| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is menC [H]
Identifier: 222524213
GI number: 222524213
Start: 1178878
End: 1179987
Strand: Direct
Name: menC [H]
Synonym: Chy400_0934
Alternate gene names: 222524213
Gene position: 1178878-1179987 (Clockwise)
Preceding gene: 222524212
Following gene: 222524214
Centisome position: 22.37
GC content: 61.71
Gene sequence:
>1110_bases ATGCGGATTGAGGCCATCGAATTGCGACGGATCCGGTTGCCATACCGGGCACCCTTCGAGACGAGCGGCTGGCGGGAAGA GGCCAATCATTCGGTGATTGTGACCCTGCATAGCGAGGGGGTAGTGGGCTGGGGCGAAGCTCCGGTTGGCGTGGGGCCGT GGTACAACGAAGAGACCCAATCTACCGCCTGGGTGATGATGCGCGAGATTCTGGCCCCGATGCTGCTGGGGCGTGATCTG AGCCGGCCAGAGGAGGTGGATGCGATCTTTACCCGTGTGCGCGGCAACCGCATGGCACGGGCCGGTCTTGAGTTCGCCGC CTGGGATCTGTTCGGGCGCGCACAGGGCACGAGCCTGAGCACAATGCTCGGCGGCACCCGGCAACGGGTGGAAGTTGGTG TCAGTGTTGGTGTCCAGGAGTCGATAGAGGCGTTGCTTGATGTGGTCGCCGGTTATGTCAATGCCGGTTACCAGCGGGTG AAACTCAAGATCAAACCGGGCTGGGATGTCGAGCCAACACGGGCTGTACGCGAGCGCTGGCCCGATCTGCGCTTGCAGGT TGATGCCAACAGCATCTACACCCTCGATCAGGCCGACCAGTTGGCCCGGCTCGACGAGTTTGATCTGTTGTTGATCGAGC AGCCCCTGGCGCATGACGACATCATCGATCACGCCAAACTTCAGCGGCTGCTCCGCACGCCGATTTGTCTCGATGAGAGC ATTGTCTCGCCAGATCATGCCCGCTGGGCAATTGAGTTGGGTGCCTGCGGCGTAATCAATATCAAACCGTCGCGGGTTGG TGGTTTTACGGCAGCCCGGCGAATTCACGATCTGGCACAGGCCGCCGGCATCCCGGTCTGGTGCGGCGGCATGCTCGAAA CCGGCATCGGGCGGGCTGCCAACGTCGGGCTGGCCAGTCTGCCCAACTTTAGCCTGCCCGGCGACATCAGCGCGAATGAT CGCTACTTCCACCAGGACATTGTGACCAACCCGTTTACGCTCAACCCCGACAGTACACTCAGCGTCCCAACCGGGCCAGG GAGTGGGGCTGAGGTCGATCTGGAACGTCTTGCGGCAGTCACGACCGATTATGTCATGCTGCGTGCGTAG
Upstream 100 bases:
>100_bases TTATTCCGGCGGCGTTGGCCTACGGCAATCGCGGGGCGGGTGGTGTGATCCCACCAGGAGCAACTCTGATCTTTGAAGTG GAGCTGTTGGAGGTGCGTTG
Downstream 100 bases:
>100_bases CAGCATGTGGAATGCATGATGGAACAGCGCCCAATTCAATGGCTGGTGAGCGGCGTGGTGGCGCTCGTGATGATTGGTCT GCTCGTGTTCGTCAACAGCG
Product: Mandelate racemase/muconate lactonizing protein
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MRIEAIELRRIRLPYRAPFETSGWREEANHSVIVTLHSEGVVGWGEAPVGVGPWYNEETQSTAWVMMREILAPMLLGRDL SRPEEVDAIFTRVRGNRMARAGLEFAAWDLFGRAQGTSLSTMLGGTRQRVEVGVSVGVQESIEALLDVVAGYVNAGYQRV KLKIKPGWDVEPTRAVRERWPDLRLQVDANSIYTLDQADQLARLDEFDLLLIEQPLAHDDIIDHAKLQRLLRTPICLDES IVSPDHARWAIELGACGVINIKPSRVGGFTAARRIHDLAQAAGIPVWCGGMLETGIGRAANVGLASLPNFSLPGDISAND RYFHQDIVTNPFTLNPDSTLSVPTGPGSGAEVDLERLAAVTTDYVMLRA
Sequences:
>Translated_369_residues MRIEAIELRRIRLPYRAPFETSGWREEANHSVIVTLHSEGVVGWGEAPVGVGPWYNEETQSTAWVMMREILAPMLLGRDL SRPEEVDAIFTRVRGNRMARAGLEFAAWDLFGRAQGTSLSTMLGGTRQRVEVGVSVGVQESIEALLDVVAGYVNAGYQRV KLKIKPGWDVEPTRAVRERWPDLRLQVDANSIYTLDQADQLARLDEFDLLLIEQPLAHDDIIDHAKLQRLLRTPICLDES IVSPDHARWAIELGACGVINIKPSRVGGFTAARRIHDLAQAAGIPVWCGGMLETGIGRAANVGLASLPNFSLPGDISAND RYFHQDIVTNPFTLNPDSTLSVPTGPGSGAEVDLERLAAVTTDYVMLRA >Mature_369_residues MRIEAIELRRIRLPYRAPFETSGWREEANHSVIVTLHSEGVVGWGEAPVGVGPWYNEETQSTAWVMMREILAPMLLGRDL SRPEEVDAIFTRVRGNRMARAGLEFAAWDLFGRAQGTSLSTMLGGTRQRVEVGVSVGVQESIEALLDVVAGYVNAGYQRV KLKIKPGWDVEPTRAVRERWPDLRLQVDANSIYTLDQADQLARLDEFDLLLIEQPLAHDDIIDHAKLQRLLRTPICLDES IVSPDHARWAIELGACGVINIKPSRVGGFTAARRIHDLAQAAGIPVWCGGMLETGIGRAANVGLASLPNFSLPGDISAND RYFHQDIVTNPFTLNPDSTLSVPTGPGSGAEVDLERLAAVTTDYVMLRA
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081876, Length=305, Percent_Identity=29.8360655737705, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 - InterPro: IPR010197 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 40623; Mature: 40623
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIEAIELRRIRLPYRAPFETSGWREEANHSVIVTLHSEGVVGWGEAPVGVGPWYNEETQ CCCCCEEHEEEECCCCCCCCCCCCHHHCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCC STAWVMMREILAPMLLGRDLSRPEEVDAIFTRVRGNRMARAGLEFAAWDLFGRAQGTSLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCHH TMLGGTRQRVEVGVSVGVQESIEALLDVVAGYVNAGYQRVKLKIKPGWDVEPTRAVRERW HHHCCCHHEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCC PDLRLQVDANSIYTLDQADQLARLDEFDLLLIEQPLAHDDIIDHAKLQRLLRTPICLDES CCEEEEECCCCEEEECCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC IVSPDHARWAIELGACGVINIKPSRVGGFTAARRIHDLAQAAGIPVWCGGMLETGIGRAA CCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHCCCCHH NVGLASLPNFSLPGDISANDRYFHQDIVTNPFTLNPDSTLSVPTGPGSGAEVDLERLAAV CCCHHCCCCCCCCCCCCCCCCEEHHHHCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHH TTDYVMLRA HHCEEEEEC >Mature Secondary Structure MRIEAIELRRIRLPYRAPFETSGWREEANHSVIVTLHSEGVVGWGEAPVGVGPWYNEETQ CCCCCEEHEEEECCCCCCCCCCCCHHHCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCC STAWVMMREILAPMLLGRDLSRPEEVDAIFTRVRGNRMARAGLEFAAWDLFGRAQGTSLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCCCCCHH TMLGGTRQRVEVGVSVGVQESIEALLDVVAGYVNAGYQRVKLKIKPGWDVEPTRAVRERW HHHCCCHHEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHCC PDLRLQVDANSIYTLDQADQLARLDEFDLLLIEQPLAHDDIIDHAKLQRLLRTPICLDES CCEEEEECCCCEEEECCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC IVSPDHARWAIELGACGVINIKPSRVGGFTAARRIHDLAQAAGIPVWCGGMLETGIGRAA CCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHCCCCHH NVGLASLPNFSLPGDISANDRYFHQDIVTNPFTLNPDSTLSVPTGPGSGAEVDLERLAAV CCCHHCCCCCCCCCCCCCCCCEEHHHHCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHH TTDYVMLRA HHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 10194342 [H]