Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is 222151423

Identifier: 222151423

GI number: 222151423

Start: 1282431

End: 1283147

Strand: Direct

Name: 222151423

Synonym: MCCL_1175

Alternate gene names: NA

Gene position: 1282431-1283147 (Clockwise)

Preceding gene: 222151403

Following gene: 222151425

Centisome position: 61.0

GC content: 31.1

Gene sequence:

>717_bases
ATGTCTGACTTTTTCTATTTTCATGTTTTTCTCCTTTGTATATGTATTTTAACTATATTTTCTGAATATATACATGTTAA
CATAGTATTTAGAAAAACGAATCATTTGAGGAGTAAAAAAATGAAAAAATTCAAAATATTATCATTAATAATGACTTCTA
CTATAACACTTACTGCCTGTGGCGGAGGTGCTGAAACAGAACTAACAGAAAAATCGACCGACTTAAAGAAGGAAATTAAA
GTACTAAACTCTAAAATCGAAGATCAAAAAACCGATTTAATCACAAAACAAAACACTTTAAATGCTACTGACAATGAATT
AAAACAGCTACAAGGGAGCATGCAGATGTCTAATCATGAATTTACAACGCACTTTAATTCGTATGCTGCCTCACTTGCAA
TGGCTATAAAAATGTTTTCAACCATTGAAAACAAACTATCAAAACAAAATGATATTCAGATTAAAGAAAAACTAAGCACA
ATTAAATCTGACGTCAAAGACACAATCCAGCAATATAATCATGTATTTAAAAATAGCCAGCCACCTGCAACATTTGCTGA
TGTTCATCATCAGGTAAATGAAGCAAATCATAAATTCGAAAAGGCAGTCAGTTTGATTCATAGCGGCTACGAAAAATCTG
ACACAAAAAAAATATCGCAAGGCAAAGCGATGCTTCACGATGCGATAGATGCATTTGATAAATTAACAATTGAGTAG

Upstream 100 bases:

>100_bases
TGATGATCAACCCCGCACTACTACCTGTAAATCCAGATAAATATCTTCTGTTATGTGATGAAAGTACTACGACCGCGTCC
AACTGCTTTTCTTCTAATAA

Downstream 100 bases:

>100_bases
GTAAGCGCATGCGCTTACCTTCTTTTTAACCATTCTTCACTTCTATATTTTTCTATCAGTACAGAAACTTCCTGTTCAAT
CTCAGCAGTTACTTCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTACGGGAETELTEKSTDLKKEIK
VLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHEFTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLST
IKSDVKDTIQQYNHVFKNSQPPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE

Sequences:

>Translated_238_residues
MSDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTACGGGAETELTEKSTDLKKEIK
VLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHEFTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLST
IKSDVKDTIQQYNHVFKNSQPPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE
>Mature_237_residues
SDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTACGGGAETELTEKSTDLKKEIKV
LNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHEFTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLSTI
KSDVKDTIQQYNHVFKNSQPPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27159; Mature: 27027

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTAC
CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GGGAETELTEKSTDLKKEIKVLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCH
FTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLSTIKSDVKDTIQQYNHVFKNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTAC
CCHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GGGAETELTEKSTDLKKEIKVLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCH
FTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLSTIKSDVKDTIQQYNHVFKNSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA