| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ispG
Identifier: 222151449
GI number: 222151449
Start: 1306096
End: 1307211
Strand: Direct
Name: ispG
Synonym: MCCL_1202
Alternate gene names: 222151449
Gene position: 1306096-1307211 (Clockwise)
Preceding gene: 222151448
Following gene: 222151450
Centisome position: 62.13
GC content: 38.98
Gene sequence:
>1116_bases ATGCCTGAAATTACACATAGAAAAAATACACGACCGGTTAAAGTCGGCGATCTTACTATTGGGGGTTCAAACGAACTTGT AATCCAAAGTATGACAACAACGAAGACACATGATGTTGAAGCTACAGTTGCAGAGATCAAACGTCTTGAAGAAGCGGGAT GCCAGATTGTCCGTGTAGCCTGTCCTAAAGAAGAAGATGCACTTGCAATTGCAGAGATTAAAAAACAAATTAATATTCCA TTAGTCGTCGATATTCATTTCGACTATAAACTTGCATTACTCGCAATTGAAGGTGGTGCGGATAAAATCCGTATTAATCC GGGAAATATCGGTCGTCGTGAAAAAGTTGAAGAAGTTGTAAAAGCTTGTAAAGCGAAGGGCATTCCGATTCGTATCGGAG TAAACGCAGGTTCACTTGAGAAACATATATTAAAAAAATATGGTTATCCTACAGCAGATGGTATGGTGGAAAGTGCATTG CATCATATTAAAATATTAGAAGATCTGGATTTCCATGATATTATCGTTTCGATGAAAGCAAGTGATGTTAACTTAGCGAT TGAGGCCTATACAAAAGCTGCGCAAGCATTTGATTATCCACTACATTTAGGTATCACAGAGAGCGGGACATTATTTGCCG GGACAGTAAAATCAGCCGCAGGTCTCGGTGCAATTATGAGTTTAGGTATTGGTAACACGTTGCGTATTTCATTATCAGCA GATCCCGTAGAAGAAGTTAAAGTAGCGAGAGAACTATTGAAATCTTTCGGTCTGGCAAGTAACGCAGCAACGCTTATTTC ATGTCCGACTTGTGGTCGAATTGAAATCGACTTAATTTCAATTGCCAACGAAGTTGAAGAATATATTTCAACAATCAAAG CACCACTCAAAGTCGCAGTTTTAGGATGTGCTGTAAATGGTCCTGGTGAAGCACGTGAAGCAGATATCGGTATTGCTGGT GCGCGTGGTGAAGGTCTGTTATTTATGAAAGGTAAAACGGTAAGAAAAGTGCCCGAAGAGACAATGGTTGAAGAATTGAA GATGGAAATCGATAAACTTGCTGAAGAATACTTTAAAAAACAGGAAGCAGAAAAATTAGCAAATGCAGAAAAATAA
Upstream 100 bases:
>100_bases AAGCATAAAGCTAAACAAATTTGATTTCCAACTATATAATAGAAGTGTTATTCTAGTAAGGATAGTAATTAATAAGTTTA AATTATGAAGGAGAATTATA
Downstream 100 bases:
>100_bases AATAAGATTCGGTATTGATATCGATGGTACTGTTACTTGTCCGACAGCACTTGTGCCATACCTTCAGAAATCCTTTAATC CAGACTTTAAGTACGAAGAT
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPEITHRKNTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVACPKEEDALAIAEIKKQINIP LVVDIHFDYKLALLAIEGGADKIRINPGNIGRREKVEEVVKACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVESAL HHIKILEDLDFHDIIVSMKASDVNLAIEAYTKAAQAFDYPLHLGITESGTLFAGTVKSAAGLGAIMSLGIGNTLRISLSA DPVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTIKAPLKVAVLGCAVNGPGEAREADIGIAG ARGEGLLFMKGKTVRKVPEETMVEELKMEIDKLAEEYFKKQEAEKLANAEK
Sequences:
>Translated_371_residues MPEITHRKNTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVACPKEEDALAIAEIKKQINIP LVVDIHFDYKLALLAIEGGADKIRINPGNIGRREKVEEVVKACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVESAL HHIKILEDLDFHDIIVSMKASDVNLAIEAYTKAAQAFDYPLHLGITESGTLFAGTVKSAAGLGAIMSLGIGNTLRISLSA DPVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTIKAPLKVAVLGCAVNGPGEAREADIGIAG ARGEGLLFMKGKTVRKVPEETMVEELKMEIDKLAEEYFKKQEAEKLANAEK >Mature_370_residues PEITHRKNTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVACPKEEDALAIAEIKKQINIPL VVDIHFDYKLALLAIEGGADKIRINPGNIGRREKVEEVVKACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVESALH HIKILEDLDFHDIIVSMKASDVNLAIEAYTKAAQAFDYPLHLGITESGTLFAGTVKSAAGLGAIMSLGIGNTLRISLSAD PVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTIKAPLKVAVLGCAVNGPGEAREADIGIAGA RGEGLLFMKGKTVRKVPEETMVEELKMEIDKLAEEYFKKQEAEKLANAEK
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family
Homologues:
Organism=Escherichia coli, GI1788863, Length=347, Percent_Identity=48.9913544668588, Blast_Score=337, Evalue=1e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISPG_MACCJ (B9E6U1)
Other databases:
- EMBL: AP009484 - RefSeq: YP_002560605.1 - GeneID: 7389158 - GenomeReviews: AP009484_GR - KEGG: mcl:MCCL_1202 - OMA: APIVVQS - ProtClustDB: PRK00366 - HAMAP: MF_00159 - InterPro: IPR013785 - InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 - Gene3D: G3DSA:3.20.20.70 - PIRSF: PIRSF004640 - TIGRFAMs: TIGR00612
Pfam domain/function: PF04551 GcpE; SSF51717 DHP_synth_like
EC number: =1.17.7.1
Molecular weight: Translated: 40002; Mature: 39871
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEITHRKNTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVA CCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE CPKEEDALAIAEIKKQINIPLVVDIHFDYKLALLAIEGGADKIRINPGNIGRREKVEEVV CCCCCCCHHHHHHHHHCCCCEEEEEECCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHH KACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKA HHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEC SDVNLAIEAYTKAAQAFDYPLHLGITESGTLFAGTVKSAAGLGAIMSLGIGNTLRISLSA CCCEEEHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEECC DPVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTIKAPLKVAV CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEE LGCAVNGPGEAREADIGIAGARGEGLLFMKGKTVRKVPEETMVEELKMEIDKLAEEYFKK EEEEECCCCCCCCCCCEEECCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH QEAEKLANAEK HHHHHHHCCCC >Mature Secondary Structure PEITHRKNTRPVKVGDLTIGGSNELVIQSMTTTKTHDVEATVAEIKRLEEAGCQIVRVA CCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE CPKEEDALAIAEIKKQINIPLVVDIHFDYKLALLAIEGGADKIRINPGNIGRREKVEEVV CCCCCCCHHHHHHHHHCCCCEEEEEECCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHH KACKAKGIPIRIGVNAGSLEKHILKKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKA HHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEC SDVNLAIEAYTKAAQAFDYPLHLGITESGTLFAGTVKSAAGLGAIMSLGIGNTLRISLSA CCCEEEHHHHHHHHHHCCCCEEEEECCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEECC DPVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTIKAPLKVAV CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEE LGCAVNGPGEAREADIGIAGARGEGLLFMKGKTVRKVPEETMVEELKMEIDKLAEEYFKK EEEEECCCCCCCCCCCEEECCCCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH QEAEKLANAEK HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA