| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yeaB [H]
Identifier: 222151812
GI number: 222151812
Start: 1692847
End: 1693728
Strand: Direct
Name: yeaB [H]
Synonym: MCCL_1568
Alternate gene names: 222151812
Gene position: 1692847-1693728 (Clockwise)
Preceding gene: 222151803
Following gene: 222151816
Centisome position: 80.52
GC content: 39.57
Gene sequence:
>882_bases GTGAACAAGATGCAGGTTAAAGATCAGTTACAACAAGCTCAAAAAGGAGCTAAAGTGAGTATTATCATGTATGTACTGCT CACAACTTTCAAGTTGTTATTCGGCTATATCCACGGATCTCAGGCGCTTGTCGCAGACGGTCTTAATAACGCGACCGATG TTGTAAGCTCAGTAGCTCTGCTTATTGGCCTTGCAATCAGCATGAAACCTGCCGACAAAAACCATAACTACGGGCATTAC CGTTCTGAATATATCGGTTCATTGATTGCATCGTTTATTATGTTTGCTGTGAGTGTACAAGTTATATTACAAGGAATTAA AAATTATATCCGTCAGGAATATTCAAATCCTTCCATTGAGACTGCAGTTGTAGCACTACTATCATCGTTTGCGATGCTCG CCGTATACATTTATAATCGTAATCTTGCGAAGAAACTGGATTCCAGTGCACTCAAAGCAGCAGCAGCAGATAATTTATCA GATGCACTCGTATCGCTTGGCGCATTTATAGGAATCGTCGGTGTATTCTTCGGATTGACATTTTTAGATACGGTTGCCGC AATTATTGTCGGCTTACTCATAATGAAGACCGCTATCGAGATATTCTTTGAAACAGCAATTACGTTAACGGATGGATTCG ATGCAGATACACTGGACCATATGAAACGTATCGTGTTGTCAGTAGAAAATGTAGAAAGCTGTGTTGATATTAAAGGAAGA AACCACGGAGTTATGACATTTGTAGATGTGACTGTTACAGTAAACCCTAGTTTCACTGTTGCTGAGAGCCACGATATAAC AGAACACATTGAATATGCGATTAAAGAAGAATATGGCGCTGTTGAAACAATCGTTCACCTTGAACCCGGAATAAAAAAAT AA
Upstream 100 bases:
>100_bases AAATAAGGGTTACCTAATTTTCTAAAAAGTCGCACTTCGCTGCCATCACTATACATTTACCGACCTTTGATTAATAATAG AGATAATCATTATTTAAAGG
Downstream 100 bases:
>100_bases AAAATTGCACACCCTTATATTAGGGTGTGCAATTTTGTTAGAGATTAGCGCTTTTACCACTTGCAATGTTTAACAAACTA GAGCGAATAACTGCTCCTTA
Product: cation efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNKMQVKDQLQQAQKGAKVSIIMYVLLTTFKLLFGYIHGSQALVADGLNNATDVVSSVALLIGLAISMKPADKNHNYGHY RSEYIGSLIASFIMFAVSVQVILQGIKNYIRQEYSNPSIETAVVALLSSFAMLAVYIYNRNLAKKLDSSALKAAAADNLS DALVSLGAFIGIVGVFFGLTFLDTVAAIIVGLLIMKTAIEIFFETAITLTDGFDADTLDHMKRIVLSVENVESCVDIKGR NHGVMTFVDVTVTVNPSFTVAESHDITEHIEYAIKEEYGAVETIVHLEPGIKK
Sequences:
>Translated_293_residues MNKMQVKDQLQQAQKGAKVSIIMYVLLTTFKLLFGYIHGSQALVADGLNNATDVVSSVALLIGLAISMKPADKNHNYGHY RSEYIGSLIASFIMFAVSVQVILQGIKNYIRQEYSNPSIETAVVALLSSFAMLAVYIYNRNLAKKLDSSALKAAAADNLS DALVSLGAFIGIVGVFFGLTFLDTVAAIIVGLLIMKTAIEIFFETAITLTDGFDADTLDHMKRIVLSVENVESCVDIKGR NHGVMTFVDVTVTVNPSFTVAESHDITEHIEYAIKEEYGAVETIVHLEPGIKK >Mature_293_residues MNKMQVKDQLQQAQKGAKVSIIMYVLLTTFKLLFGYIHGSQALVADGLNNATDVVSSVALLIGLAISMKPADKNHNYGHY RSEYIGSLIASFIMFAVSVQVILQGIKNYIRQEYSNPSIETAVVALLSSFAMLAVYIYNRNLAKKLDSSALKAAAADNLS DALVSLGAFIGIVGVFFGLTFLDTVAAIIVGLLIMKTAIEIFFETAITLTDGFDADTLDHMKRIVLSVENVESCVDIKGR NHGVMTFVDVTVTVNPSFTVAESHDITEHIEYAIKEEYGAVETIVHLEPGIKK
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=269, Percent_Identity=23.0483271375465, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 31904; Mature: 31904
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMQVKDQLQQAQKGAKVSIIMYVLLTTFKLLFGYIHGSQALVADGLNNATDVVSSVAL CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHH LIGLAISMKPADKNHNYGHYRSEYIGSLIASFIMFAVSVQVILQGIKNYIRQEYSNPSIE HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TAVVALLSSFAMLAVYIYNRNLAKKLDSSALKAAAADNLSDALVSLGAFIGIVGVFFGLT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FLDTVAAIIVGLLIMKTAIEIFFETAITLTDGFDADTLDHMKRIVLSVENVESCVDIKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC NHGVMTFVDVTVTVNPSFTVAESHDITEHIEYAIKEEYGAVETIVHLEPGIKK CCCEEEEEEEEEEECCCEEECCCCCHHHHHHHHHHHHCCHHHHHEECCCCCCC >Mature Secondary Structure MNKMQVKDQLQQAQKGAKVSIIMYVLLTTFKLLFGYIHGSQALVADGLNNATDVVSSVAL CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHH LIGLAISMKPADKNHNYGHYRSEYIGSLIASFIMFAVSVQVILQGIKNYIRQEYSNPSIE HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH TAVVALLSSFAMLAVYIYNRNLAKKLDSSALKAAAADNLSDALVSLGAFIGIVGVFFGLT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FLDTVAAIIVGLLIMKTAIEIFFETAITLTDGFDADTLDHMKRIVLSVENVESCVDIKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC NHGVMTFVDVTVTVNPSFTVAESHDITEHIEYAIKEEYGAVETIVHLEPGIKK CCCEEEEEEEEEEECCCEEECCCCCHHHHHHHHHHHHCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 8951816 [H]