGGTACGCGGGAATACATTTGTTGCCTCTGT CGATGGTCAACCGGTTGTTCAGGCGCGTGATAGCAGTTTTAATCAAGGCGGTATCGGCTTCCGCAGTTGGGATGCATCGA GTGCCTGCTTCGATGATGTGAGTGTGCGCAGGCCGTGA
Upstream 100 bases:
>100_bases AGAGCACATTTCACAGTAATCGGGTACAGGTCTGGCCATCACGCATCTGACAGCATCGTGACATTCCCTTCACAGCACAA CCATGAAAGGAGTGGGTGTC
Downstream 100 bases:
>100_bases GGACGTGGCAATGTTCTCGAAGGTGGCATTATGACCGACGAACAGCGATCATCACAACCGCCACAGGGGCAATTTGATCC CGATTACTATGTGCAATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKRLDWGKTGQSMTEITILLALVAAVAISGLMLTGEGTRDALCRAASAFGSTCGDLFRDDFSNLNNWTIQNGRWQIREGR LCIDGPGRIYRSFDRSDYVIDVSLARLTRGNGYGLFFRDSGGPKFNGYSFQYDPGYGRGAFIIRKWINGNELAVPIARVE APAGYDWYGSDRTVRLEVRGNTFVASVDGQPVVQARDSSFNQGGIGFRSWDASSACFDDVSVRRP
Sequences:
>Translated_225_residues MKRLDWGKTGQSMTEITILLALVAAVAISGLMLTGEGTRDALCRAASAFGSTCGDLFRDDFSNLNNWTIQNGRWQIREGR LCIDGPGRIYRSFDRSDYVIDVSLARLTRGNGYGLFFRDSGGPKFNGYSFQYDPGYGRGAFIIRKWINGNELAVPIARVE APAGYDWYGSDRTVRLEVRGNTFVASVDGQPVVQARDSSFNQGGIGFRSWDASSACFDDVSVRRP >Mature_225_residues MKRLDWGKTGQSMTEITILLALVAAVAISGLMLTGEGTRDALCRAASAFGSTCGDLFRDDFSNLNNWTIQNGRWQIREGR LCIDGPGRIYRSFDRSDYVIDVSLARLTRGNGYGLFFRDSGGPKFNGYSFQYDPGYGRGAFIIRKWINGNELAVPIARVE APAGYDWYGSDRTVRLEVRGNTFVASVDGQPVVQARDSSFNQGGIGFRSWDASSACFDDVSVRRP
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24841; Mature: 24841
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLDWGKTGQSMTEITILLALVAAVAISGLMLTGEGTRDALCRAASAFGSTCGDLFRDD CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH FSNLNNWTIQNGRWQIREGRLCIDGPGRIYRSFDRSDYVIDVSLARLTRGNGYGLFFRDS HCCCCCEEEECCEEEEECCCEEECCCCHHHCCCCCCCEEEEEEEEEEECCCCEEEEEECC GGPKFNGYSFQYDPGYGRGAFIIRKWINGNELAVPIARVEAPAGYDWYGSDRTVRLEVRG CCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCEECCCCEEEEEECC NTFVASVDGQPVVQARDSSFNQGGIGFRSWDASSACFDDVSVRRP CEEEEECCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRLDWGKTGQSMTEITILLALVAAVAISGLMLTGEGTRDALCRAASAFGSTCGDLFRDD CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH FSNLNNWTIQNGRWQIREGRLCIDGPGRIYRSFDRSDYVIDVSLARLTRGNGYGLFFRDS HCCCCCEEEECCEEEEECCCEEECCCCHHHCCCCCCCEEEEEEEEEEECCCCEEEEEECC GGPKFNGYSFQYDPGYGRGAFIIRKWINGNELAVPIARVEAPAGYDWYGSDRTVRLEVRG CCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCEECCCCEEEEEECC NTFVASVDGQPVVQARDSSFNQGGIGFRSWDASSACFDDVSVRRP CEEEEECCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA