| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222152049
Identifier: 222152049
GI number: 222152049
Start: 1939939
End: 1940373
Strand: Direct
Name: 222152049
Synonym: MCCL_1806
Alternate gene names: NA
Gene position: 1939939-1940373 (Clockwise)
Preceding gene: 222152045
Following gene: 222152053
Centisome position: 92.28
GC content: 32.41
Gene sequence:
>435_bases ATGATAAAATTAGAACAGTCAATATTTAAAACAGCAAGCCAAGTCGAGCATGTTTTAAATGCTATACTTTTAAAACGATT CGGGATTACATTTGCTGAATTTCTTATTTTATACAAAGTATATAAAGATAGTAATAGCTCAGTGACAGACATACAAGATG ATATTCAATATAAGATGGATTCTGCAAGCAAAAAGACTAAGAAACTTAGGGACTTAGGGCTTGTCGTGAAAGAACGCTGT AAAGATGATGAACGTAAAGTATGTGTGAAAATTACAGATAGTGGTTGTGAAATCGTCAAACTAGTCATGGAGCATCAACA ACGTATTTATGATAGTGAAGAAAATACTTTCACAAAAGAGGACGGCGAAACCCTATTTATCCTTCTTGATAAATACAGAA AAGCTTTCCATCAGTATACTGATACGATTAACTAA
Upstream 100 bases:
>100_bases ATAGTTATCATGCAAAATATTATACATTGACCGTAATTATTTCGTTCTATCGTCTCAATCAGTCATAATTTTAATATACG TCAAAAAAAAGGGAGTTAAA
Downstream 100 bases:
>100_bases AAAACTGGGTGCACTTCAATGTGCATCCAGTTTTTTACAATTCTGCAGATTGTACTTGTTGTCGTAAAAATCCCTGCTGT TCTTCTTTATTTATCTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MIKLEQSIFKTASQVEHVLNAILLKRFGITFAEFLILYKVYKDSNSSVTDIQDDIQYKMDSASKKTKKLRDLGLVVKERC KDDERKVCVKITDSGCEIVKLVMEHQQRIYDSEENTFTKEDGETLFILLDKYRKAFHQYTDTIN
Sequences:
>Translated_144_residues MIKLEQSIFKTASQVEHVLNAILLKRFGITFAEFLILYKVYKDSNSSVTDIQDDIQYKMDSASKKTKKLRDLGLVVKERC KDDERKVCVKITDSGCEIVKLVMEHQQRIYDSEENTFTKEDGETLFILLDKYRKAFHQYTDTIN >Mature_144_residues MIKLEQSIFKTASQVEHVLNAILLKRFGITFAEFLILYKVYKDSNSSVTDIQDDIQYKMDSASKKTKKLRDLGLVVKERC KDDERKVCVKITDSGCEIVKLVMEHQQRIYDSEENTFTKEDGETLFILLDKYRKAFHQYTDTIN
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16855; Mature: 16855
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLEQSIFKTASQVEHVLNAILLKRFGITFAEFLILYKVYKDSNSSVTDIQDDIQYKMD CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SASKKTKKLRDLGLVVKERCKDDERKVCVKITDSGCEIVKLVMEHQQRIYDSEENTFTKE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECC DGETLFILLDKYRKAFHQYTDTIN CCCEEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKLEQSIFKTASQVEHVLNAILLKRFGITFAEFLILYKVYKDSNSSVTDIQDDIQYKMD CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SASKKTKKLRDLGLVVKERCKDDERKVCVKITDSGCEIVKLVMEHQQRIYDSEENTFTKE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECC DGETLFILLDKYRKAFHQYTDTIN CCCEEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA