| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523865
Identifier: 222523865
GI number: 222523865
Start: 684016
End: 685335
Strand: Direct
Name: 222523865
Synonym: Chy400_0573
Alternate gene names: NA
Gene position: 684016-685335 (Clockwise)
Preceding gene: 222523864
Following gene: 222523867
Centisome position: 12.98
GC content: 58.18
Gene sequence:
>1320_bases ATGAGGATCGCGATTGTTGGTGCCGGCATTGCTGGTCTGAGTGCAGCCTACGATCTTGCCGGTCAGGGCTATGCGGTCAC GATTTACGAAGCGGGGGATCAGGTCGGTGGGCTGGCCAGTGGCTTTCGCGATGCAGCCTGGGATTGGCCGCTTGAACGGT TTTATCACCATATCTTCACCACCGACCACGCGATCATCGAATTGACGAACGACATCGGGATGCGTGATCGGCTCTTTTTT CGGGCACCGGTCACTGCGCAATGGTGGCGTGGACGAGGCTATGCACTCGACGGCGTGCTACCGGTATTGCGCTTCCCCGG CTTACCATTCATTGACCGGCTCCGGTTCGGTTTGACCGCCTTTTACCTGAAGTTTATTACGCAGAACTGGCAACGACTTG AGCAGACAACGGCTATGGCCTGGACAGAGCGGGTCTCCGGGCGTAATGTCGCTCGTGTGATCTGGCGGCCACTGCTTGAA GGCAAGTTTGGCCCCCACGCCGATGAAGTGAATATGGCCTGGTTGTGGGCACGTTTGCGGGCACGCAGCTTTCAATTGGG CTATTTTCGCGGTGGGTTTCAGGCGTTCGCCGATGAATTGTGTGCGGCCTGTGTCAGGCGTGGAGTGCAGGTGTGGCGGC AAACGCCGGTGAAGTCCGTTTGCCAGACAGCAACCGGCTGGCAAATTAGTGCGGCGCAGCATCCTCCAGCCGACTACGAT GCCGTCCTGGTTACCGGAGCGCCGGGCTTACTGGCTCGCCTGGTGACGACCCTCCCTGCCGAGTATCTGGGACAGTTGCG ACGGTTGAACTCAATGGGAGCGGTGGTGATGACCATCGCTCTCCGCCGCCCGCTCACCAATGGAATTTACTGGCTCAATC TGCCCAAAGACGAATTTCCCTTCCTGGCGCTGGTTGAGCACACTAACTTCATTGAACCGGATTATTACGGTGGTGACCAT TTGATTTACTGTGGTGATTATCTCGACCCCAACCACGAGTACTTTCGCCTCGATGCGTCAGCTTTGCTCGAACGCTTCCT GCCGGCGCTGCGCCGAATCAATCCGGCATTTCAGCCAGAGTGGGTGCGGGCGTACTGGTTGCACCGCGAAACCTATGCCC AACCGATTGTGCCGGTCAACCACAGTCGCAACATTCCCCCCATTGCCACCCCCCTGCCCGGCCTCTTTTGGGCCAGTATG AGCCAGGTCTACCCCTGGGATCGCGGTACCAATTATGCCGTTGAGCTGGGACGACGGGCCGCACGAGTGATGCACGAATT CGCCGGTCAGTATCAGCAGACAGTACCTTCAGGCTATTGA
Upstream 100 bases:
>100_bases GCCTGACCTGGCGTGATCTGGATCGCGCAGCAGCAATCCAGGCCCAATCTACGCCGAACGTCGAAACCAACGATACAGTC AATTCGCAGAAGGTGCTGCC
Downstream 100 bases:
>100_bases AATGCGGCGTGAACCGATGATAAAACAAGGTTGCAGCTCATTCAGGACACCAATCAGATCAAGCGCATGAGACACTCTCG TCCAGACTGGCGACCCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: Protoporphyrinogen Oxidase; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; Protoporphyrinogen Oxidase Protein; Amine Oxidase Flavin-Containing Protein
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MRIAIVGAGIAGLSAAYDLAGQGYAVTIYEAGDQVGGLASGFRDAAWDWPLERFYHHIFTTDHAIIELTNDIGMRDRLFF RAPVTAQWWRGRGYALDGVLPVLRFPGLPFIDRLRFGLTAFYLKFITQNWQRLEQTTAMAWTERVSGRNVARVIWRPLLE GKFGPHADEVNMAWLWARLRARSFQLGYFRGGFQAFADELCAACVRRGVQVWRQTPVKSVCQTATGWQISAAQHPPADYD AVLVTGAPGLLARLVTTLPAEYLGQLRRLNSMGAVVMTIALRRPLTNGIYWLNLPKDEFPFLALVEHTNFIEPDYYGGDH LIYCGDYLDPNHEYFRLDASALLERFLPALRRINPAFQPEWVRAYWLHRETYAQPIVPVNHSRNIPPIATPLPGLFWASM SQVYPWDRGTNYAVELGRRAARVMHEFAGQYQQTVPSGY
Sequences:
>Translated_439_residues MRIAIVGAGIAGLSAAYDLAGQGYAVTIYEAGDQVGGLASGFRDAAWDWPLERFYHHIFTTDHAIIELTNDIGMRDRLFF RAPVTAQWWRGRGYALDGVLPVLRFPGLPFIDRLRFGLTAFYLKFITQNWQRLEQTTAMAWTERVSGRNVARVIWRPLLE GKFGPHADEVNMAWLWARLRARSFQLGYFRGGFQAFADELCAACVRRGVQVWRQTPVKSVCQTATGWQISAAQHPPADYD AVLVTGAPGLLARLVTTLPAEYLGQLRRLNSMGAVVMTIALRRPLTNGIYWLNLPKDEFPFLALVEHTNFIEPDYYGGDH LIYCGDYLDPNHEYFRLDASALLERFLPALRRINPAFQPEWVRAYWLHRETYAQPIVPVNHSRNIPPIATPLPGLFWASM SQVYPWDRGTNYAVELGRRAARVMHEFAGQYQQTVPSGY >Mature_439_residues MRIAIVGAGIAGLSAAYDLAGQGYAVTIYEAGDQVGGLASGFRDAAWDWPLERFYHHIFTTDHAIIELTNDIGMRDRLFF RAPVTAQWWRGRGYALDGVLPVLRFPGLPFIDRLRFGLTAFYLKFITQNWQRLEQTTAMAWTERVSGRNVARVIWRPLLE GKFGPHADEVNMAWLWARLRARSFQLGYFRGGFQAFADELCAACVRRGVQVWRQTPVKSVCQTATGWQISAAQHPPADYD AVLVTGAPGLLARLVTTLPAEYLGQLRRLNSMGAVVMTIALRRPLTNGIYWLNLPKDEFPFLALVEHTNFIEPDYYGGDH LIYCGDYLDPNHEYFRLDASALLERFLPALRRINPAFQPEWVRAYWLHRETYAQPIVPVNHSRNIPPIATPLPGLFWASM SQVYPWDRGTNYAVELGRRAARVMHEFAGQYQQTVPSGY
Specific function: Unknown
COG id: COG1232
COG function: function code H; Protoporphyrinogen oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49885; Mature: 49885
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAIVGAGIAGLSAAYDLAGQGYAVTIYEAGDQVGGLASGFRDAAWDWPLERFYHHIFT CEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCHHCCCCCCHHHHHHHHHC TDHAIIELTNDIGMRDRLFFRAPVTAQWWRGRGYALDGVLPVLRFPGLPFIDRLRFGLTA CCCEEEEEECCCCCCCCEEEECCCCHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHH FYLKFITQNWQRLEQTTAMAWTERVSGRNVARVIWRPLLEGKFGPHADEVNMAWLWARLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ARSFQLGYFRGGFQAFADELCAACVRRGVQVWRQTPVKSVCQTATGWQISAAQHPPADYD HHHEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCCCC AVLVTGAPGLLARLVTTLPAEYLGQLRRLNSMGAVVMTIALRRPLTNGIYWLNLPKDEFP EEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCC FLALVEHTNFIEPDYYGGDHLIYCGDYLDPNHEYFRLDASALLERFLPALRRINPAFQPE EEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCC WVRAYWLHRETYAQPIVPVNHSRNIPPIATPLPGLFWASMSQVYPWDRGTNYAVELGRRA HHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH ARVMHEFAGQYQQTVPSGY HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRIAIVGAGIAGLSAAYDLAGQGYAVTIYEAGDQVGGLASGFRDAAWDWPLERFYHHIFT CEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCHHCCCCCCHHHHHHHHHC TDHAIIELTNDIGMRDRLFFRAPVTAQWWRGRGYALDGVLPVLRFPGLPFIDRLRFGLTA CCCEEEEEECCCCCCCCEEEECCCCHHHHCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHH FYLKFITQNWQRLEQTTAMAWTERVSGRNVARVIWRPLLEGKFGPHADEVNMAWLWARLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ARSFQLGYFRGGFQAFADELCAACVRRGVQVWRQTPVKSVCQTATGWQISAAQHPPADYD HHHEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEECCCCCCCCCC AVLVTGAPGLLARLVTTLPAEYLGQLRRLNSMGAVVMTIALRRPLTNGIYWLNLPKDEFP EEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCC FLALVEHTNFIEPDYYGGDHLIYCGDYLDPNHEYFRLDASALLERFLPALRRINPAFQPE EEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCC WVRAYWLHRETYAQPIVPVNHSRNIPPIATPLPGLFWASMSQVYPWDRGTNYAVELGRRA HHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH ARVMHEFAGQYQQTVPSGY HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA