| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is braC [H]
Identifier: 222524292
GI number: 222524292
Start: 1291998
End: 1294433
Strand: Direct
Name: braC [H]
Synonym: Chy400_1015
Alternate gene names: 222524292
Gene position: 1291998-1294433 (Clockwise)
Preceding gene: 222524288
Following gene: 222524293
Centisome position: 24.52
GC content: 61.95
Gene sequence:
>2436_bases ATGAAGCGTTCGATCAGTTTCTTACTGCTGGTCGGTATGCTGGCTTCGATGCTGGCCGCCTGTGGTGCACCGCAGGCTCA GCCTACAGCCACACCGCAGCCAGCACCGCAGGCCACTGAAGCACCGCAGCCGACGGCTGCACCAACCGAACCACCTGCGG CTCAGGTGATCAAGATTGCCACCCAAAGCCCCTTGTCGGGTGGTCAGGCTGCGCTCGGTACCGGTATGAAGAATGCCGCC GAGCTGGCCGTGCAGCAGTTGTCTGGCCCGCTTACTGAGCTGGGCTTCCGCGTTGAACTGGCTCCATTCGATGACCAGGC CCGGCCAGAGGTTGGCTCGGCCAACGCCAAGAATATCGTCTCGGATCAGGATATTCTCTGCGTCGTTGGTCACCTCAATT CGGGTGTCGCCCTGGCTGCGCTGCCCGACTACAAGAATGCCAGCCTGCCGATGGTCTCACCGGCGAACACCAACCCGAAC ATCACCGAGGGTGGCTATGAAGTCGCCTTCCGCGTCGTCGGACGTGACGACGTGCAGGGTGTGGTGGCCGAGCAGTTCGC CCGCGAAACGTTGGGCGTGAAGTCGGTCTACATCATCCACGACACCACCGCCTACGGGCAGGGTGTGGCCGAGTTCTTCC GCCAGGCGGCTGAGGCCAACGGTTTAGAGGTCTTGGGCTTTGAGGGTACCGAAGAGCGCAGTGACTTCTCGGCCATCCTC ACCCCGATCCTGGCTGCCAATCCCGATCTGATCTTCTTCGGCGGTATCTACGACCAGGCTGGCCCCTTCTTCCGCCAGGC CCGCGACCGTGGCATCACTGCCCAGTTCATGGGACCCGATGGTATGGAGTCGGAAGAGCTGGTGACGCTGGCCGGTGATG CGGTCGATGGTATGTACTACACCACCGTCGCTGCTCCGGTGAGCCAGTTCCCCGATGCTGCGAAGTATGCCCAGGACTAC CAGGCCGCGTTCGGTGATGCGGCGCCCGCCTTCTCGGCGCAGGCGTATGATGCGACCGGTATCTGTCTGACCGCAATTAC CAACGCGGCAAAGGCTGCCGGTGGCAAGCCGACCCGTGCTCAGGTGTTGGCTGAAATTAAGGCTCTCCAGTCGTATAAGG GTATCACCGGTACCTACACCTTCAGCCCGAAGGGTGACCCCAACCCGGCAACCTACTTTGTGTTGCAGGTGAACGCTGCC GACTGGAGCCAGAACCGGCTGGTGACCCGCCTGGAGATTGCGCCTCCTGGCGAAGCTGCCAGTGGTGGTGGCACGACTGG CGGTACAACCGACTTCGATCTGGCAGCGCTGGCCGCTCAGCTCGGCAATGTTGCTGCCCGGCTCGGCACCATCAAGATTG CCACCCAAGGCCCGCTGTCAGGTGGTCAGGCTGCGCTCGGTACCGGTATGAAGAATGCCGCCGAGCTGGCAGTTGAGCAG CTCAATGCTCAGTTGGGTGCGCTTGGGATCAGGTTTGAGCTGGTTCCGTTCGACGACCAGGCTCGGCCAGAGGTTGGCTC GGCCAACGCCAAGAATATCGTCTCGGATCAGGATATTCTCTGTGTCGTTGGTCACCTCAATTCGGGTGTCGCCCTGGCTG CACTGCCCGACTACAAGAATGCCAGCCTGGCAATGGTCTCGCCGGCCAACACCAACCCAAACATCACCGAGGGCGGCTAT GAAGTTGCCTTCCGCGTCGTCGGTCGCGACGACGTGCAGGGTGTGGTGGCCGAGCAGTTTGCCCGCGAAGAGCTGGGCGT GAAGTCGGTCTACATCATCCACGACACCACCGCCTACGGGCAGGGTGTGGCCGAGTTCTTCCGCCAGGCGGCTGAGGCCA ACGGCTTGCAGGTGCTCGGCTTTGAGGGTACCGAAGAGCGCAGCGATTTCTCGGCAATCCTCACCCCGATCCTGGCTGCC AATCCCGATCTGGTCTTCTTCGGCGGTATCTACGACCAGGCTGGCCCCTTCTTCCGCCAGGCCCGCGACCGTGGCATCAC TGCCCAGTTTATGGGTCCAGACGGTCTGGAGTCGTCTGAGCTGGTCGATCTGGCAGGCGATGCAGTTGATGGCATGCACT ACACCACCGTCGCTGCTCCGGTAAGCCAGTTCCCGCGTGCAGCCCAGTACGCGCAGGATTACCAGGCTGCGTTCGGCGAT GCGGCGCCCGCCTTCTCGGCGCAGGCGTACGATGCGACCAACATCTGCGCTGCCGGCATTCTGTCCGCAGCAGTTGCAGC CGGTGGTAAGCCGACCCGCGCCCAGGTTGTGCAGGCTATCCGCGATCTGCCACCATTCCCTGGCATTACCGGCACGTATG ACTTCAATGCCAAGGGAGACCCAACGGTTGCTACCTATTTCGTGTTGAAGGTCAACGCGGCTGATTGGAACCAGAACGAG CTGATTAGCCGGCTGGAAATTGCGCCACCACAATAA
Upstream 100 bases:
>100_bases AGCGCTGCGCAAAGGCGTTCTGGTATCATTGTGTTGTGTACAACCAGCCCTCTGGAGACAGCAGATTACCGGTTTGAAGT ATGTTAAGGAGAAATCGGTC
Downstream 100 bases:
>100_bases GCCATTGATAGGTTGTTCGCGTGGCAGTGCGCGAGAAACTCTTCTCGCGCACTTGCCCAATCCATAAGTTCGGGAGTTTT CATGGCTGTCGATGCAACGG
Product: Extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 811; Mature: 811
Protein sequence:
>811_residues MKRSISFLLLVGMLASMLAACGAPQAQPTATPQPAPQATEAPQPTAAPTEPPAAQVIKIATQSPLSGGQAALGTGMKNAA ELAVQQLSGPLTELGFRVELAPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKNASLPMVSPANTNPN ITEGGYEVAFRVVGRDDVQGVVAEQFARETLGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLEVLGFEGTEERSDFSAIL TPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGMESEELVTLAGDAVDGMYYTTVAAPVSQFPDAAKYAQDY QAAFGDAAPAFSAQAYDATGICLTAITNAAKAAGGKPTRAQVLAEIKALQSYKGITGTYTFSPKGDPNPATYFVLQVNAA DWSQNRLVTRLEIAPPGEAASGGGTTGGTTDFDLAALAAQLGNVAARLGTIKIATQGPLSGGQAALGTGMKNAAELAVEQ LNAQLGALGIRFELVPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKNASLAMVSPANTNPNITEGGY EVAFRVVGRDDVQGVVAEQFAREELGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLQVLGFEGTEERSDFSAILTPILAA NPDLVFFGGIYDQAGPFFRQARDRGITAQFMGPDGLESSELVDLAGDAVDGMHYTTVAAPVSQFPRAAQYAQDYQAAFGD AAPAFSAQAYDATNICAAGILSAAVAAGGKPTRAQVVQAIRDLPPFPGITGTYDFNAKGDPTVATYFVLKVNAADWNQNE LISRLEIAPPQ
Sequences:
>Translated_811_residues MKRSISFLLLVGMLASMLAACGAPQAQPTATPQPAPQATEAPQPTAAPTEPPAAQVIKIATQSPLSGGQAALGTGMKNAA ELAVQQLSGPLTELGFRVELAPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKNASLPMVSPANTNPN ITEGGYEVAFRVVGRDDVQGVVAEQFARETLGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLEVLGFEGTEERSDFSAIL TPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGMESEELVTLAGDAVDGMYYTTVAAPVSQFPDAAKYAQDY QAAFGDAAPAFSAQAYDATGICLTAITNAAKAAGGKPTRAQVLAEIKALQSYKGITGTYTFSPKGDPNPATYFVLQVNAA DWSQNRLVTRLEIAPPGEAASGGGTTGGTTDFDLAALAAQLGNVAARLGTIKIATQGPLSGGQAALGTGMKNAAELAVEQ LNAQLGALGIRFELVPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKNASLAMVSPANTNPNITEGGY EVAFRVVGRDDVQGVVAEQFAREELGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLQVLGFEGTEERSDFSAILTPILAA NPDLVFFGGIYDQAGPFFRQARDRGITAQFMGPDGLESSELVDLAGDAVDGMHYTTVAAPVSQFPRAAQYAQDYQAAFGD AAPAFSAQAYDATNICAAGILSAAVAAGGKPTRAQVVQAIRDLPPFPGITGTYDFNAKGDPTVATYFVLKVNAADWNQNE LISRLEIAPPQ >Mature_811_residues MKRSISFLLLVGMLASMLAACGAPQAQPTATPQPAPQATEAPQPTAAPTEPPAAQVIKIATQSPLSGGQAALGTGMKNAA ELAVQQLSGPLTELGFRVELAPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKNASLPMVSPANTNPN ITEGGYEVAFRVVGRDDVQGVVAEQFARETLGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLEVLGFEGTEERSDFSAIL TPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGMESEELVTLAGDAVDGMYYTTVAAPVSQFPDAAKYAQDY QAAFGDAAPAFSAQAYDATGICLTAITNAAKAAGGKPTRAQVLAEIKALQSYKGITGTYTFSPKGDPNPATYFVLQVNAA DWSQNRLVTRLEIAPPGEAASGGGTTGGTTDFDLAALAAQLGNVAARLGTIKIATQGPLSGGQAALGTGMKNAAELAVEQ LNAQLGALGIRFELVPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKNASLAMVSPANTNPNITEGGY EVAFRVVGRDDVQGVVAEQFAREELGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLQVLGFEGTEERSDFSAILTPILAA NPDLVFFGGIYDQAGPFFRQARDRGITAQFMGPDGLESSELVDLAGDAVDGMHYTTVAAPVSQFPRAAQYAQDYQAAFGD AAPAFSAQAYDATNICAAGILSAAVAAGGKPTRAQVVQAIRDLPPFPGITGTYDFNAKGDPTVATYFVLKVNAADWNQNE LISRLEIAPPQ
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=246, Percent_Identity=36.9918699186992, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI48994941, Length=291, Percent_Identity=31.9587628865979, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 84489; Mature: 84489
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSISFLLLVGMLASMLAACGAPQAQPTATPQPAPQATEAPQPTAAPTEPPAAQVIKIA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE TQSPLSGGQAALGTGMKNAAELAVQQLSGPLTELGFRVELAPFDDQARPEVGSANAKNIV CCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCC SDQDILCVVGHLNSGVALAALPDYKNASLPMVSPANTNPNITEGGYEVAFRVVGRDDVQG CCCCEEEEEEECCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCHHHH VVAEQFARETLGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLEVLGFEGTEERSDFSAIL HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH TPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGMESEELVTLAGDAVDGMYY HHHHHCCCCEEEECCCHHHCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCEEE TTVAAPVSQFPDAAKYAQDYQAAFGDAAPAFSAQAYDATGICLTAITNAAKAAGGKPTRA EHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH QVLAEIKALQSYKGITGTYTFSPKGDPNPATYFVLQVNAADWSQNRLVTRLEIAPPGEAA HHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCC SGGGTTGGTTDFDLAALAAQLGNVAARLGTIKIATQGPLSGGQAALGTGMKNAAELAVEQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHH LNAQLGALGIRFELVPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKN HHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC ASLAMVSPANTNPNITEGGYEVAFRVVGRDDVQGVVAEQFAREELGVKSVYIIHDTTAYG CCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHH QGVAEFFRQAAEANGLQVLGFEGTEERSDFSAILTPILAANPDLVFFGGIYDQAGPFFRQ HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCHHHHH ARDRGITAQFMGPDGLESSELVDLAGDAVDGMHYTTVAAPVSQFPRAAQYAQDYQAAFGD HHHCCCEEEECCCCCCCCCHHHHHCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHCC AAPAFSAQAYDATNICAAGILSAAVAAGGKPTRAQVVQAIRDLPPFPGITGTYDFNAKGD CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCC PTVATYFVLKVNAADWNQNELISRLEIAPPQ CCEEEEEEEEEECCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MKRSISFLLLVGMLASMLAACGAPQAQPTATPQPAPQATEAPQPTAAPTEPPAAQVIKIA CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEE TQSPLSGGQAALGTGMKNAAELAVQQLSGPLTELGFRVELAPFDDQARPEVGSANAKNIV CCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCC SDQDILCVVGHLNSGVALAALPDYKNASLPMVSPANTNPNITEGGYEVAFRVVGRDDVQG CCCCEEEEEEECCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCHHHH VVAEQFARETLGVKSVYIIHDTTAYGQGVAEFFRQAAEANGLEVLGFEGTEERSDFSAIL HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH TPILAANPDLIFFGGIYDQAGPFFRQARDRGITAQFMGPDGMESEELVTLAGDAVDGMYY HHHHHCCCCEEEECCCHHHCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCCCEEE TTVAAPVSQFPDAAKYAQDYQAAFGDAAPAFSAQAYDATGICLTAITNAAKAAGGKPTRA EHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH QVLAEIKALQSYKGITGTYTFSPKGDPNPATYFVLQVNAADWSQNRLVTRLEIAPPGEAA HHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCC SGGGTTGGTTDFDLAALAAQLGNVAARLGTIKIATQGPLSGGQAALGTGMKNAAELAVEQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHH LNAQLGALGIRFELVPFDDQARPEVGSANAKNIVSDQDILCVVGHLNSGVALAALPDYKN HHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC ASLAMVSPANTNPNITEGGYEVAFRVVGRDDVQGVVAEQFAREELGVKSVYIIHDTTAYG CCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHH QGVAEFFRQAAEANGLQVLGFEGTEERSDFSAILTPILAANPDLVFFGGIYDQAGPFFRQ HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCHHHHH ARDRGITAQFMGPDGLESSELVDLAGDAVDGMHYTTVAAPVSQFPRAAQYAQDYQAAFGD HHHCCCEEEECCCCCCCCCHHHHHCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHCC AAPAFSAQAYDATNICAAGILSAAVAAGGKPTRAQVVQAIRDLPPFPGITGTYDFNAKGD CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCC PTVATYFVLKVNAADWNQNELISRLEIAPPQ CCEEEEEEEEEECCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]