| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524165
Identifier: 222524165
GI number: 222524165
Start: 1112798
End: 1113853
Strand: Direct
Name: 222524165
Synonym: Chy400_0883
Alternate gene names: NA
Gene position: 1112798-1113853 (Clockwise)
Preceding gene: 222524164
Following gene: 222524166
Centisome position: 21.12
GC content: 57.48
Gene sequence:
>1056_bases ATGATGAAACTCCGTGTGCTTACTCTGGGTATCCTGATCATCCTGCTCATCACCGCGTGCAGTGCGCCAACACCGACCAC GCCTGCTGCGGCACCGACGGCTGCGCCGGCACCTAACGCTCAACCAACCTTACAACAAGTCACGCTGGCGATGTCGTATA TTCCGAACATTCAGTTTGCCCCCTACTATGTCGCGGCTGCCAAAGGCTATTACGCTGCCGAAGGGATTGAGGTCGTCTTC GATTACAACTTCGAGAATGATGTCTTGCAGCGAGCTGCAACCTGGCCGACCAGTGGGGTTGCGTTCGCCACCACCAGCGG CACCTCGGTACTGCTGGCTCGCCAGCAAGGATTGCCGGTCAAGACGGTCATGACGCTCTATCAGCGCTTCCCGATTGCCT TCTTCGCCAAGAGCAATGTGCCGTTGGCAAGTGTGAATGACCTGCGCGGGCAGACGATTGGTATTCCTGGCCGTTTCGGC GAGAGCTTTTATGCGCTTCTGGCTGCGCTCTACGCCGGCGGTATGAGCGAAGCCGATGTGACCGTGCAGGAGATCGGCTT CACCCAAACCGCTGCGGTGATGGAAGATAAGGTGCCGGTCGCGATTGGCTACGCGATGAACGAACCGGTTCAGTTGCGCG GTCAGGGTGTCGAAGTGAATGTTCTGCTGGCAGCCGATGTCTTTAACCTGGCCGCCAATGGTATCGCCGTAAGTGAGGCC CTGATCGCTCAGAATCCTGAGCTGGTACGGAAATTTGTGCGGGCCAGTCTGCGCGGGCTGGCCGATACGCTGGCCAATCC TGATGAGGCGTTTGATCTGAGCCTGCAATTCATTCCCGAAGCCCAACTGGGCGATCTCTCATTACAACGCCAGGTATTGC AAGAGAGTCTTCCCTTCTGGCAAAATGAATTAACTGCGCAATACGGTTTGGGCTACACCGACGGCCAGCTCTGGACGCGC ACCGAGGAGTTTATGCGCGCAGCGGGATTGCTGTCTGCGCCGGTTGATGTGCAGCAGGCGTTCACGAATGAGTTTGTACC GGGCGGATCGTACTGA
Upstream 100 bases:
>100_bases ATCACGTTAACCCTCTACGTGCTGGCCGGTTTGCTGGAACGACTACTGGTTCGCTGGGAAGCATCATAGCAATGACACAC GTCAATTCAGGAGCATGACA
Downstream 100 bases:
>100_bases TCACGTCGCACAACCTGCGACGGGTAGGTGAAGGGAATGCCTTCGCCTACCCGTTGTGCTTTTTGCGGGTAGGTGCTGAG TGAGGGGTGGCGGTAGGTAG
Product: NMT1/THI5 like domain-containing protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; NMT1/THI5 Like Domain-Containing Protein; Membrane Lipoprotein Lipid Attachment Site; Thiamine Biosynthesis; Twin-Arginine Translocation Pathway Signal; Diguanylate Cyclase/Phosphodiesterase; Pyrimidine Biosynthesis; Pyrimidine Biosynthesis ; WD-40 Repeat Protein; Pyrimidine Biosynthesis; NMT1/THI5-Ike Domain-Containing Protein; Exported Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MMKLRVLTLGILIILLITACSAPTPTTPAAAPTAAPAPNAQPTLQQVTLAMSYIPNIQFAPYYVAAAKGYYAAEGIEVVF DYNFENDVLQRAATWPTSGVAFATTSGTSVLLARQQGLPVKTVMTLYQRFPIAFFAKSNVPLASVNDLRGQTIGIPGRFG ESFYALLAALYAGGMSEADVTVQEIGFTQTAAVMEDKVPVAIGYAMNEPVQLRGQGVEVNVLLAADVFNLAANGIAVSEA LIAQNPELVRKFVRASLRGLADTLANPDEAFDLSLQFIPEAQLGDLSLQRQVLQESLPFWQNELTAQYGLGYTDGQLWTR TEEFMRAAGLLSAPVDVQQAFTNEFVPGGSY
Sequences:
>Translated_351_residues MMKLRVLTLGILIILLITACSAPTPTTPAAAPTAAPAPNAQPTLQQVTLAMSYIPNIQFAPYYVAAAKGYYAAEGIEVVF DYNFENDVLQRAATWPTSGVAFATTSGTSVLLARQQGLPVKTVMTLYQRFPIAFFAKSNVPLASVNDLRGQTIGIPGRFG ESFYALLAALYAGGMSEADVTVQEIGFTQTAAVMEDKVPVAIGYAMNEPVQLRGQGVEVNVLLAADVFNLAANGIAVSEA LIAQNPELVRKFVRASLRGLADTLANPDEAFDLSLQFIPEAQLGDLSLQRQVLQESLPFWQNELTAQYGLGYTDGQLWTR TEEFMRAAGLLSAPVDVQQAFTNEFVPGGSY >Mature_351_residues MMKLRVLTLGILIILLITACSAPTPTTPAAAPTAAPAPNAQPTLQQVTLAMSYIPNIQFAPYYVAAAKGYYAAEGIEVVF DYNFENDVLQRAATWPTSGVAFATTSGTSVLLARQQGLPVKTVMTLYQRFPIAFFAKSNVPLASVNDLRGQTIGIPGRFG ESFYALLAALYAGGMSEADVTVQEIGFTQTAAVMEDKVPVAIGYAMNEPVQLRGQGVEVNVLLAADVFNLAANGIAVSEA LIAQNPELVRKFVRASLRGLADTLANPDEAFDLSLQFIPEAQLGDLSLQRQVLQESLPFWQNELTAQYGLGYTDGQLWTR TEEFMRAAGLLSAPVDVQQAFTNEFVPGGSY
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322616, Length=315, Percent_Identity=23.1746031746032, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319957, Length=315, Percent_Identity=22.8571428571429, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321050, Length=315, Percent_Identity=22.8571428571429, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323997, Length=315, Percent_Identity=22.8571428571429, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37701; Mature: 37701
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKLRVLTLGILIILLITACSAPTPTTPAAAPTAAPAPNAQPTLQQVTLAMSYIPNIQFA CCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC PYYVAAAKGYYAAEGIEVVFDYNFENDVLQRAATWPTSGVAFATTSGTSVLLARQQGLPV CEEEEECCCCEECCCEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCH KTVMTLYQRFPIAFFAKSNVPLASVNDLRGQTIGIPGRFGESFYALLAALYAGGMSEADV HHHHHHHHHCCEEEEECCCCCEECHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCC TVQEIGFTQTAAVMEDKVPVAIGYAMNEPVQLRGQGVEVNVLLAADVFNLAANGIAVSEA CHHHCCCHHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEEEEEHHHHHHHHCCHHHHHH LIAQNPELVRKFVRASLRGLADTLANPDEAFDLSLQFIPEAQLGDLSLQRQVLQESLPFW HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCHHHHHHHHHHHHCCHH QNELTAQYGLGYTDGQLWTRTEEFMRAAGLLSAPVDVQQAFTNEFVPGGSY HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MMKLRVLTLGILIILLITACSAPTPTTPAAAPTAAPAPNAQPTLQQVTLAMSYIPNIQFA CCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC PYYVAAAKGYYAAEGIEVVFDYNFENDVLQRAATWPTSGVAFATTSGTSVLLARQQGLPV CEEEEECCCCEECCCEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCH KTVMTLYQRFPIAFFAKSNVPLASVNDLRGQTIGIPGRFGESFYALLAALYAGGMSEADV HHHHHHHHHCCEEEEECCCCCEECHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCC TVQEIGFTQTAAVMEDKVPVAIGYAMNEPVQLRGQGVEVNVLLAADVFNLAANGIAVSEA CHHHCCCHHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEEEEEHHHHHHHHCCHHHHHH LIAQNPELVRKFVRASLRGLADTLANPDEAFDLSLQFIPEAQLGDLSLQRQVLQESLPFW HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCHHHHHHHHHHHHCCHH QNELTAQYGLGYTDGQLWTRTEEFMRAAGLLSAPVDVQQAFTNEFVPGGSY HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA