| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151647
Identifier: 222151647
GI number: 222151647
Start: 1515503
End: 1515922
Strand: Direct
Name: 222151647
Synonym: MCCL_1400
Alternate gene names: NA
Gene position: 1515503-1515922 (Clockwise)
Preceding gene: 222151643
Following gene: 222151650
Centisome position: 72.09
GC content: 28.33
Gene sequence:
>420_bases TTGTACATAGAAATAAAAAATATTAAAAGAAATGAGGAAAAAGAAATGAAAAACAATCAAATATCTTTAAGATTTAACGA AGAAGAGTTTAAGGCATTACAAAAAAAAGCTTTAGCAGACGGGAGAACAGCTTCAGCATACGCTAAAGAAGTTATTTTAA ATAACTTAGGTATTGTTAGTACTGAAAAAGACTTAACTTTAAACGAAGTTCATGAGAAAGCCCAAAAATTTGATTCTAAA AAAGCGTTTGCAATTCGTGATTTATTTACTGATGATGAATGGGGATCATTTTCTAAAGCTTCACGTTTATCAGTTGGAAG ACTATTCTTTAATAGCACTAAAGAGAATGGACAGTATCACGATTATTACAGATTTGTTGATAAAAAAAGCTCTAACTTAG CTTATTATGTTAAATTATAG
Upstream 100 bases:
>100_bases CAATAAAATTTTGACATGTAACACAATTAGAATTGTGTTGCATTATTTGCTTTCAAATATTTGAAAGCAAATATTTACTT TCAAACAATAAGATGCTATA
Downstream 100 bases:
>100_bases GAGTGATAATATCCAAACTTTAAAATATCTATAAAATATGATAAAATGCGTTTAACGAAAATAGTTAGTGTGTTAAACAC AAACCCCCGATACTACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MYIEIKNIKRNEEKEMKNNQISLRFNEEEFKALQKKALADGRTASAYAKEVILNNLGIVSTEKDLTLNEVHEKAQKFDSK KAFAIRDLFTDDEWGSFSKASRLSVGRLFFNSTKENGQYHDYYRFVDKKSSNLAYYVKL
Sequences:
>Translated_139_residues MYIEIKNIKRNEEKEMKNNQISLRFNEEEFKALQKKALADGRTASAYAKEVILNNLGIVSTEKDLTLNEVHEKAQKFDSK KAFAIRDLFTDDEWGSFSKASRLSVGRLFFNSTKENGQYHDYYRFVDKKSSNLAYYVKL >Mature_139_residues MYIEIKNIKRNEEKEMKNNQISLRFNEEEFKALQKKALADGRTASAYAKEVILNNLGIVSTEKDLTLNEVHEKAQKFDSK KAFAIRDLFTDDEWGSFSKASRLSVGRLFFNSTKENGQYHDYYRFVDKKSSNLAYYVKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16250; Mature: 16250
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIEIKNIKRNEEKEMKNNQISLRFNEEEFKALQKKALADGRTASAYAKEVILNNLGIVS CEEEECCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEE TEKDLTLNEVHEKAQKFDSKKAFAIRDLFTDDEWGSFSKASRLSVGRLFFNSTKENGQYH CCCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCCCHH DYYRFVDKKSSNLAYYVKL HHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MYIEIKNIKRNEEKEMKNNQISLRFNEEEFKALQKKALADGRTASAYAKEVILNNLGIVS CEEEECCCCCCCHHHHCCCEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEE TEKDLTLNEVHEKAQKFDSKKAFAIRDLFTDDEWGSFSKASRLSVGRLFFNSTKENGQYH CCCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCCCHH DYYRFVDKKSSNLAYYVKL HHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA