| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is acuC [H]
Identifier: 222151659
GI number: 222151659
Start: 1531292
End: 1532428
Strand: Direct
Name: acuC [H]
Synonym: MCCL_1412
Alternate gene names: 222151659
Gene position: 1531292-1532428 (Clockwise)
Preceding gene: 222151658
Following gene: 222151681
Centisome position: 72.84
GC content: 39.75
Gene sequence:
>1137_bases ATGACAAAATTTGTCTACTCAAAAAAACTGCTGAAATATCGCTTTGGTGATGATCATCCTTTTAATCAGATGCGCCTGTT ACTTACGAAATCATTACTTGAAAGCTTATCACTGCTGCATGAAGAAGATATCGTTGCACCCCGCACTGCAACAGATGAAG AACTGATGCTTGTTCACCAGAAAGAATATATTGAAGCGGTAAAAAAAGCAGGTCAAGGAGAACTGAGTACCAGTGATTGC AACAAGTTCGGACTTAATTCAAACGATACACCAAACTTTGAAAATATGCATGAAATGAGTGCATTGCTTGTTGGCGCAAC GCTTACTGCATGCGACATTGTTATGAATGATATCGACCATACTGCATGCAACTTTGGTGGCGGACTACATCACGGCTTCA CTGGACGTGCTTCAGGATTTTGTATCTATAATGATTCTGCAGTCGCAATAGAATATATGAAACGTAAATATAAACAACGC GTACTGTATATTGATACCGACGCACATCATGGTGATGGTGTACAGTTTGCTTTCTATAATGATAATCAGATAATGACCTA TTCTATTCATGAGACTGGCCGATACCTGTTCCCTGGAACCGGCGCCATTACTGAAAAGGGTGAAGGTGAAGGTTATTTAT ATAGTATGAATATACCTGTTGATGCTTATACTGAAGATGATTCATTTCTGGAATGCTTTGAAGAAAGTTTACGCGCAGCA TGTGAATTCTTTAAACCAGATATTATATTAAGTCAAAATGGTGCTGATGCCCATTATCTTGATCCATTGACACATCTCTC TTGTACACATAGGACATACCAACACATCCCACAAATCGTCCTTCGATTAGCAAATGAATATACAAATGGTAGGTGGATTG CTGTCGGAGGTGGTGGTTATAATATCTTTCAAGTCGCGCCACTCGCCTGGGCACAAGTATATAATGCGATGCTCGGACAC AGCTATTTAGAAGGTTCAATACCAACTGACTGGATTACGATGTGGCAAAGTAAAGCACAAGTAAAGATTCCAAAAACATG GAATGAAGATCTACAAGGGTACTCAGTCATACCTAGAAGACGCGATATCGAAGAAAAAAATAAAATGATGCTGGCGCGTG TCGTGCAGCATTACTAG
Upstream 100 bases:
>100_bases AAATCGTAACTTTGCGCATGATTGCGATGAACCCAAATATTGCTATATTTGATCTGGAGAAGAAAGGATTCACAGTACTT GACCCTTTCGAAAGTGGCCT
Downstream 100 bases:
>100_bases GTGGCTCGTGTTTTTATTTTACGAGCCACCTTACCAACCCATAAAAAGGACCTCGCATACGCAAGGCCCTTAATTTCTAT TTCGTCGTTCCACGATATTC
Product: acetoin utilization protein AcuC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTKFVYSKKLLKYRFGDDHPFNQMRLLLTKSLLESLSLLHEEDIVAPRTATDEELMLVHQKEYIEAVKKAGQGELSTSDC NKFGLNSNDTPNFENMHEMSALLVGATLTACDIVMNDIDHTACNFGGGLHHGFTGRASGFCIYNDSAVAIEYMKRKYKQR VLYIDTDAHHGDGVQFAFYNDNQIMTYSIHETGRYLFPGTGAITEKGEGEGYLYSMNIPVDAYTEDDSFLECFEESLRAA CEFFKPDIILSQNGADAHYLDPLTHLSCTHRTYQHIPQIVLRLANEYTNGRWIAVGGGGYNIFQVAPLAWAQVYNAMLGH SYLEGSIPTDWITMWQSKAQVKIPKTWNEDLQGYSVIPRRRDIEEKNKMMLARVVQHY
Sequences:
>Translated_378_residues MTKFVYSKKLLKYRFGDDHPFNQMRLLLTKSLLESLSLLHEEDIVAPRTATDEELMLVHQKEYIEAVKKAGQGELSTSDC NKFGLNSNDTPNFENMHEMSALLVGATLTACDIVMNDIDHTACNFGGGLHHGFTGRASGFCIYNDSAVAIEYMKRKYKQR VLYIDTDAHHGDGVQFAFYNDNQIMTYSIHETGRYLFPGTGAITEKGEGEGYLYSMNIPVDAYTEDDSFLECFEESLRAA CEFFKPDIILSQNGADAHYLDPLTHLSCTHRTYQHIPQIVLRLANEYTNGRWIAVGGGGYNIFQVAPLAWAQVYNAMLGH SYLEGSIPTDWITMWQSKAQVKIPKTWNEDLQGYSVIPRRRDIEEKNKMMLARVVQHY >Mature_377_residues TKFVYSKKLLKYRFGDDHPFNQMRLLLTKSLLESLSLLHEEDIVAPRTATDEELMLVHQKEYIEAVKKAGQGELSTSDCN KFGLNSNDTPNFENMHEMSALLVGATLTACDIVMNDIDHTACNFGGGLHHGFTGRASGFCIYNDSAVAIEYMKRKYKQRV LYIDTDAHHGDGVQFAFYNDNQIMTYSIHETGRYLFPGTGAITEKGEGEGYLYSMNIPVDAYTEDDSFLECFEESLRAAC EFFKPDIILSQNGADAHYLDPLTHLSCTHRTYQHIPQIVLRLANEYTNGRWIAVGGGGYNIFQVAPLAWAQVYNAMLGHS YLEGSIPTDWITMWQSKAQVKIPKTWNEDLQGYSVIPRRRDIEEKNKMMLARVVQHY
Specific function: Role in growth and sporulation on acetoin or butanediol. Involved in the breakdown of these compounds used as a carbon source [H]
COG id: COG0123
COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histone deacetylase family [H]
Homologues:
Organism=Homo sapiens, GI8923769, Length=307, Percent_Identity=32.8990228013029, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI13128862, Length=305, Percent_Identity=33.1147540983607, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI13128860, Length=305, Percent_Identity=32.7868852459016, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI293336691, Length=279, Percent_Identity=33.3333333333333, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI262073092, Length=223, Percent_Identity=34.5291479820628, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI262073088, Length=203, Percent_Identity=33.9901477832512, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI30795204, Length=351, Percent_Identity=26.7806267806268, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI17158039, Length=351, Percent_Identity=26.7806267806268, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI30795202, Length=351, Percent_Identity=26.7806267806268, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI13128864, Length=318, Percent_Identity=29.2452830188679, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI20070354, Length=323, Percent_Identity=28.4829721362229, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI62750349, Length=336, Percent_Identity=28.2738095238095, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI62750347, Length=336, Percent_Identity=28.2738095238095, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI153085395, Length=349, Percent_Identity=25.5014326647564, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI217272877, Length=295, Percent_Identity=26.4406779661017, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI209862883, Length=292, Percent_Identity=25, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI148539870, Length=351, Percent_Identity=25.0712250712251, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI169234807, Length=351, Percent_Identity=25.0712250712251, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI226529806, Length=325, Percent_Identity=27.3846153846154, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17508561, Length=310, Percent_Identity=32.9032258064516, Blast_Score=157, Evalue=7e-39, Organism=Caenorhabditis elegans, GI17561978, Length=304, Percent_Identity=33.2236842105263, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17534739, Length=319, Percent_Identity=30.4075235109718, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17540334, Length=311, Percent_Identity=30.8681672025724, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193206283, Length=311, Percent_Identity=30.8681672025724, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17540332, Length=311, Percent_Identity=30.8681672025724, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI193209491, Length=299, Percent_Identity=26.4214046822742, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25154020, Length=310, Percent_Identity=22.258064516129, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25154022, Length=313, Percent_Identity=22.6837060702875, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6321244, Length=328, Percent_Identity=32.9268292682927, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6323999, Length=305, Percent_Identity=30.4918032786885, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6324307, Length=333, Percent_Identity=28.5285285285285, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325325, Length=214, Percent_Identity=30.8411214953271, Blast_Score=109, Evalue=9e-25, Organism=Drosophila melanogaster, GI24644244, Length=313, Percent_Identity=32.5878594249201, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24657891, Length=305, Percent_Identity=33.4426229508197, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24641720, Length=345, Percent_Identity=26.9565217391304, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI281360801, Length=345, Percent_Identity=26.9565217391304, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI281360799, Length=345, Percent_Identity=26.9565217391304, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24642142, Length=312, Percent_Identity=26.6025641025641, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24642144, Length=312, Percent_Identity=26.6025641025641, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24642146, Length=312, Percent_Identity=26.6025641025641, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI281360899, Length=312, Percent_Identity=26.6025641025641, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003085 - InterPro: IPR000286 [H]
Pfam domain/function: PF00850 Hist_deacetyl [H]
EC number: NA
Molecular weight: Translated: 42966; Mature: 42835
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVYSKKLLKYRFGDDHPFNQMRLLLTKSLLESLSLLHEEDIVAPRTATDEELMLVHQ CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KEYIEAVKKAGQGELSTSDCNKFGLNSNDTPNFENMHEMSALLVGATLTACDIVMNDIDH HHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH TACNFGGGLHHGFTGRASGFCIYNDSAVAIEYMKRKYKQRVLYIDTDAHHGDGVQFAFYN HHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEEC DNQIMTYSIHETGRYLFPGTGAITEKGEGEGYLYSMNIPVDAYTEDDSFLECFEESLRAA CCEEEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHH CEFFKPDIILSQNGADAHYLDPLTHLSCTHRTYQHIPQIVLRLANEYTNGRWIAVGGGGY HHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC NIFQVAPLAWAQVYNAMLGHSYLEGSIPTDWITMWQSKAQVKIPKTWNEDLQGYSVIPRR EEEEEHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCEECCCC RDIEEKNKMMLARVVQHY CCHHHHHHHHHHHHHHCC >Mature Secondary Structure TKFVYSKKLLKYRFGDDHPFNQMRLLLTKSLLESLSLLHEEDIVAPRTATDEELMLVHQ CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KEYIEAVKKAGQGELSTSDCNKFGLNSNDTPNFENMHEMSALLVGATLTACDIVMNDIDH HHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH TACNFGGGLHHGFTGRASGFCIYNDSAVAIEYMKRKYKQRVLYIDTDAHHGDGVQFAFYN HHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEEC DNQIMTYSIHETGRYLFPGTGAITEKGEGEGYLYSMNIPVDAYTEDDSFLECFEESLRAA CCEEEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHH CEFFKPDIILSQNGADAHYLDPLTHLSCTHRTYQHIPQIVLRLANEYTNGRWIAVGGGGY HHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC NIFQVAPLAWAQVYNAMLGHSYLEGSIPTDWITMWQSKAQVKIPKTWNEDLQGYSVIPRR EEEEEHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCEECCCC RDIEEKNKMMLARVVQHY CCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934817; 9387221; 9384377 [H]