| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is yqhL [H]
Identifier: 222151425
GI number: 222151425
Start: 1284097
End: 1284477
Strand: Direct
Name: yqhL [H]
Synonym: MCCL_1178
Alternate gene names: 222151425
Gene position: 1284097-1284477 (Clockwise)
Preceding gene: 222151423
Following gene: 222151436
Centisome position: 61.08
GC content: 35.43
Gene sequence:
>381_bases ATGAATTTCTGGTATGTGTTAGGTATTGTTCTTCTCTTACTATTCATCTATATACTTGTTAATTACTTTATTAATCGTAA AGCTGTTACTGAGTTAAGTCAAGATGAGTTTCAACAAGGGTTAAGAAGAGCACAAGTAATCGATTTACGTGAAAAAGCTG ACTATGATTATGGTCATATCATCGGCTCAAGAAATATTCCGATGTCAATATTTAGAACACGTATGCTAGGTTTACGTAAA GATCAGCCCATCTACTTCGTCGATGCGAACGGTATTTCAAGCTATCGTGCTGCACGCATGATGAAAAAGCATGGTTACAC AGACCTTTATATGCTTAAAAACGGCTATAAAGGCTGGACTGGCAAAATCAAATCAAAATAA
Upstream 100 bases:
>100_bases AACCCTCTTTACTGTATGTCTATAGTTTTAAAAAATACTTTGAAAATAAAGTATATTATATCTATAATATATCTATGAAA CAAAAAGGAGGAATACCTGT
Downstream 100 bases:
>100_bases AACAAGGTTAAGACATGCGTCTTAACCTTGTTTTTGTACTACTTCTCGTTTGAACCTTCATACTTTAAAACTGGCTTACG TGCCGCCAATGTTTCATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MNFWYVLGIVLLLLFIYILVNYFINRKAVTELSQDEFQQGLRRAQVIDLREKADYDYGHIIGSRNIPMSIFRTRMLGLRK DQPIYFVDANGISSYRAARMMKKHGYTDLYMLKNGYKGWTGKIKSK
Sequences:
>Translated_126_residues MNFWYVLGIVLLLLFIYILVNYFINRKAVTELSQDEFQQGLRRAQVIDLREKADYDYGHIIGSRNIPMSIFRTRMLGLRK DQPIYFVDANGISSYRAARMMKKHGYTDLYMLKNGYKGWTGKIKSK >Mature_126_residues MNFWYVLGIVLLLLFIYILVNYFINRKAVTELSQDEFQQGLRRAQVIDLREKADYDYGHIIGSRNIPMSIFRTRMLGLRK DQPIYFVDANGISSYRAARMMKKHGYTDLYMLKNGYKGWTGKIKSK
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Escherichia coli, GI1790040, Length=129, Percent_Identity=31.0077519379845, Blast_Score=67, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 14871; Mature: 14871
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFWYVLGIVLLLLFIYILVNYFINRKAVTELSQDEFQQGLRRAQVIDLREKADYDYGHI CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHE IGSRNIPMSIFRTRMLGLRKDQPIYFVDANGISSYRAARMMKKHGYTDLYMLKNGYKGWT ECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC GKIKSK CCCCCC >Mature Secondary Structure MNFWYVLGIVLLLLFIYILVNYFINRKAVTELSQDEFQQGLRRAQVIDLREKADYDYGHI CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHE IGSRNIPMSIFRTRMLGLRKDQPIYFVDANGISSYRAARMMKKHGYTDLYMLKNGYKGWT ECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCC GKIKSK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]