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The map label for this gene is yfbE [C]

Identifier: 222524309

GI number: 222524309

Start: 1313605

End: 1314771

Strand: Reverse

Name: yfbE [C]

Synonym: Chy400_1032

Alternate gene names: 222524309

Gene position: 1314771-1313605 (Counterclockwise)

Preceding gene: 222524310

Following gene: 222524308

Centisome position: 24.95

GC content: 55.61

Gene sequence:

>1167_bases
GTGTCAGTTCCAATGTCAGCACCGGATATTACCGAGGCCGAGATACAGGCAGTACAGCAGGTACTGCATACCAGTTATCT
GAGCATTGGCCCACAAATCAAGGCGTTTGAACAGGCAATGGCCGATTATGTTGGACTACCGCACGCGGTGGGCGTCAATT
CCGGTACCAGTGGATTGCATCTGTGCTGTATTGCAACCGGTGCCCGTGATGGCGACCTGGTCATTACAACACCCTTCTCA
TTTATCGCCTCGGCCAATAGCATTCTTTACGAGCGAGCAATTCCAATCTTCGTTGATGTTGATCCGGTTACCGGAAACAT
CGATCCACAGCTTGTGGCTGAGGCTGCATCTGATCTCATGCGCGGTGGCACTGCTGCCCGGCGCTGGCTGCCTCGGCGTC
ACAACACGCTCGGTATACTTAGAGCGATCATGCCGGTTCACGCCTTTGGGCAACCCGCCGATATGGATCCGATCAATGCC
GTAGCTGCCGAATATGGACTACACGTTATCGAAGATGCCTGTGAAGCGATTGGGTCAATGTACAAAGGGCGTATGGCGGG
CACCCTCAGCGATGCCGCCGTCTTTGCCTTTTACCCAAATAAGCAGATGACAACCGGCGAAGGCGGAATGATTGTTACCC
ACCGTGATGATTGGGCCAGCCTGTTCCGCTCACTCCGCAACCAGGGGCGCGATGTCTTTGATGCCTGGCTCAACCACACT
CGTCTGGGCTACAACTATCGCCTCGACGAAATGAGTGCAGCGTTGGGAGTTGTGCAGCTACAGCGGATCGAGGAACTTAT
CGCCCGTCGTGCGCAGGTGGCCGCCTGGTACAACGAACAACTGGCCGACCTCGAACTGGTCGAACGCCCGCAACTAAGCC
CACATACCACCCGGATGAGCTGGTTTGTGTATGTGATCCGTATTTTGCCACCCGCCGACCGCAATACGGTTATGCGCCGG
CTGGCAGATGCCGGTATTCCGAGCCGTCCGTACTTCACACCGATCCACCTCCAACCCTTCTATCGAGAACAGTTCGGGTA
CCAACCGGGTGATTTTCCGGTCACGGAGCGGCTTGGTAACCTTTCGCTGGCATTGCCCTTCTCCAGCGTGATGCGTGAAG
AGCAGGTCACTGAAGTTGTTCATCATCTGCGTGCTGCACTGCAATGA

Upstream 100 bases:

>100_bases
GGCTGTCGGCGAATAACGGTCGATCTGCACAGCTCCAGTTGGAGCAACCGTCAGTGTTGTGTGTGTTCAAGTTTTACGCG
ATATACCAGGGGAGTTGAGC

Downstream 100 bases:

>100_bases
GTGTTAGCGGTATTGGTGAATAACGAACATAGGCTTTCTAACAAGATTTTCATCACCTTTCGTCATTCACCACATCTTTT
GTTCACCTACACTCAGTAGC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSVPMSAPDITEAEIQAVQQVLHTSYLSIGPQIKAFEQAMADYVGLPHAVGVNSGTSGLHLCCIATGARDGDLVITTPFS
FIASANSILYERAIPIFVDVDPVTGNIDPQLVAEAASDLMRGGTAARRWLPRRHNTLGILRAIMPVHAFGQPADMDPINA
VAAEYGLHVIEDACEAIGSMYKGRMAGTLSDAAVFAFYPNKQMTTGEGGMIVTHRDDWASLFRSLRNQGRDVFDAWLNHT
RLGYNYRLDEMSAALGVVQLQRIEELIARRAQVAAWYNEQLADLELVERPQLSPHTTRMSWFVYVIRILPPADRNTVMRR
LADAGIPSRPYFTPIHLQPFYREQFGYQPGDFPVTERLGNLSLALPFSSVMREEQVTEVVHHLRAALQ

Sequences:

>Translated_388_residues
MSVPMSAPDITEAEIQAVQQVLHTSYLSIGPQIKAFEQAMADYVGLPHAVGVNSGTSGLHLCCIATGARDGDLVITTPFS
FIASANSILYERAIPIFVDVDPVTGNIDPQLVAEAASDLMRGGTAARRWLPRRHNTLGILRAIMPVHAFGQPADMDPINA
VAAEYGLHVIEDACEAIGSMYKGRMAGTLSDAAVFAFYPNKQMTTGEGGMIVTHRDDWASLFRSLRNQGRDVFDAWLNHT
RLGYNYRLDEMSAALGVVQLQRIEELIARRAQVAAWYNEQLADLELVERPQLSPHTTRMSWFVYVIRILPPADRNTVMRR
LADAGIPSRPYFTPIHLQPFYREQFGYQPGDFPVTERLGNLSLALPFSSVMREEQVTEVVHHLRAALQ
>Mature_387_residues
SVPMSAPDITEAEIQAVQQVLHTSYLSIGPQIKAFEQAMADYVGLPHAVGVNSGTSGLHLCCIATGARDGDLVITTPFSF
IASANSILYERAIPIFVDVDPVTGNIDPQLVAEAASDLMRGGTAARRWLPRRHNTLGILRAIMPVHAFGQPADMDPINAV
AAEYGLHVIEDACEAIGSMYKGRMAGTLSDAAVFAFYPNKQMTTGEGGMIVTHRDDWASLFRSLRNQGRDVFDAWLNHTR
LGYNYRLDEMSAALGVVQLQRIEELIARRAQVAAWYNEQLADLELVERPQLSPHTTRMSWFVYVIRILPPADRNTVMRRL
ADAGIPSRPYFTPIHLQPFYREQFGYQPGDFPVTERLGNLSLALPFSSVMREEQVTEVVHHLRAALQ

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=358, Percent_Identity=33.5195530726257, Blast_Score=177, Evalue=9e-46,
Organism=Escherichia coli, GI2367285, Length=375, Percent_Identity=25.8666666666667, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43018; Mature: 42886

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPMSAPDITEAEIQAVQQVLHTSYLSIGPQIKAFEQAMADYVGLPHAVGVNSGTSGLH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCCCEE
LCCIATGARDGDLVITTPFSFIASANSILYERAIPIFVDVDPVTGNIDPQLVAEAASDLM
EEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH
RGGTAARRWLPRRHNTLGILRAIMPVHAFGQPADMDPINAVAAEYGLHVIEDACEAIGSM
HCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YKGRMAGTLSDAAVFAFYPNKQMTTGEGGMIVTHRDDWASLFRSLRNQGRDVFDAWLNHT
HCCCCCCCCCCCEEEEEECCCCEECCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHCCC
RLGYNYRLDEMSAALGVVQLQRIEELIARRAQVAAWYNEQLADLELVERPQLSPHTTRMS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WFVYVIRILPPADRNTVMRRLADAGIPSRPYFTPIHLQPFYREQFGYQPGDFPVTERLGN
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHCC
LSLALPFSSVMREEQVTEVVHHLRAALQ
EEEECCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVPMSAPDITEAEIQAVQQVLHTSYLSIGPQIKAFEQAMADYVGLPHAVGVNSGTSGLH
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCCCEE
LCCIATGARDGDLVITTPFSFIASANSILYERAIPIFVDVDPVTGNIDPQLVAEAASDLM
EEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH
RGGTAARRWLPRRHNTLGILRAIMPVHAFGQPADMDPINAVAAEYGLHVIEDACEAIGSM
HCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YKGRMAGTLSDAAVFAFYPNKQMTTGEGGMIVTHRDDWASLFRSLRNQGRDVFDAWLNHT
HCCCCCCCCCCCEEEEEECCCCEECCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHCCC
RLGYNYRLDEMSAALGVVQLQRIEELIARRAQVAAWYNEQLADLELVERPQLSPHTTRMS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WFVYVIRILPPADRNTVMRRLADAGIPSRPYFTPIHLQPFYREQFGYQPGDFPVTERLGN
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHHCC
LSLALPFSSVMREEQVTEVVHHLRAALQ
EEEECCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]