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The map label for this gene is ydeL [H]

Identifier: 222152137

GI number: 222152137

Start: 2028857

End: 2030191

Strand: Direct

Name: ydeL [H]

Synonym: MCCL_1894

Alternate gene names: 222152137

Gene position: 2028857-2030191 (Clockwise)

Preceding gene: 222152133

Following gene: 222152166

Centisome position: 96.51

GC content: 33.78

Gene sequence:

>1335_bases
ATGGAGATACTTACATACAAATTCAGTGATCAAAAATATTTATATACACAATTATATGAAAACATAAAAAGAGATATCTT
ATCTGGAAAATTAAAACATAAAGAAAAACTTCCTTCGAAACGTAAACTCAGTACACATCTGAACTTAAGTGGGACGACAA
TCGAAATCGCATATCAGCAATTACTTGATGAAGGATATATATATTCAGTACCAAAAGTAGGTTTCTTTGTAGAAGATATT
CAGACGATAAATATAGCACCAGAAAGTAAAGCAGACATACCAGATCATCATCATAAGCAAAGACAATTATCTCTTAAGAT
AGAAGACAGTCATATTAAATCATTTCCATTTCACAAATTCAGAAAATACGCACGAGATGCATTTGAACAAGATCAGTATC
ATTTGTTAGAACGTGGTGATATTCAGGGGGAAGAAATATTACGCAATGAAATTAGGCGCTATCTATACCACTCTCGCGGA
GTGAACTGTGAAAACTATCAAATCATTATCGGTAGTTCTACAGAACAGCTGTTTACACTCCTTACTAAAATATTAGGTAA
CAGTTCATATATATTAGAAAATCCTGGTTATCCACTCATTCGAAAAGTATTACAAAGTGAACATAAACACTATCAGTATA
TCGATGTTGATGAAGAAGGGCTCATAGCTTCATCACTTCCTGAAGATGTTGAAATTGTGCACGTTACACCAAGTCATCAG
TTCCCAACAGGTGTCTTACTCAGCGCAAAGCGCAGAACCGAACTGATTAATTGGTCTAAACAAAAACAAAATCGCTACAT
TATTGAAGATGATTATGATAGTGAATTTAGATATAAAGGAAGGCCTCTCGCTGCATTACAAGGTATGAGCAATGAACGTG
TAATATATATGAGTACATTCTCAAAATCAATCTTCCCAAGTATCAGATGTGCCTATTTAGTACTGCCTGATAAACTGCTG
GAGTTGTATAAATCGATGTCAAAGCCGAATAATACTGTACCAAGACATATTCAATATATGATCGCTGCATTTATGAAGGA
TGGTGAGTTTGAACGGAACATTAACAGAATGAGAAAGGAATATAAGAAGAAATTAGAGCTTGTACTTCAGTCTGTTAAAG
AGACCTTTAAGCAAAGCAATATAACTGGCAGTGATGCGGGTATGCACTTCGTACTCGAGACGACAGAAGTTATCAATAAA
GATAGTATCGCAATTAATACGATAGATGATTACTATTCTGGAGAAAAAACAAGTTATAAAAATCAGTATATTATCGGATT
TGGAAGTATCGAAGACGATGAAATCTCTTCTGTTATTAAACGACTTAAAAAGTAA

Upstream 100 bases:

>100_bases
ATACACCTCATATTCTGAATTTACACTACAATTACTAATGTATAATAGTTTCTGATATTATAAAAGTATCAGTTATCAAT
AAAATAAAGGGGTCAGTTTC

Downstream 100 bases:

>100_bases
ATCTACAATAAATAAAAGTAACTACATGAAAATGCAGTTACTTTTTTGTATAAAAAAAGAGACCTAACAGGTCCCCAGTG
TGCGGCTCATCGCATCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MEILTYKFSDQKYLYTQLYENIKRDILSGKLKHKEKLPSKRKLSTHLNLSGTTIEIAYQQLLDEGYIYSVPKVGFFVEDI
QTINIAPESKADIPDHHHKQRQLSLKIEDSHIKSFPFHKFRKYARDAFEQDQYHLLERGDIQGEEILRNEIRRYLYHSRG
VNCENYQIIIGSSTEQLFTLLTKILGNSSYILENPGYPLIRKVLQSEHKHYQYIDVDEEGLIASSLPEDVEIVHVTPSHQ
FPTGVLLSAKRRTELINWSKQKQNRYIIEDDYDSEFRYKGRPLAALQGMSNERVIYMSTFSKSIFPSIRCAYLVLPDKLL
ELYKSMSKPNNTVPRHIQYMIAAFMKDGEFERNINRMRKEYKKKLELVLQSVKETFKQSNITGSDAGMHFVLETTEVINK
DSIAINTIDDYYSGEKTSYKNQYIIGFGSIEDDEISSVIKRLKK

Sequences:

>Translated_444_residues
MEILTYKFSDQKYLYTQLYENIKRDILSGKLKHKEKLPSKRKLSTHLNLSGTTIEIAYQQLLDEGYIYSVPKVGFFVEDI
QTINIAPESKADIPDHHHKQRQLSLKIEDSHIKSFPFHKFRKYARDAFEQDQYHLLERGDIQGEEILRNEIRRYLYHSRG
VNCENYQIIIGSSTEQLFTLLTKILGNSSYILENPGYPLIRKVLQSEHKHYQYIDVDEEGLIASSLPEDVEIVHVTPSHQ
FPTGVLLSAKRRTELINWSKQKQNRYIIEDDYDSEFRYKGRPLAALQGMSNERVIYMSTFSKSIFPSIRCAYLVLPDKLL
ELYKSMSKPNNTVPRHIQYMIAAFMKDGEFERNINRMRKEYKKKLELVLQSVKETFKQSNITGSDAGMHFVLETTEVINK
DSIAINTIDDYYSGEKTSYKNQYIIGFGSIEDDEISSVIKRLKK
>Mature_444_residues
MEILTYKFSDQKYLYTQLYENIKRDILSGKLKHKEKLPSKRKLSTHLNLSGTTIEIAYQQLLDEGYIYSVPKVGFFVEDI
QTINIAPESKADIPDHHHKQRQLSLKIEDSHIKSFPFHKFRKYARDAFEQDQYHLLERGDIQGEEILRNEIRRYLYHSRG
VNCENYQIIIGSSTEQLFTLLTKILGNSSYILENPGYPLIRKVLQSEHKHYQYIDVDEEGLIASSLPEDVEIVHVTPSHQ
FPTGVLLSAKRRTELINWSKQKQNRYIIEDDYDSEFRYKGRPLAALQGMSNERVIYMSTFSKSIFPSIRCAYLVLPDKLL
ELYKSMSKPNNTVPRHIQYMIAAFMKDGEFERNINRMRKEYKKKLELVLQSVKETFKQSNITGSDAGMHFVLETTEVINK
DSIAINTIDDYYSGEKTSYKNQYIIGFGSIEDDEISSVIKRLKK

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 51919; Mature: 51919

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILTYKFSDQKYLYTQLYENIKRDILSGKLKHKEKLPSKRKLSTHLNLSGTTIEIAYQQ
CCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHEECCCCCCHHHHHHH
LLDEGYIYSVPKVGFFVEDIQTINIAPESKADIPDHHHKQRQLSLKIEDSHIKSFPFHKF
HHCCCCEEECCCCCCEEECEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH
RKYARDAFEQDQYHLLERGDIQGEEILRNEIRRYLYHSRGVNCENYQIIIGSSTEQLFTL
HHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH
LTKILGNSSYILENPGYPLIRKVLQSEHKHYQYIDVDEEGLIASSLPEDVEIVHVTPSHQ
HHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCC
FPTGVLLSAKRRTELINWSKQKQNRYIIEDDYDSEFRYKGRPLAALQGMSNERVIYMSTF
CCCCCEEECHHHHHHHCCHHHHCCCEEEECCCCCCCEECCCCHHHHCCCCCCEEEEEECC
SKSIFPSIRCAYLVLPDKLLELYKSMSKPNNTVPRHIQYMIAAFMKDGEFERNINRMRKE
CHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
YKKKLELVLQSVKETFKQSNITGSDAGMHFVLETTEVINKDSIAINTIDDYYSGEKTSYK
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCEEEEECHHHCCCCCCCCC
NQYIIGFGSIEDDEISSVIKRLKK
CEEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEILTYKFSDQKYLYTQLYENIKRDILSGKLKHKEKLPSKRKLSTHLNLSGTTIEIAYQQ
CCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHEECCCCCCHHHHHHH
LLDEGYIYSVPKVGFFVEDIQTINIAPESKADIPDHHHKQRQLSLKIEDSHIKSFPFHKF
HHCCCCEEECCCCCCEEECEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHH
RKYARDAFEQDQYHLLERGDIQGEEILRNEIRRYLYHSRGVNCENYQIIIGSSTEQLFTL
HHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH
LTKILGNSSYILENPGYPLIRKVLQSEHKHYQYIDVDEEGLIASSLPEDVEIVHVTPSHQ
HHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCC
FPTGVLLSAKRRTELINWSKQKQNRYIIEDDYDSEFRYKGRPLAALQGMSNERVIYMSTF
CCCCCEEECHHHHHHHCCHHHHCCCEEEECCCCCCCEECCCCHHHHCCCCCCEEEEEECC
SKSIFPSIRCAYLVLPDKLLELYKSMSKPNNTVPRHIQYMIAAFMKDGEFERNINRMRKE
CHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
YKKKLELVLQSVKETFKQSNITGSDAGMHFVLETTEVINKDSIAINTIDDYYSGEKTSYK
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCEEEEECHHHCCCCCCCCC
NQYIIGFGSIEDDEISSVIKRLKK
CEEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]