Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is yhaA [H]

Identifier: 222152101

GI number: 222152101

Start: 1990429

End: 1991709

Strand: Direct

Name: yhaA [H]

Synonym: MCCL_1858

Alternate gene names: 222152101

Gene position: 1990429-1991709 (Clockwise)

Preceding gene: 222152095

Following gene: 222152102

Centisome position: 94.68

GC content: 37.31

Gene sequence:

>1281_bases
ATGAACTTGCTATTGAAATCTTGCATACAAAAAAAGTTTAAATATTCTAAACTTTTTGTTACACTAGAAATATTAAATTT
TTTTGGAGTAAGGAGCGTTGAAATGGACATTGAACAATTAATTGCTAACGATTTTGATAAGATGGTGGAGATCAGAAGAT
ATCTTCATCAGCATCCTGAAATTAGTTTTCATGAAGAAAAGACATACGCATATATATTAGATTCTTTAACTCACCTCAAA
CATTTCAAAATTAGAGAACATGTGGGCGGTAAAGGTATTGTAGCAAACATATCAAATGGAGAAGGTCCGTCTATCGCTCT
ACGTGCGGACTTTGATGCATTGCCGATACAAGATCAGAAAGATGTAGCTTACCGCTCTAAAAATGATGGCGTTATGCATG
CTTGTGGACATGACGGACATACTTCAATTCTACTCTCTGTTGCAAGACTTCTAAATTCAACTTATGAATTAATAACAGGG
TCGGTCACGCTAATTTTTCAATTTGCTGAAGAAGTCGCTCCAGGTGGTGCACATGATATGGTAAATGACGGAGCACTATC
TGGTGTTGATAAAGTTTATGGTAATCATCTATGGTCTCCTTATGAACAAGGTGCTATATATTCAAGAAAAGGTGCTTTAA
TGGCTAGCCCAGATACATTTCATATTACTGTGCAAGGAAAAGGAGGTCATGGAGCTCACCCCGATACAACAGTAGATGCC
ATTGTTGTTCTAGCCGAACTCATTATCAATTTGCAGACAATCGTTTCACGTAACGTGCCTCCTACTGAACAAGCTGTTCT
AACAATAGGTAAAGTCGTCGCAGGCGATACTTTTAACGTCATCAGTGATAGCGCTTATTGTACAGGTACAGTACGGACTT
TTAATCCAGAAGTTAAAGCGTTGATAAAAACAGCAATGGATAGAGAAATAAAAGGCATTACCGCAGCTAAAGGAGCAGGA
TATACATTCGATTATATTGATGGCTATCCTGCAGTAATAAATGATACGCAATCGGTAGAAGTCATACAGCGCGCTGCACA
ACATGCAGGGATTGAATATAAAGAAACGGAGCAATTAATGATCGGTGAAGACTTTTCATACTACATACAGCATAAACCAG
GCGCATTCTTTTTAACTGCAGCAGGAAATAAAGCAAAAGGGATTACCGCTCCTCACCATCATCCTCTCTTTGATTTTGAT
GAACAAGCTATGATTGATGCTGTAAAGTTATTCTTACTTATATTAAAAGAGGAGCATGTGTATGATAACATTAGTCAATA
A

Upstream 100 bases:

>100_bases
TCTAAACGTTCCGTTAAGAACGATTGTAAAGCTTTAGTCATAAATTGACACCCCTTTTCATTTTCACTATCATCATAACA
CAACTATTTTAGGAGTTCTA

Downstream 100 bases:

>100_bases
ATACTATGATGAATTAGTAGCAATAAGACGACATTTGCACATGCATCCAGAGCTCTCTTTCCAAGAAGAAAAGACACCTG
AGTATATCGCAGCATTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNLLLKSCIQKKFKYSKLFVTLEILNFFGVRSVEMDIEQLIANDFDKMVEIRRYLHQHPEISFHEEKTYAYILDSLTHLK
HFKIREHVGGKGIVANISNGEGPSIALRADFDALPIQDQKDVAYRSKNDGVMHACGHDGHTSILLSVARLLNSTYELITG
SVTLIFQFAEEVAPGGAHDMVNDGALSGVDKVYGNHLWSPYEQGAIYSRKGALMASPDTFHITVQGKGGHGAHPDTTVDA
IVVLAELIINLQTIVSRNVPPTEQAVLTIGKVVAGDTFNVISDSAYCTGTVRTFNPEVKALIKTAMDREIKGITAAKGAG
YTFDYIDGYPAVINDTQSVEVIQRAAQHAGIEYKETEQLMIGEDFSYYIQHKPGAFFLTAAGNKAKGITAPHHHPLFDFD
EQAMIDAVKLFLLILKEEHVYDNISQ

Sequences:

>Translated_426_residues
MNLLLKSCIQKKFKYSKLFVTLEILNFFGVRSVEMDIEQLIANDFDKMVEIRRYLHQHPEISFHEEKTYAYILDSLTHLK
HFKIREHVGGKGIVANISNGEGPSIALRADFDALPIQDQKDVAYRSKNDGVMHACGHDGHTSILLSVARLLNSTYELITG
SVTLIFQFAEEVAPGGAHDMVNDGALSGVDKVYGNHLWSPYEQGAIYSRKGALMASPDTFHITVQGKGGHGAHPDTTVDA
IVVLAELIINLQTIVSRNVPPTEQAVLTIGKVVAGDTFNVISDSAYCTGTVRTFNPEVKALIKTAMDREIKGITAAKGAG
YTFDYIDGYPAVINDTQSVEVIQRAAQHAGIEYKETEQLMIGEDFSYYIQHKPGAFFLTAAGNKAKGITAPHHHPLFDFD
EQAMIDAVKLFLLILKEEHVYDNISQ
>Mature_426_residues
MNLLLKSCIQKKFKYSKLFVTLEILNFFGVRSVEMDIEQLIANDFDKMVEIRRYLHQHPEISFHEEKTYAYILDSLTHLK
HFKIREHVGGKGIVANISNGEGPSIALRADFDALPIQDQKDVAYRSKNDGVMHACGHDGHTSILLSVARLLNSTYELITG
SVTLIFQFAEEVAPGGAHDMVNDGALSGVDKVYGNHLWSPYEQGAIYSRKGALMASPDTFHITVQGKGGHGAHPDTTVDA
IVVLAELIINLQTIVSRNVPPTEQAVLTIGKVVAGDTFNVISDSAYCTGTVRTFNPEVKALIKTAMDREIKGITAAKGAG
YTFDYIDGYPAVINDTQSVEVIQRAAQHAGIEYKETEQLMIGEDFSYYIQHKPGAFFLTAAGNKAKGITAPHHHPLFDFD
EQAMIDAVKLFLLILKEEHVYDNISQ

Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=338, Percent_Identity=31.0650887573964, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 47082; Mature: 47082

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLLKSCIQKKFKYSKLFVTLEILNFFGVRSVEMDIEQLIANDFDKMVEIRRYLHQHPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ISFHEEKTYAYILDSLTHLKHFKIREHVGGKGIVANISNGEGPSIALRADFDALPIQDQK
CCEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
DVAYRSKNDGVMHACGHDGHTSILLSVARLLNSTYELITGSVTLIFQFAEEVAPGGAHDM
CHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
VNDGALSGVDKVYGNHLWSPYEQGAIYSRKGALMASPDTFHITVQGKGGHGAHPDTTVDA
CCCCHHCCHHHHHHCCCCCCHHCCCEEECCCCEEECCCEEEEEEEECCCCCCCCCHHHHH
IVVLAELIINLQTIVSRNVPPTEQAVLTIGKVVAGDTFNVISDSAYCTGTVRTFNPEVKA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEEEEECCHHHHH
LIKTAMDREIKGITAAKGAGYTFDYIDGYPAVINDTQSVEVIQRAAQHAGIEYKETEQLM
HHHHHHHHHHCCCEECCCCCCEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCEE
IGEDFSYYIQHKPGAFFLTAAGNKAKGITAPHHHPLFDFDEQAMIDAVKLFLLILKEEHV
ECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YDNISQ
HCCCCC
>Mature Secondary Structure
MNLLLKSCIQKKFKYSKLFVTLEILNFFGVRSVEMDIEQLIANDFDKMVEIRRYLHQHPE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ISFHEEKTYAYILDSLTHLKHFKIREHVGGKGIVANISNGEGPSIALRADFDALPIQDQK
CCEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
DVAYRSKNDGVMHACGHDGHTSILLSVARLLNSTYELITGSVTLIFQFAEEVAPGGAHDM
CHHEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
VNDGALSGVDKVYGNHLWSPYEQGAIYSRKGALMASPDTFHITVQGKGGHGAHPDTTVDA
CCCCHHCCHHHHHHCCCCCCHHCCCEEECCCCEEECCCEEEEEEEECCCCCCCCCHHHHH
IVVLAELIINLQTIVSRNVPPTEQAVLTIGKVVAGDTFNVISDSAYCTGTVRTFNPEVKA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEEEEECCHHHHH
LIKTAMDREIKGITAAKGAGYTFDYIDGYPAVINDTQSVEVIQRAAQHAGIEYKETEQLM
HHHHHHHHHHCCCEECCCCCCEECCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCEE
IGEDFSYYIQHKPGAFFLTAAGNKAKGITAPHHHPLFDFDEQAMIDAVKLFLLILKEEHV
ECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YDNISQ
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]