| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is tauC [C]
Identifier: 222523749
GI number: 222523749
Start: 553302
End: 554120
Strand: Reverse
Name: tauC [C]
Synonym: Chy400_0455
Alternate gene names: 222523749
Gene position: 554120-553302 (Counterclockwise)
Preceding gene: 222523750
Following gene: 222523748
Centisome position: 10.52
GC content: 61.05
Gene sequence:
>819_bases ATGAGTGACGATGTCTCGCAATCGATGCCTGCGACGCCGGTCACGGTAGCAGTGCGTCCTTCGTGGCGGGCCGGTCTGTT CGAGTATGGCCCGCCGACATTGCTCGTCATCAGCCTGCTGCTTCTGTGGGAGGGACTGGTCTGGTTTTTCGCGATCCCCG ACTGGCTGCTGCCGCCACCCTCGCGGATCGTCCGCACGTTGTTCGCCAGTCTGCCGGTGCTGGCCGGTCACACGCTGGCG ACGTTGACGGTGACCATCCCTGGCTTCGCGCTGGCACTGGTTGCCGGCTTTAGCCTGGGGATTGCCCTCGACGCCTCGCC CGTCCTGCGGCGAGCGATCTATCCGCTGCTCGTCACCTCGCAGACGGTACCGATTGTCGCGATTGCGCCGCTGCTGGTGG TCGGCTTCGGCTTTGGACTATTGCCGAAAGTGCTGGTCGTAGCGCTGATTACCTTCTTTCCGATTGTGGTCAATACGATT GATGGCCTGCAAAGTGCCGACCGTGATCAGCGCCGCCTGCTAGAGGCGATGGGAGCCAGCTACTGGCAACTACTCCGCCT CTTGCGATTACGGGCTGCGCTACCGGCCATCTTCACCGGGATCAAAGTCTCCATTACCTACAGCGTGATCGGGGCAGTCC TCGCCGAATGGATCGGCGCCAGTGCCGGATTGGGGGTCTACATCGCTCGCTCACTGCGTGCGTTTCGTACCGATCAGGTC TTCGTGGCTGCGCTGGTCACGTCACTGCTCACAATTGCCCTGTTTACGCTGGTTAGTCTCCTCGAACGTTGGATTGTCTT CTGGAAAGGAGAACGTTGA
Upstream 100 bases:
>100_bases CAAGAGGCGGTGCTGGCAGCCGGCGCCAGTCGCGTCTTTACCCTCATCAAGGTGGATTACGACCCCAATGGATCATCAAT CGCCGAAAAGCTGGCTAAGT
Downstream 100 bases:
>100_bases TGCGCAGATGGTTACTCTTAGGTTTGATCGTCATCCTGACGGCCTGTGGTGCGGCGACGACACCGGCAGTTTCTGAGCCG CCGTTGACCACTGTGCGGGT
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSDDVSQSMPATPVTVAVRPSWRAGLFEYGPPTLLVISLLLLWEGLVWFFAIPDWLLPPPSRIVRTLFASLPVLAGHTLA TLTVTIPGFALALVAGFSLGIALDASPVLRRAIYPLLVTSQTVPIVAIAPLLVVGFGFGLLPKVLVVALITFFPIVVNTI DGLQSADRDQRRLLEAMGASYWQLLRLLRLRAALPAIFTGIKVSITYSVIGAVLAEWIGASAGLGVYIARSLRAFRTDQV FVAALVTSLLTIALFTLVSLLERWIVFWKGER
Sequences:
>Translated_272_residues MSDDVSQSMPATPVTVAVRPSWRAGLFEYGPPTLLVISLLLLWEGLVWFFAIPDWLLPPPSRIVRTLFASLPVLAGHTLA TLTVTIPGFALALVAGFSLGIALDASPVLRRAIYPLLVTSQTVPIVAIAPLLVVGFGFGLLPKVLVVALITFFPIVVNTI DGLQSADRDQRRLLEAMGASYWQLLRLLRLRAALPAIFTGIKVSITYSVIGAVLAEWIGASAGLGVYIARSLRAFRTDQV FVAALVTSLLTIALFTLVSLLERWIVFWKGER >Mature_271_residues SDDVSQSMPATPVTVAVRPSWRAGLFEYGPPTLLVISLLLLWEGLVWFFAIPDWLLPPPSRIVRTLFASLPVLAGHTLAT LTVTIPGFALALVAGFSLGIALDASPVLRRAIYPLLVTSQTVPIVAIAPLLVVGFGFGLLPKVLVVALITFFPIVVNTID GLQSADRDQRRLLEAMGASYWQLLRLLRLRAALPAIFTGIKVSITYSVIGAVLAEWIGASAGLGVYIARSLRAFRTDQVF VAALVTSLLTIALFTLVSLLERWIVFWKGER
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=222, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI87081802, Length=150, Percent_Identity=34, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29489; Mature: 29357
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDVSQSMPATPVTVAVRPSWRAGLFEYGPPTLLVISLLLLWEGLVWFFAIPDWLLPPP CCCCCCCCCCCCCEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SRIVRTLFASLPVLAGHTLATLTVTIPGFALALVAGFSLGIALDASPVLRRAIYPLLVTS HHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCC QTVPIVAIAPLLVVGFGFGLLPKVLVVALITFFPIVVNTIDGLQSADRDQRRLLEAMGAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH YWQLLRLLRLRAALPAIFTGIKVSITYSVIGAVLAEWIGASAGLGVYIARSLRAFRTDQV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FVAALVTSLLTIALFTLVSLLERWIVFWKGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDDVSQSMPATPVTVAVRPSWRAGLFEYGPPTLLVISLLLLWEGLVWFFAIPDWLLPPP CCCCCCCCCCCCEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH SRIVRTLFASLPVLAGHTLATLTVTIPGFALALVAGFSLGIALDASPVLRRAIYPLLVTS HHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCC QTVPIVAIAPLLVVGFGFGLLPKVLVVALITFFPIVVNTIDGLQSADRDQRRLLEAMGAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH YWQLLRLLRLRAALPAIFTGIKVSITYSVIGAVLAEWIGASAGLGVYIARSLRAFRTDQV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FVAALVTSLLTIALFTLVSLLERWIVFWKGER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]