| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524391
Identifier: 222524391
GI number: 222524391
Start: 1412833
End: 1413285
Strand: Direct
Name: 222524391
Synonym: Chy400_1115
Alternate gene names: NA
Gene position: 1412833-1413285 (Clockwise)
Preceding gene: 222524390
Following gene: 222524393
Centisome position: 26.81
GC content: 56.07
Gene sequence:
>453_bases ATGACCGACGAACAGCGATCATCACAACCGCCACAGGGGCAATTTGATCCCGATTACTATGTGCAATGGCAACCACCGGT TATTCCACCAGGCCAGGGACGACGAGTGGTGCGGATCGCGATTGTCTTCTTGAGCGGTGTGCTGGTACTTATCGCTTTGA TTGCACTCTGGCGGAGTAATCTGATAGCTCTGCCCGGTGGTCGGGGTGATATTGTGGGGCGAGTAGCAGCACCGGCCGAG GGAGCAGTGGTCTTTACCGGGACAGATTTCACTGAAATTCCGGTTGCAGCGGATGGCAGTTTCATCGTGCGTGGTGTGCC TTCAGGACGGCAAATACTCTACGTTGCGTTTGCCGGCACGGCCTGGGAAGTTGCGGTTGACGTGCCCAATCAGGGAACGG TTGATGTGGGTGTAATTACGGTTCAGCCAACTGCCGAACCGGTGCAGCGGTAA
Upstream 100 bases:
>100_bases CGGTATCGGCTTCCGCAGTTGGGATGCATCGAGTGCCTGCTTCGATGATGTGAGTGTGCGCAGGCCGTGAGGACGTGGCA ATGTTCTCGAAGGTGGCATT
Downstream 100 bases:
>100_bases ACAGGTGGTGCGGTCGCTAATCGGCACTGATAACTATAACTATCAACCTCATAGAGCGAACGCACTACTGATCACGATTG TCGTTTCGTTGGACGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTDEQRSSQPPQGQFDPDYYVQWQPPVIPPGQGRRVVRIAIVFLSGVLVLIALIALWRSNLIALPGGRGDIVGRVAAPAE GAVVFTGTDFTEIPVAADGSFIVRGVPSGRQILYVAFAGTAWEVAVDVPNQGTVDVGVITVQPTAEPVQR
Sequences:
>Translated_150_residues MTDEQRSSQPPQGQFDPDYYVQWQPPVIPPGQGRRVVRIAIVFLSGVLVLIALIALWRSNLIALPGGRGDIVGRVAAPAE GAVVFTGTDFTEIPVAADGSFIVRGVPSGRQILYVAFAGTAWEVAVDVPNQGTVDVGVITVQPTAEPVQR >Mature_149_residues TDEQRSSQPPQGQFDPDYYVQWQPPVIPPGQGRRVVRIAIVFLSGVLVLIALIALWRSNLIALPGGRGDIVGRVAAPAEG AVVFTGTDFTEIPVAADGSFIVRGVPSGRQILYVAFAGTAWEVAVDVPNQGTVDVGVITVQPTAEPVQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15946; Mature: 15815
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEQRSSQPPQGQFDPDYYVQWQPPVIPPGQGRRVVRIAIVFLSGVLVLIALIALWRSN CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC LIALPGGRGDIVGRVAAPAEGAVVFTGTDFTEIPVAADGSFIVRGVPSGRQILYVAFAGT EEEECCCCCCEEEEEECCCCCEEEEECCCCCCCEEECCCCEEEEECCCCCEEEEEEECCC AWEVAVDVPNQGTVDVGVITVQPTAEPVQR EEEEEEECCCCCCEEEEEEEECCCHHHHCC >Mature Secondary Structure TDEQRSSQPPQGQFDPDYYVQWQPPVIPPGQGRRVVRIAIVFLSGVLVLIALIALWRSN CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCC LIALPGGRGDIVGRVAAPAEGAVVFTGTDFTEIPVAADGSFIVRGVPSGRQILYVAFAGT EEEECCCCCCEEEEEECCCCCEEEEECCCCCCCEEECCCCEEEEECCCCCEEEEEEECCC AWEVAVDVPNQGTVDVGVITVQPTAEPVQR EEEEEEECCCCCCEEEEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA