Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222524288

Identifier: 222524288

GI number: 222524288

Start: 1288564

End: 1289280

Strand: Direct

Name: 222524288

Synonym: Chy400_1011

Alternate gene names: NA

Gene position: 1288564-1289280 (Clockwise)

Preceding gene: 222524287

Following gene: 222524292

Centisome position: 24.46

GC content: 60.25

Gene sequence:

>717_bases
ATGACAACCCTGTCGCCTTCACCATCTGAATTACCTGAGCATGATCGTGAATTGCTCTCGGCATATATAGATAACGAACT
AACGCCTGCCGAGCGATCTGCGCTCGAACAGCGGTTGCGCGCCGAGCCATCGTTACGCCGTGAACTGGCCGAACTGCGTG
CGGTTCGCGACCTCCTCCGTGAACAGCCATGGGTAACGCCACCACGCACGTTTACGCTGACTCCTGAGATGGCTGGCGTG
CGTCGGCGCCGGTTTTCCTTGTCTGGCTGGTGGCAGCCGCTCAGCGGCCTGGCTGCGCTGGTGTTGGTCATTCTCATAAG
CTGGCAGATGCTGGGGCTGAATAACAATTCAGCCAGCACTCCGCAAGCCATGATGAGTGGTGACACTACAGCACCCACCG
CCCCCGCCTTTGCCGCTGCGCTACCTGAGTCGCCCGTTGCTGAAAACGCTCCTGCCATCGCCGCCAGTCCAAATGAGGTT
GAGCAAGCAGAACCGACGTCTGAAGCGGCATTGAGTGCGATGGCTGAGCCAACGTTACCGGCAGGCGCTGCTGCCCGCGA
GTCGCAGGCTGTTGAACCAGACGGTTCAGCAGGTGCGCAGTCGCAACCTGCCCAAAGCCCTCCACTTGCTCCGCCGTCCT
GGCCGGTAGTGATTGCCCTGGCTATCTTGCTCCTGATTGTGGCCGGTATCTGGTTTGTCCGCCGACGGGCTGAATAG

Upstream 100 bases:

>100_bases
GCGATATTCTCCGCGCCGGGGAACTCTTACCGTTAAAATTTCGTCTTGATGATGAAACAACCACGTAACAGTTACACCTG
ATGGTTACACGAGTACGCTG

Downstream 100 bases:

>100_bases
ACTATACAGCGCCATGCGCCCGGTTCACCACATAACCCGGCTTGAACAGGATACAGGCCACTTCTTAATTCGCCTGTTCC
AGCGGTAGATTTGCCGTCAC

Product: putative transmembrane anti-sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTTLSPSPSELPEHDRELLSAYIDNELTPAERSALEQRLRAEPSLRRELAELRAVRDLLREQPWVTPPRTFTLTPEMAGV
RRRRFSLSGWWQPLSGLAALVLVILISWQMLGLNNNSASTPQAMMSGDTTAPTAPAFAAALPESPVAENAPAIAASPNEV
EQAEPTSEAALSAMAEPTLPAGAAARESQAVEPDGSAGAQSQPAQSPPLAPPSWPVVIALAILLLIVAGIWFVRRRAE

Sequences:

>Translated_238_residues
MTTLSPSPSELPEHDRELLSAYIDNELTPAERSALEQRLRAEPSLRRELAELRAVRDLLREQPWVTPPRTFTLTPEMAGV
RRRRFSLSGWWQPLSGLAALVLVILISWQMLGLNNNSASTPQAMMSGDTTAPTAPAFAAALPESPVAENAPAIAASPNEV
EQAEPTSEAALSAMAEPTLPAGAAARESQAVEPDGSAGAQSQPAQSPPLAPPSWPVVIALAILLLIVAGIWFVRRRAE
>Mature_237_residues
TTLSPSPSELPEHDRELLSAYIDNELTPAERSALEQRLRAEPSLRRELAELRAVRDLLREQPWVTPPRTFTLTPEMAGVR
RRRFSLSGWWQPLSGLAALVLVILISWQMLGLNNNSASTPQAMMSGDTTAPTAPAFAAALPESPVAENAPAIAASPNEVE
QAEPTSEAALSAMAEPTLPAGAAARESQAVEPDGSAGAQSQPAQSPPLAPPSWPVVIALAILLLIVAGIWFVRRRAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25461; Mature: 25330

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSPSPSELPEHDRELLSAYIDNELTPAERSALEQRLRAEPSLRRELAELRAVRDLLR
CCCCCCCHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EQPWVTPPRTFTLTPEMAGVRRRRFSLSGWWQPLSGLAALVLVILISWQMLGLNNNSAST
HCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PQAMMSGDTTAPTAPAFAAALPESPVAENAPAIAASPNEVEQAEPTSEAALSAMAEPTLP
CHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCC
AGAAARESQAVEPDGSAGAQSQPAQSPPLAPPSWPVVIALAILLLIVAGIWFVRRRAE
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTLSPSPSELPEHDRELLSAYIDNELTPAERSALEQRLRAEPSLRRELAELRAVRDLLR
CCCCCCHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EQPWVTPPRTFTLTPEMAGVRRRRFSLSGWWQPLSGLAALVLVILISWQMLGLNNNSAST
HCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PQAMMSGDTTAPTAPAFAAALPESPVAENAPAIAASPNEVEQAEPTSEAALSAMAEPTLP
CHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCC
AGAAARESQAVEPDGSAGAQSQPAQSPPLAPPSWPVVIALAILLLIVAGIWFVRRRAE
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA