| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523701
Identifier: 222523701
GI number: 222523701
Start: 481473
End: 482720
Strand: Reverse
Name: 222523701
Synonym: Chy400_0407
Alternate gene names: NA
Gene position: 482720-481473 (Counterclockwise)
Preceding gene: 222523702
Following gene: 222523700
Centisome position: 9.16
GC content: 56.17
Gene sequence:
>1248_bases ATGCCGACGAACAAGACACGAGTCTCAGGCATAGGCCTCATTGTGCTGGCATTTGTTGCCTTCATTGCCCTCGGTCTGCC CGATGGCCTGCTCGGTGTTGGCTGGCCATCGATTCGCGACAGTTTTGCCGTTCCACTTGATGCAATTGGGATGCTGCTGA CGACGGTCATTGCCGGCTATATGATTTCGAGTTTCTTCAGTGGGTTCCTCCTCTCGCGGTTGGGGGTAGGTCGGATGTTG GCGGCAAGTTGTTTGCTGACCGGGATGGCGCTGATCGGTTATACCGTCGTTCCCCACTGGTGGATGATGGTAGCGCTGGG GGTTTTTGCCGGGTTGGGTGCGGGGGCGATTGACGCCGGTTTGAACACGTATGTGGCAGCGCATTTTGGTGAAACGCTGA TGCAGTGGCTCCATGCCAGTTGGGGTGTCGGGGTTACGATTGGTCCCATCCTGATGACGCTTGGGCTGACGACGCTGAAC ACGTGGCACTTTGGTTACCAGATTGTCGGTATTTTTCAGATCGCGCTGGCGATCTGTTTTGTCCTCACGTTAGCGATGTG GGCCAGCCATGCGCGCAATGTGCCATCAGGTGACGAGCCTGCCAAACGACTGACCGATTACCAGACACCGATGATCGAAA CGCTACGCCAGCCGCAGGTATGGCTGAGTGTCATGCTGTTTTTTCTGTATGTGGGCGCAGAGTCCTCTCTGGGAATCTGG ACTTATACGCTGTTGACCGAGTCGCGGGGTGTGGATCAGGCATTGGCAGGCTTTTTTGCAGGTAGCTACTGGTTTACCTT CACTATCGGGCGGATCGCGGCGGGGATGATTACGATCCGAACAGGAGCTACCAGACTGGTGTTCACGGGGCTGTCAGGCG CGCTGCTAGGTGCAGTTTTGCTGATCTGGAATCCCTCGCAATTGATGAATGTGGTAGCGGTGGCTTTAATTGGCCTGGCG ATTGCCCCGATCTTCCCGGCACTGATGTCTGACACCAGCATGCGCGTGGGCGATCACCATGCCGCCAATACGATAGGGAT GCAGATGACTGCAACAGGATTTGGTACCGCAGTGATCCCCGGCCTGATGGGTGTACTGGCGCAGCGCGTCTCGCTGGAGA TAATTCCGCTCTGTCTGCTGGTGGTATATGCCAGCCTATTCGGATTGTATCTTCTTGTCGTGCGGCTACGAAGGGTGTCG GTTACGGTTGTGGCAGCGAAGACCGGGCCAACCCAGGCTATCAAATAA
Upstream 100 bases:
>100_bases AGTCAGCGTAAGATTATTTTTGTCCGTTGTGCAATCGATTGCATAACATTCGTATGGCGCGACCCTCCCTTGCGTTCGAC AGAAAGGTTGTTCACGATTT
Downstream 100 bases:
>100_bases GGCTGTTTACGCTGAAGCATGCCTGATCACTGTTTAAAGCTCTCCAGATTGGACGACCGTGTGGTATGCACGTGCCGTTT ATAGCAGAAAGGAAATGAAA
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Fucose Permease; MFS Family Facilitator Transporter; Transporter Facilitator Family; Fucose Permease; Facilitator Superfamily Transporter; Multidrug Resistance Protein; Transporter Facilitator Family Protein
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MPTNKTRVSGIGLIVLAFVAFIALGLPDGLLGVGWPSIRDSFAVPLDAIGMLLTTVIAGYMISSFFSGFLLSRLGVGRML AASCLLTGMALIGYTVVPHWWMMVALGVFAGLGAGAIDAGLNTYVAAHFGETLMQWLHASWGVGVTIGPILMTLGLTTLN TWHFGYQIVGIFQIALAICFVLTLAMWASHARNVPSGDEPAKRLTDYQTPMIETLRQPQVWLSVMLFFLYVGAESSLGIW TYTLLTESRGVDQALAGFFAGSYWFTFTIGRIAAGMITIRTGATRLVFTGLSGALLGAVLLIWNPSQLMNVVAVALIGLA IAPIFPALMSDTSMRVGDHHAANTIGMQMTATGFGTAVIPGLMGVLAQRVSLEIIPLCLLVVYASLFGLYLLVVRLRRVS VTVVAAKTGPTQAIK
Sequences:
>Translated_415_residues MPTNKTRVSGIGLIVLAFVAFIALGLPDGLLGVGWPSIRDSFAVPLDAIGMLLTTVIAGYMISSFFSGFLLSRLGVGRML AASCLLTGMALIGYTVVPHWWMMVALGVFAGLGAGAIDAGLNTYVAAHFGETLMQWLHASWGVGVTIGPILMTLGLTTLN TWHFGYQIVGIFQIALAICFVLTLAMWASHARNVPSGDEPAKRLTDYQTPMIETLRQPQVWLSVMLFFLYVGAESSLGIW TYTLLTESRGVDQALAGFFAGSYWFTFTIGRIAAGMITIRTGATRLVFTGLSGALLGAVLLIWNPSQLMNVVAVALIGLA IAPIFPALMSDTSMRVGDHHAANTIGMQMTATGFGTAVIPGLMGVLAQRVSLEIIPLCLLVVYASLFGLYLLVVRLRRVS VTVVAAKTGPTQAIK >Mature_414_residues PTNKTRVSGIGLIVLAFVAFIALGLPDGLLGVGWPSIRDSFAVPLDAIGMLLTTVIAGYMISSFFSGFLLSRLGVGRMLA ASCLLTGMALIGYTVVPHWWMMVALGVFAGLGAGAIDAGLNTYVAAHFGETLMQWLHASWGVGVTIGPILMTLGLTTLNT WHFGYQIVGIFQIALAICFVLTLAMWASHARNVPSGDEPAKRLTDYQTPMIETLRQPQVWLSVMLFFLYVGAESSLGIWT YTLLTESRGVDQALAGFFAGSYWFTFTIGRIAAGMITIRTGATRLVFTGLSGALLGAVLLIWNPSQLMNVVAVALIGLAI APIFPALMSDTSMRVGDHHAANTIGMQMTATGFGTAVIPGLMGVLAQRVSLEIIPLCLLVVYASLFGLYLLVVRLRRVSV TVVAAKTGPTQAIK
Specific function: Unknown
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324435, Length=405, Percent_Identity=23.9506172839506, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44195; Mature: 44064
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNKTRVSGIGLIVLAFVAFIALGLPDGLLGVGWPSIRDSFAVPLDAIGMLLTTVIAGY CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHH MISSFFSGFLLSRLGVGRMLAASCLLTGMALIGYTVVPHWWMMVALGVFAGLGAGAIDAG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LNTYVAAHFGETLMQWLHASWGVGVTIGPILMTLGLTTLNTWHFGYQIVGIFQIALAICF HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTLAMWASHARNVPSGDEPAKRLTDYQTPMIETLRQPQVWLSVMLFFLYVGAESSLGIW HHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCE TYTLLTESRGVDQALAGFFAGSYWFTFTIGRIAAGMITIRTGATRLVFTGLSGALLGAVL EEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHH LIWNPSQLMNVVAVALIGLAIAPIFPALMSDTSMRVGDHHAANTIGMQMTATGFGTAVIP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEECCCHHHHHH GLMGVLAQRVSLEIIPLCLLVVYASLFGLYLLVVRLRRVSVTVVAAKTGPTQAIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC >Mature Secondary Structure PTNKTRVSGIGLIVLAFVAFIALGLPDGLLGVGWPSIRDSFAVPLDAIGMLLTTVIAGY CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHH MISSFFSGFLLSRLGVGRMLAASCLLTGMALIGYTVVPHWWMMVALGVFAGLGAGAIDAG HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LNTYVAAHFGETLMQWLHASWGVGVTIGPILMTLGLTTLNTWHFGYQIVGIFQIALAICF HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTLAMWASHARNVPSGDEPAKRLTDYQTPMIETLRQPQVWLSVMLFFLYVGAESSLGIW HHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCE TYTLLTESRGVDQALAGFFAGSYWFTFTIGRIAAGMITIRTGATRLVFTGLSGALLGAVL EEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCHHHHHHHHH LIWNPSQLMNVVAVALIGLAIAPIFPALMSDTSMRVGDHHAANTIGMQMTATGFGTAVIP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEECCCHHHHHH GLMGVLAQRVSLEIIPLCLLVVYASLFGLYLLVVRLRRVSVTVVAAKTGPTQAIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA