| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yhaA [H]
Identifier: 222152102
GI number: 222152102
Start: 1991684
End: 1992862
Strand: Direct
Name: yhaA [H]
Synonym: MCCL_1859
Alternate gene names: 222152102
Gene position: 1991684-1992862 (Clockwise)
Preceding gene: 222152101
Following gene: 222152103
Centisome position: 94.74
GC content: 38.76
Gene sequence:
>1179_bases ATGTGTATGATAACATTAGTCAATAAATACTATGATGAATTAGTAGCAATAAGACGACATTTGCACATGCATCCAGAGCT CTCTTTCCAAGAAGAAAAGACACCTGAGTATATCGCAGCATTTCTTGAGGAGCAAGGTATTACAGTAGAACGTAATGTCG GTGGTAGAGGAGTTGTCGGACGGTTAATCAAAGATGAATCTCTTCCGACGCTTGCGATACGTGCAGACTTTGATGCACTA CCAATACAGGACGAGAAAGATGCACCTTATAAATCACAAGTCCCTGGTGTGATGCATGCTTGTGGACATGATGCACATAC AGCCGTACTTATGATTACGGCAAAGATTCTCGCAAAGAACTTTGATAAAATAAACGGCAATCTTGTTTTTATACATCAGC ATGCTGAAGAAGTAGATCCTGGTGGTGCAATACAAATGATTGCAGACAATTGTTTAAAAGGGGTAGATGCTATCATCGGA CAACATGTCTCTAGTGATCTAGACGTAGGAAAATTAGGCTATAAATACGGGACTGCAACCGGAATACCTGATGATTTCTG GATTACAATAAAAGGGAAAGGTGGACATGCAGCTCATCCTGACACTACGATCGATCCTGTGGCTGCTGCTATCAGACTGT GTAATGATCTTCAATATATAGTTTCACGTAAAACAAGCGCTACTACACCTACTGTCATATCGGTAACACAACTACAAGCC GGAGACCAAAATAATGTCATCCCTGATAGTGCTAAAATAGCCGGTACCATAAGAACATTTGACCCGACAACACAAAAATT GATGATAGATGAATTAAAAAGATGTCTTGAAGGACTTGTTACTACAATGGGTATTACTTATGACCTTAAATATAGTAAAG GCTATCCACCTGTAGTAAATACTACCAATGAGACTGACCTTATTGTTAATGCTGCTAGAAAGATAGAAGATATCGAGGAA CTTGTCGAACTAAAACCTTCTCTTGGCGGAGAAGATTTCTCTTACTATTTACAACGTGTTCCGGGTTCTTTCTTCTATAC AGGAACACGTAACGAAAACTTTAAAGCTGATTTTCCGCATCATCATCCGAAATTTGATATTGATGAGAAAGGCATGCTCA ATGCAGTTAAAGTATTTTTACAAGCTACTGAAGACTTTTTCAACAAGGAGGATAAATAA
Upstream 100 bases:
>100_bases AAAGGGATTACCGCTCCTCACCATCATCCTCTCTTTGATTTTGATGAACAAGCTATGATTGATGCTGTAAAGTTATTCTT ACTTATATTAAAAGAGGAGC
Downstream 100 bases:
>100_bases TGAACTGGATAGATGAGGTCATTAACTATAAAGAAGAACTTATAGAAATTAGACGTTACTTACATATGAACCCGGAACTC TCTTTTCAAGAAAAAAATAC
Product: N-acyl-L-amino acid amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MCMITLVNKYYDELVAIRRHLHMHPELSFQEEKTPEYIAAFLEEQGITVERNVGGRGVVGRLIKDESLPTLAIRADFDAL PIQDEKDAPYKSQVPGVMHACGHDAHTAVLMITAKILAKNFDKINGNLVFIHQHAEEVDPGGAIQMIADNCLKGVDAIIG QHVSSDLDVGKLGYKYGTATGIPDDFWITIKGKGGHAAHPDTTIDPVAAAIRLCNDLQYIVSRKTSATTPTVISVTQLQA GDQNNVIPDSAKIAGTIRTFDPTTQKLMIDELKRCLEGLVTTMGITYDLKYSKGYPPVVNTTNETDLIVNAARKIEDIEE LVELKPSLGGEDFSYYLQRVPGSFFYTGTRNENFKADFPHHHPKFDIDEKGMLNAVKVFLQATEDFFNKEDK
Sequences:
>Translated_392_residues MCMITLVNKYYDELVAIRRHLHMHPELSFQEEKTPEYIAAFLEEQGITVERNVGGRGVVGRLIKDESLPTLAIRADFDAL PIQDEKDAPYKSQVPGVMHACGHDAHTAVLMITAKILAKNFDKINGNLVFIHQHAEEVDPGGAIQMIADNCLKGVDAIIG QHVSSDLDVGKLGYKYGTATGIPDDFWITIKGKGGHAAHPDTTIDPVAAAIRLCNDLQYIVSRKTSATTPTVISVTQLQA GDQNNVIPDSAKIAGTIRTFDPTTQKLMIDELKRCLEGLVTTMGITYDLKYSKGYPPVVNTTNETDLIVNAARKIEDIEE LVELKPSLGGEDFSYYLQRVPGSFFYTGTRNENFKADFPHHHPKFDIDEKGMLNAVKVFLQATEDFFNKEDK >Mature_392_residues MCMITLVNKYYDELVAIRRHLHMHPELSFQEEKTPEYIAAFLEEQGITVERNVGGRGVVGRLIKDESLPTLAIRADFDAL PIQDEKDAPYKSQVPGVMHACGHDAHTAVLMITAKILAKNFDKINGNLVFIHQHAEEVDPGGAIQMIADNCLKGVDAIIG QHVSSDLDVGKLGYKYGTATGIPDDFWITIKGKGGHAAHPDTTIDPVAAAIRLCNDLQYIVSRKTSATTPTVISVTQLQA GDQNNVIPDSAKIAGTIRTFDPTTQKLMIDELKRCLEGLVTTMGITYDLKYSKGYPPVVNTTNETDLIVNAARKIEDIEE LVELKPSLGGEDFSYYLQRVPGSFFYTGTRNENFKADFPHHHPKFDIDEKGMLNAVKVFLQATEDFFNKEDK
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=381, Percent_Identity=26.246719160105, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 43421; Mature: 43421
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMITLVNKYYDELVAIRRHLHMHPELSFQEEKTPEYIAAFLEEQGITVERNVGGRGVVG CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHH RLIKDESLPTLAIRADFDALPIQDEKDAPYKSQVPGVMHACGHDAHTAVLMITAKILAKN HHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH FDKINGNLVFIHQHAEEVDPGGAIQMIADNCLKGVDAIIGQHVSSDLDVGKLGYKYGTAT HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC GIPDDFWITIKGKGGHAAHPDTTIDPVAAAIRLCNDLQYIVSRKTSATTPTVISVTQLQA CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC GDQNNVIPDSAKIAGTIRTFDPTTQKLMIDELKRCLEGLVTTMGITYDLKYSKGYPPVVN CCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC TTNETDLIVNAARKIEDIEELVELKPSLGGEDFSYYLQRVPGSFFYTGTRNENFKADFPH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCC HHPKFDIDEKGMLNAVKVFLQATEDFFNKEDK CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MCMITLVNKYYDELVAIRRHLHMHPELSFQEEKTPEYIAAFLEEQGITVERNVGGRGVVG CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHH RLIKDESLPTLAIRADFDALPIQDEKDAPYKSQVPGVMHACGHDAHTAVLMITAKILAKN HHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH FDKINGNLVFIHQHAEEVDPGGAIQMIADNCLKGVDAIIGQHVSSDLDVGKLGYKYGTAT HHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC GIPDDFWITIKGKGGHAAHPDTTIDPVAAAIRLCNDLQYIVSRKTSATTPTVISVTQLQA CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC GDQNNVIPDSAKIAGTIRTFDPTTQKLMIDELKRCLEGLVTTMGITYDLKYSKGYPPVVN CCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC TTNETDLIVNAARKIEDIEELVELKPSLGGEDFSYYLQRVPGSFFYTGTRNENFKADFPH CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCC HHPKFDIDEKGMLNAVKVFLQATEDFFNKEDK CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]