| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523867
Identifier: 222523867
GI number: 222523867
Start: 685722
End: 686558
Strand: Direct
Name: 222523867
Synonym: Chy400_0575
Alternate gene names: NA
Gene position: 685722-686558 (Clockwise)
Preceding gene: 222523865
Following gene: 222523874
Centisome position: 13.01
GC content: 56.51
Gene sequence:
>837_bases GTGCGCTTCTACGGTTTCTACACCAGCAACGGTAACGGCGTCGCTGATAGCGACCGGATCAAAATCCCGCTCGGCCCGGT CAATAGCAACGGTCAAATTAGCAGCTCGCGACCGGTGAACGTGAGCGGTGATATGACGCTGGAGTTCTGGATGAAGGCCA ATCCAGGCGATAATGATGCGCCGCCGTGCGATAGCTGGTACTACGGCAACATTGTGATCGACCGCGACGTGTACGGCGAT GGGGATTATGGTGACTACGGTGTTGCCATTTGCGGTAACAAACTCGTCGTCGGGTTTAATGTCGGACAGGATGATCGATT GCTCAAAGGCAATGCGATTGTCACCGACGGGCAATGGCATCACATCGCGATTACCCGCTCTGCAAGTGGACCGGTGCGTC TCTACATTGACGGGCAGCTCGATAGCGAGATGGATGGGCCGCCGGGACGGATTGATTATCGCCTGAATCGGCCAACGAGC TATCCTAACAGCGATCCTTACCTTGTGTTCGCTGCCGAAAAGCACGACGTGACCGGCAGTCTTTACTTCAACGGATGGAT CGACGATCTGCGCCTGTCGAACATCGTGCGTTACAGCGGGGCATTTGCTCGCCCAACTGCACCGCATGCGCTGGATGCGA ATACCGTTGCGCTTTACCGGTTTGATGAGGGCAGTGGGACAACCATCAACGATGCCACAGCCGGCAACCAAAGCCCCGGC GAACTGAAGCCGCGTGCCGGCGGTGCTGCTCAGCACTGGTCGAGTGATACTCCGTTCACTACGAGCAGTGTGCCGTTGAC GCCAAGAGCGTATATTCCGTTCATTGCGAATAGCTAG
Upstream 100 bases:
>100_bases GCCTACGCCGCAACCCACCCTGCCGCCGGTCACCACTACGCTGCAACCGTCGCCAGCACCAACAGCGCCTGCGGCCAGCC CAGCGACGGTCGGCTTTTCG
Downstream 100 bases:
>100_bases CAGTCATCGTTGATCAGCCAGATGAACATGAATGCACATTCTACCCGTGACCAGCCGGGTGAGCGGTATAGCACGCGCCC GGCATCAAGCACGGTGCGTG
Product: LamG domain-containing protein
Products: NA
Alternate protein names: Laminin G
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MRFYGFYTSNGNGVADSDRIKIPLGPVNSNGQISSSRPVNVSGDMTLEFWMKANPGDNDAPPCDSWYYGNIVIDRDVYGD GDYGDYGVAICGNKLVVGFNVGQDDRLLKGNAIVTDGQWHHIAITRSASGPVRLYIDGQLDSEMDGPPGRIDYRLNRPTS YPNSDPYLVFAAEKHDVTGSLYFNGWIDDLRLSNIVRYSGAFARPTAPHALDANTVALYRFDEGSGTTINDATAGNQSPG ELKPRAGGAAQHWSSDTPFTTSSVPLTPRAYIPFIANS
Sequences:
>Translated_278_residues MRFYGFYTSNGNGVADSDRIKIPLGPVNSNGQISSSRPVNVSGDMTLEFWMKANPGDNDAPPCDSWYYGNIVIDRDVYGD GDYGDYGVAICGNKLVVGFNVGQDDRLLKGNAIVTDGQWHHIAITRSASGPVRLYIDGQLDSEMDGPPGRIDYRLNRPTS YPNSDPYLVFAAEKHDVTGSLYFNGWIDDLRLSNIVRYSGAFARPTAPHALDANTVALYRFDEGSGTTINDATAGNQSPG ELKPRAGGAAQHWSSDTPFTTSSVPLTPRAYIPFIANS >Mature_278_residues MRFYGFYTSNGNGVADSDRIKIPLGPVNSNGQISSSRPVNVSGDMTLEFWMKANPGDNDAPPCDSWYYGNIVIDRDVYGD GDYGDYGVAICGNKLVVGFNVGQDDRLLKGNAIVTDGQWHHIAITRSASGPVRLYIDGQLDSEMDGPPGRIDYRLNRPTS YPNSDPYLVFAAEKHDVTGSLYFNGWIDDLRLSNIVRYSGAFARPTAPHALDANTVALYRFDEGSGTTINDATAGNQSPG ELKPRAGGAAQHWSSDTPFTTSSVPLTPRAYIPFIANS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30171; Mature: 30171
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYGFYTSNGNGVADSDRIKIPLGPVNSNGQISSSRPVNVSGDMTLEFWMKANPGDNDA CEEEEEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCEECCCCEEEEEEEECCCCCCCC PPCDSWYYGNIVIDRDVYGDGDYGDYGVAICGNKLVVGFNVGQDDRLLKGNAIVTDGQWH CCCCCEEECCEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEECCEEEECCCEE HIAITRSASGPVRLYIDGQLDSEMDGPPGRIDYRLNRPTSYPNSDPYLVFAAEKHDVTGS EEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEE LYFNGWIDDLRLSNIVRYSGAFARPTAPHALDANTVALYRFDEGSGTTINDATAGNQSPG EEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCC ELKPRAGGAAQHWSSDTPFTTSSVPLTPRAYIPFIANS CCCCCCCCCHHCCCCCCCEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MRFYGFYTSNGNGVADSDRIKIPLGPVNSNGQISSSRPVNVSGDMTLEFWMKANPGDNDA CEEEEEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCEECCCCEEEEEEEECCCCCCCC PPCDSWYYGNIVIDRDVYGDGDYGDYGVAICGNKLVVGFNVGQDDRLLKGNAIVTDGQWH CCCCCEEECCEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEECCEEEECCCEE HIAITRSASGPVRLYIDGQLDSEMDGPPGRIDYRLNRPTSYPNSDPYLVFAAEKHDVTGS EEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEE LYFNGWIDDLRLSNIVRYSGAFARPTAPHALDANTVALYRFDEGSGTTINDATAGNQSPG EEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCC ELKPRAGGAAQHWSSDTPFTTSSVPLTPRAYIPFIANS CCCCCCCCCHHCCCCCCCEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA