Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is 222151450

Identifier: 222151450

GI number: 222151450

Start: 1307198

End: 1307776

Strand: Direct

Name: 222151450

Synonym: MCCL_1203

Alternate gene names: NA

Gene position: 1307198-1307776 (Clockwise)

Preceding gene: 222151449

Following gene: 222151456

Centisome position: 62.18

GC content: 37.13

Gene sequence:

>579_bases
ATGCAGAAAAATAAAATAAGATTCGGTATTGATATCGATGGTACTGTTACTTGTCCGACAGCACTTGTGCCATACCTTCA
GAAATCCTTTAATCCAGACTTTAAGTACGAAGATATTACTGCATACGAACTAACAACTGTATTAGGTATTAGCAATGATG
AAGTTGCACAGTGGTTCGAAGAAAATGAACGTGCTTTATATAAAGATTCGCCTGTGCATAAAGATGCGGACTTAATATTA
AGACAATGGTCAGAAGAATTTGAGCTGTTCTTCATCAGTGCAAGACACACCTTACTTACTGATATTACTTATGACTGGTT
CGATAGACATAATATCCCCTATCACCATATCGAACTTACAGGATCGCATAATAAAGTTGAGACGGCGCGCAATCTAAAAG
TTGATGCTTTCTTTGAAGATAAACTTGATAATGCGCTTGATATTCAACAGGCGCTTGATATTCCGGTCTACCTGTTCGAT
ACACCATACAATCAGGCAGAGTTACCTGAAGATGTGTTTCGTGTGCACTCCTGGATTGAAACGAATCGACTTATTCAACA
ACATTTTAATACAAAATAA

Upstream 100 bases:

>100_bases
AGAAAAGTGCCCGAAGAGACAATGGTTGAAGAATTGAAGATGGAAATCGATAAACTTGCTGAAGAATACTTTAAAAAACA
GGAAGCAGAAAAATTAGCAA

Downstream 100 bases:

>100_bases
AAAAGATGCCGAGGCATCTTTTTTATTTGCATTTTTCACATAATCCATAGAGTTCAATTTTATGACTTTCTATTTCAACA
TCTGGAAGTTCATCCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MQKNKIRFGIDIDGTVTCPTALVPYLQKSFNPDFKYEDITAYELTTVLGISNDEVAQWFEENERALYKDSPVHKDADLIL
RQWSEEFELFFISARHTLLTDITYDWFDRHNIPYHHIELTGSHNKVETARNLKVDAFFEDKLDNALDIQQALDIPVYLFD
TPYNQAELPEDVFRVHSWIETNRLIQQHFNTK

Sequences:

>Translated_192_residues
MQKNKIRFGIDIDGTVTCPTALVPYLQKSFNPDFKYEDITAYELTTVLGISNDEVAQWFEENERALYKDSPVHKDADLIL
RQWSEEFELFFISARHTLLTDITYDWFDRHNIPYHHIELTGSHNKVETARNLKVDAFFEDKLDNALDIQQALDIPVYLFD
TPYNQAELPEDVFRVHSWIETNRLIQQHFNTK
>Mature_192_residues
MQKNKIRFGIDIDGTVTCPTALVPYLQKSFNPDFKYEDITAYELTTVLGISNDEVAQWFEENERALYKDSPVHKDADLIL
RQWSEEFELFFISARHTLLTDITYDWFDRHNIPYHHIELTGSHNKVETARNLKVDAFFEDKLDNALDIQQALDIPVYLFD
TPYNQAELPEDVFRVHSWIETNRLIQQHFNTK

Specific function: Unknown

COG id: COG5663

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'(3')-deoxyribonucleotidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR009206 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22686; Mature: 22686

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNKIRFGIDIDGTVTCPTALVPYLQKSFNPDFKYEDITAYELTTVLGISNDEVAQWFE
CCCCCEEEEEECCCCEECHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCHHHHHHHH
ENERALYKDSPVHKDADLILRQWSEEFELFFISARHTLLTDITYDWFDRHNIPYHHIELT
HCCCEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHCCHHHHHCCCCCEEEEEEE
GSHNKVETARNLKVDAFFEDKLDNALDIQQALDIPVYLFDTPYNQAELPEDVFRVHSWIE
CCCCCHHHHHCCEEEEEEHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
TNRLIQQHFNTK
HHHHHHHHCCCC
>Mature Secondary Structure
MQKNKIRFGIDIDGTVTCPTALVPYLQKSFNPDFKYEDITAYELTTVLGISNDEVAQWFE
CCCCCEEEEEECCCCEECHHHHHHHHHHHCCCCCCCCCCHHEEEEEEEECCCHHHHHHHH
ENERALYKDSPVHKDADLILRQWSEEFELFFISARHTLLTDITYDWFDRHNIPYHHIELT
HCCCEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHCCHHHHHCCCCCEEEEEEE
GSHNKVETARNLKVDAFFEDKLDNALDIQQALDIPVYLFDTPYNQAELPEDVFRVHSWIE
CCCCCHHHHHCCEEEEEEHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
TNRLIQQHFNTK
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]