| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523748
Identifier: 222523748
GI number: 222523748
Start: 552313
End: 553302
Strand: Reverse
Name: 222523748
Synonym: Chy400_0454
Alternate gene names: NA
Gene position: 553302-552313 (Counterclockwise)
Preceding gene: 222523749
Following gene: 222523747
Centisome position: 10.5
GC content: 57.37
Gene sequence:
>990_bases ATGCGCAGATGGTTACTCTTAGGTTTGATCGTCATCCTGACGGCCTGTGGTGCGGCGACGACACCGGCAGTTTCTGAGCC GCCGTTGACCACTGTGCGGGTTGGTTTGGACTGGACGCCGAACACGAACCATACCGGCCTGTACGTGGCGCAGGCGCAAG GTTATTACAGGGATCAGGGGTTGCAGGTCGAGATTCTCGGTGCGCAAGAGGGTGGTACAGTCGAGCAGCTTGTGGCCGCC GGTCGCCTCGATTTTGGCATCTCGTATCAGGAAGGCGTCACCCAGGCGCGGGTAGAAGGAGTGCCGATTGTCTCGATTGC CGCGATCATTCAGCACAACACCAGCGGATTCGCCAGCCGGGTGGAAGAGGGCATCACCAGTCCTCGCGATTTTATCGGCA AAAAATATGGTGCATTCGGCTCGCCAATTGAAGAGGCAGTGATTCGCGGTCTGCTCGAATGCGCAGGTGTGGGCGATCAG TTTGATCAGGTGCAATTCGTAGACATCGGTAGCTCCGACTTTTTTGTCGCAACCGAACGCGATGAAGTCGATTTTGTCTG GATTTTCAAGGGCTGGACCGGCATCGAAGCCGAGGTGCGCGGCGTACCGCTCAACATTGTGATGATGAACGACGTGCAGT GCATCCCCGACTACTACACCCCGGTGATCATCACCAGCGAAAAGATGATTGCCGAACAACCCGATCTGGTGCGTCGCTTC CTGGCTGCGACGAGTGCCGGTTATCGCTTTGCCATTGATCGACCCGCCGAAGCAGCCGAGATTCTGTTGCAGGCCGCGCC TGAGCTTGATGCCGAACTGGTGCGCCGCAGTCAGCAATATCTGGCTACCCAGTATCAGGCCGATGCTCCCCGCTGGGGTG AACAGAAGCTCGAAGTCTGGCGAGCGTATGCCCAATGGATGGCCGAGCGTAACCTGATTGCCCGCATGATCGAACCGGAA AAGGCGTTTACCAATGAGTTTCTGCCCTAG
Upstream 100 bases:
>100_bases TCTTCGTGGCTGCGCTGGTCACGTCACTGCTCACAATTGCCCTGTTTACGCTGGTTAGTCTCCTCGAACGTTGGATTGTC TTCTGGAAAGGAGAACGTTG
Downstream 100 bases:
>100_bases TTAGGTGACGAGGTGGTATGTGGTGCGGTAGTAGAGCTTCCGCACCACTGCCCTCTGTCCAGGTGTGACATTTTTTACAA GAGCTGGGCTGTCGTGCTAC
Product: NMT1/THI5 like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MRRWLLLGLIVILTACGAATTPAVSEPPLTTVRVGLDWTPNTNHTGLYVAQAQGYYRDQGLQVEILGAQEGGTVEQLVAA GRLDFGISYQEGVTQARVEGVPIVSIAAIIQHNTSGFASRVEEGITSPRDFIGKKYGAFGSPIEEAVIRGLLECAGVGDQ FDQVQFVDIGSSDFFVATERDEVDFVWIFKGWTGIEAEVRGVPLNIVMMNDVQCIPDYYTPVIITSEKMIAEQPDLVRRF LAATSAGYRFAIDRPAEAAEILLQAAPELDAELVRRSQQYLATQYQADAPRWGEQKLEVWRAYAQWMAERNLIARMIEPE KAFTNEFLP
Sequences:
>Translated_329_residues MRRWLLLGLIVILTACGAATTPAVSEPPLTTVRVGLDWTPNTNHTGLYVAQAQGYYRDQGLQVEILGAQEGGTVEQLVAA GRLDFGISYQEGVTQARVEGVPIVSIAAIIQHNTSGFASRVEEGITSPRDFIGKKYGAFGSPIEEAVIRGLLECAGVGDQ FDQVQFVDIGSSDFFVATERDEVDFVWIFKGWTGIEAEVRGVPLNIVMMNDVQCIPDYYTPVIITSEKMIAEQPDLVRRF LAATSAGYRFAIDRPAEAAEILLQAAPELDAELVRRSQQYLATQYQADAPRWGEQKLEVWRAYAQWMAERNLIARMIEPE KAFTNEFLP >Mature_329_residues MRRWLLLGLIVILTACGAATTPAVSEPPLTTVRVGLDWTPNTNHTGLYVAQAQGYYRDQGLQVEILGAQEGGTVEQLVAA GRLDFGISYQEGVTQARVEGVPIVSIAAIIQHNTSGFASRVEEGITSPRDFIGKKYGAFGSPIEEAVIRGLLECAGVGDQ FDQVQFVDIGSSDFFVATERDEVDFVWIFKGWTGIEAEVRGVPLNIVMMNDVQCIPDYYTPVIITSEKMIAEQPDLVRRF LAATSAGYRFAIDRPAEAAEILLQAAPELDAELVRRSQQYLATQYQADAPRWGEQKLEVWRAYAQWMAERNLIARMIEPE KAFTNEFLP
Specific function: Probably involved in thiamine biosynthesis [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NMT1 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322616, Length=305, Percent_Identity=21.6393442622951, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319957, Length=307, Percent_Identity=22.1498371335505, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6321050, Length=307, Percent_Identity=22.1498371335505, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323997, Length=307, Percent_Identity=22.1498371335505, Blast_Score=73, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 36425; Mature: 36425
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWLLLGLIVILTACGAATTPAVSEPPLTTVRVGLDWTPNTNHTGLYVAQAQGYYRDQG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCEECCCC LQVEILGAQEGGTVEQLVAAGRLDFGISYQEGVTQARVEGVPIVSIAAIIQHNTSGFASR CEEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHCCCCHHHHH VEEGITSPRDFIGKKYGAFGSPIEEAVIRGLLECAGVGDQFDQVQFVDIGSSDFFVATER HHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECC DEVDFVWIFKGWTGIEAEVRGVPLNIVMMNDVQCIPDYYTPVIITSEKMIAEQPDLVRRF CCEEEEEEECCCCCCCEEECCCEEEEEEECCCEECCCCCCCEEEECHHHHHCCHHHHHHH LAATSAGYRFAIDRPAEAAEILLQAAPELDAELVRRSQQYLATQYQADAPRWGEQKLEVW HHHCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RAYAQWMAERNLIARMIEPEKAFTNEFLP HHHHHHHHHHHHHHHHCCCHHHHHHCCCC >Mature Secondary Structure MRRWLLLGLIVILTACGAATTPAVSEPPLTTVRVGLDWTPNTNHTGLYVAQAQGYYRDQG CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCEECCCC LQVEILGAQEGGTVEQLVAAGRLDFGISYQEGVTQARVEGVPIVSIAAIIQHNTSGFASR CEEEEEECCCCCHHHHHHHHCCCCCCCCHHHCCHHHHHCCCCHHHHHHHHHCCCCHHHHH VEEGITSPRDFIGKKYGAFGSPIEEAVIRGLLECAGVGDQFDQVQFVDIGSSDFFVATER HHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECC DEVDFVWIFKGWTGIEAEVRGVPLNIVMMNDVQCIPDYYTPVIITSEKMIAEQPDLVRRF CCEEEEEEECCCCCCCEEECCCEEEEEEECCCEECCCCCCCEEEECHHHHHCCHHHHHHH LAATSAGYRFAIDRPAEAAEILLQAAPELDAELVRRSQQYLATQYQADAPRWGEQKLEVW HHHCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RAYAQWMAERNLIARMIEPEKAFTNEFLP HHHHHHHHHHHHHHHHCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]