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The map label for this gene is ssuC [C]

Identifier: 222524164

GI number: 222524164

Start: 1111960

End: 1112766

Strand: Direct

Name: ssuC [C]

Synonym: Chy400_0882

Alternate gene names: 222524164

Gene position: 1111960-1112766 (Clockwise)

Preceding gene: 222524158

Following gene: 222524165

Centisome position: 21.1

GC content: 60.72

Gene sequence:

>807_bases
ATGCAGCAAACATTGCCTGTAACAAGGGTCTCGCCGCGGGTCAGATCACTACAACGCTTCGAGTGGCCGGCTCTCGGTTT
ACCAGTCACCCTGATGCTCCTGCTCGTATTCTGGCAGGCAGGAGTGACTCTGAGCGGCTACCCGGCCTTTATTCTGCCTT
CGCCGGCCCTGGTTGCCGGACGTTTCTGGCAGGCACTGAGTAGTGGTTTGCTCTGGCAGCACACTCTCGCCACCCTGAGC
GCGGCTCTGGGCGGGTTCACGCTGGCACTGATCATCGCGCTTATCCTGGGTTACACGCTAGCACACATCCGCTGGCTCGA
ACAGGCCCTGGCCCCGGTGCTGGCCGCCAGTCAGGCGATCCCGGTGGTGGCAGTCGCTCCCCTCATTATCCTGTGGTTTG
GCGCCGGCCTGACCTCGAAAGTTCTGGTGGCTGCACTGATCACCTTTCTGCCGATTCTTATCAATACGGTGGTCGCGATT
CGCAGCATTCCCCGCGAACTGATCGAGATGGCATACATCAGTGGCGCCAATCGCTGGCAACTGCTGCGCTACGTCGAAGC
TCCGCTGGCGCTGCCGGTACTGTTCGGCGGTGTCCGCACCGGGCTGGCGCTCGCCACAACCGGTGCCGTAGTCGGCGAGT
TTGTCGCCGGACGGGTTGGCCTGGGCGCGTTGATCAATATTGCTCGTGGTCTGTTCGATACGCCATTGATCTTTGTTGCC
CTGGCAACACTGGCCCTGATCACGTTAACCCTCTACGTGCTGGCCGGTTTGCTGGAACGACTACTGGTTCGCTGGGAAGC
ATCATAG

Upstream 100 bases:

>100_bases
TGCTGGCGGGATCATTTCCCGTCATGCTTCCGTATCTGTACCCCGAAGAGCGTTCGCTCGGCGGGGTTTTTCTATGCCCG
CCGCGAAAGGAGTTGGAACG

Downstream 100 bases:

>100_bases
CAATGACACACGTCAATTCAGGAGCATGACAATGATGAAACTCCGTGTGCTTACTCTGGGTATCCTGATCATCCTGCTCA
TCACCGCGTGCAGTGCGCCA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MQQTLPVTRVSPRVRSLQRFEWPALGLPVTLMLLLVFWQAGVTLSGYPAFILPSPALVAGRFWQALSSGLLWQHTLATLS
AALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSKVLVAALITFLPILINTVVAI
RSIPRELIEMAYISGANRWQLLRYVEAPLALPVLFGGVRTGLALATTGAVVGEFVAGRVGLGALINIARGLFDTPLIFVA
LATLALITLTLYVLAGLLERLLVRWEAS

Sequences:

>Translated_268_residues
MQQTLPVTRVSPRVRSLQRFEWPALGLPVTLMLLLVFWQAGVTLSGYPAFILPSPALVAGRFWQALSSGLLWQHTLATLS
AALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSKVLVAALITFLPILINTVVAI
RSIPRELIEMAYISGANRWQLLRYVEAPLALPVLFGGVRTGLALATTGAVVGEFVAGRVGLGALINIARGLFDTPLIFVA
LATLALITLTLYVLAGLLERLLVRWEAS
>Mature_268_residues
MQQTLPVTRVSPRVRSLQRFEWPALGLPVTLMLLLVFWQAGVTLSGYPAFILPSPALVAGRFWQALSSGLLWQHTLATLS
AALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAIPVVAVAPLIILWFGAGLTSKVLVAALITFLPILINTVVAI
RSIPRELIEMAYISGANRWQLLRYVEAPLALPVLFGGVRTGLALATTGAVVGEFVAGRVGLGALINIARGLFDTPLIFVA
LATLALITLTLYVLAGLLERLLVRWEAS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=229, Percent_Identity=37.9912663755458, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1786564, Length=244, Percent_Identity=28.6885245901639, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28685; Mature: 28685

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTLPVTRVSPRVRSLQRFEWPALGLPVTLMLLLVFWQAGVTLSGYPAFILPSPALVAG
CCCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHH
RFWQALSSGLLWQHTLATLSAALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVVAVAPLIILWFGAGLTSKVLVAALITFLPILINTVVAIRSIPRELIEMAYISGANRWQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLRYVEAPLALPVLFGGVRTGLALATTGAVVGEFVAGRVGLGALINIARGLFDTPLIFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLALITLTLYVLAGLLERLLVRWEAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQTLPVTRVSPRVRSLQRFEWPALGLPVTLMLLLVFWQAGVTLSGYPAFILPSPALVAG
CCCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHH
RFWQALSSGLLWQHTLATLSAALGGFTLALIIALILGYTLAHIRWLEQALAPVLAASQAI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVVAVAPLIILWFGAGLTSKVLVAALITFLPILINTVVAIRSIPRELIEMAYISGANRWQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLRYVEAPLALPVLFGGVRTGLALATTGAVVGEFVAGRVGLGALINIARGLFDTPLIFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATLALITLTLYVLAGLLERLLVRWEAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]