| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ytfP [H]
Identifier: 222151681
GI number: 222151681
Start: 1554025
End: 1555269
Strand: Direct
Name: ytfP [H]
Synonym: MCCL_1434
Alternate gene names: 222151681
Gene position: 1554025-1555269 (Clockwise)
Preceding gene: 222151659
Following gene: 222151684
Centisome position: 73.92
GC content: 43.21
Gene sequence:
>1245_bases ATGTTTAATACTATAGTTATCGGAGGCGGACCAAGTGGCCTGATGGCTGCGATCAGTGCATCAGAAAATGGGAAATCCGT TCTCTTGATCGATAAGAAGGATAAGTTAGGACGCAAACTCCAGATTTCTGGTGGAGGACGCTGTAATGTCACGAATCGTG TCTCTCACGAAGAATTGATACAACACCTACCAGGAAACGGAAAGTTTCTCTACAGTGCATTTAATACATTTGATAACTTC GCCATTATCGATTACTTTGAGAACCTCGGCGTCCGCTTAAAAGAAGAAGATCACGGCCGCATGTTCCCAGTGACTGATAA TGCGAAGGACGTAGTTAACGCACTGAAACAACAGCTCGTCAAAAACAACGTCGATATCCGCACGAATCAGAAGGTCGCAT CCCTTCTCGTGCAGGACACAGTCAAAGGGGTCAGACTGGAAGACGCCACTGAAATCTATGCTGACAATGTTATTATTGCA ACAGGAGGAAAAAGCGTACCTCATACCGGGTCAACAGGAGACGGATATGAATTTGCGAAACAGGCAGGACATACCATCAC AGAACTCTTTCCTACTGAAGTACCCATAACTTCGAATGCGCCATTCATTAAAGCAAAGACGTTGCAAGGATTAAGCTTGC GTGATGTTGCACTCAGTGTCCTGCGTAAGAACGGCAAACCCCGTATCACACACCAGATGGACATGATATTTACACATTTC GGTATCTCTGGCCCTGCAGCATTACGCTGCTCACAGTTTGTATATAAAGAACAAAAGAGCCAGAAGAAACAGGACATTAC AATGATGATCGACTGCTTTCCACAAGAAAGTATCGGCGCACTGAAAAACAGAATCACAAAAATGATCGACACGAATAAAG ACAAAGCCATTAAAAACAGTTTAAAAGGACTCGTATCTGAACGCTACTTATTATTCTTACTGGAACAAGCTGGACTGAAC CTGGAAGATAACGGCCATCACTTAAAGAAAGAAGCGGTAGAACAGTTTTGCGAGCTGCTGAAAGGATTCAAATTCACAGT AAACGGTACCCAATCGATAGAAAAAGCATTCGTCACGGGTGGCGGCGTATCTGTGAAAGAAATTGTACCTGCAACGATGC AATCGAAGCTGCATGATAATCTATATTTTTGTGGTGAAGTATTAGATATTCATGGATATACAGGCGGTTATAACATTACC AGCGCTCTCGTTACCGGATACATCGCAGGATTAAATTGCAGATAA
Upstream 100 bases:
>100_bases GAATGTTTATTATCATAACACCATTCAAAAATATTAACTACTGAATTCATATATTTTACCATAAAATAAATGTATAATAT TTTAAAATAGGAGGTCAAAT
Downstream 100 bases:
>100_bases GGTTGTCACATGTGCGTTTAGTCACGAGTAAAATTACGAAAAGATGCCTAAGAAACGCTCTTTGTTTCTGGCATCTTTTT GATTTTATCGAAGTGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELIQHLPGNGKFLYSAFNTFDNF AIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLVKNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIA TGGKSVPHTGSTGDGYEFAKQAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNSLKGLVSERYLLFLLEQAGLN LEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTGGGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNIT SALVTGYIAGLNCR
Sequences:
>Translated_414_residues MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELIQHLPGNGKFLYSAFNTFDNF AIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLVKNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIA TGGKSVPHTGSTGDGYEFAKQAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNSLKGLVSERYLLFLLEQAGLN LEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTGGGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNIT SALVTGYIAGLNCR >Mature_414_residues MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELIQHLPGNGKFLYSAFNTFDNF AIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLVKNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIA TGGKSVPHTGSTGDGYEFAKQAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNSLKGLVSERYLLFLLEQAGLN LEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTGGGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNIT SALVTGYIAGLNCR
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367234, Length=389, Percent_Identity=29.8200514138817, Blast_Score=155, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 45435; Mature: 45435
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELI CCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHH QHLPGNGKFLYSAFNTFDNFAIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLV HHCCCCCEEEEEEHHCCCCEEHEEEHHHCCCEEEECCCCCEEECCCCHHHHHHHHHHHHH KNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIATGGKSVPHTGSTGDGYEFAK HCCCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH QAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF HCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNS CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHH LKGLVSERYLLFLLEQAGLNLEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTG HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCC GGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNITSALVTGYIAGLNCR CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELI CCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHH QHLPGNGKFLYSAFNTFDNFAIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLV HHCCCCCEEEEEEHHCCCCEEHEEEHHHCCCEEEECCCCCEEECCCCHHHHHHHHHHHHH KNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIATGGKSVPHTGSTGDGYEFAK HCCCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH QAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF HCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNS CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHH LKGLVSERYLLFLLEQAGLNLEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTG HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCC GGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNITSALVTGYIAGLNCR CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]