Click here to switch to the map view.

The map label for this gene is dapD [H]

Identifier: 222151299

GI number: 222151299

Start: 1160644

End: 1161360

Strand: Direct

Name: dapD [H]

Synonym: MCCL_1052

Alternate gene names: 222151299

Gene position: 1160644-1161360 (Clockwise)

Preceding gene: 222151298

Following gene: 222151300

Centisome position: 55.21

GC content: 39.61

Gene sequence:

>717_bases
ATGCAGGAATTTACAGCACAGGAAATTATACAATACATTAGTAACTCAGAAAAAAAGACACCAATTAAAGTTTATCTAAA
TGGAAACTTTTCAGATGTAACTTTTCCGGAGAATATGAAAGTATTCGGATGTGAGACATCAAAAACACTCTTCACAGAAC
TGTCAGAGTGGGAAAAGTTCTATGAAAACAATGAAACACTTGTGACTGATTTTGAAATTGAATATGACAGAAGAAACTCA
GCAATTCCATTGATTGATCAGACAAAAGTTAATGCTAGAATTGAACCTGGAGCTTTCATCCGTGAACATGCAGTTATTCA
TGATAATGCAGTTATTATGATGGGTGCAACAATTAATATCGGTGCTGTCGTAGGCGAAGGAACAATGATCGATATGAATG
CCACACTTGGTGGTCGTGCAACAACTGGTAAGAATGTTCATGTAGGTGCAGGTGCAGTACTTGCTGGCGTAATTGAACCT
CCAAGTGCACAACCAGTGATCATAGAAGACGATGTACTTATCGGGGCAAATGCTGTTGTACTAGAAGGTGTATGTGTCGG
CAAAGGTGCAGTTGTAGCAGCTGGAGCGATCGTCACTGAAGATGTCCCTGCTGGTAGTGTTGTAGCTGGGACACCTGCTA
GAGTAATTAAGCAAGCTCATGAAGTAGAAGGCAGTAAGATTGAGATTGTACAGGCATTAAGACAGTTAAAGAAATAG

Upstream 100 bases:

>100_bases
AGATATATTCGCCAATGGAAGTATCGATGTTGCAGAGAAATTAATTCAGAAAGAAAAAGGCTATTACACATTTGAAAATT
TATAATAAAGGAGCATAATA

Downstream 100 bases:

>100_bases
CAGGAAGCTAATTGTGCTTGTCACAATTAGCTTTAAATTTTATGAGGTGAAACAATGGAATTAGATTATATTACACATAT
TAGACGCACATTGCATATGT

Product: tetrahydrodipicolinate acetyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MQEFTAQEIIQYISNSEKKTPIKVYLNGNFSDVTFPENMKVFGCETSKTLFTELSEWEKFYENNETLVTDFEIEYDRRNS
AIPLIDQTKVNARIEPGAFIREHAVIHDNAVIMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEP
PSAQPVIIEDDVLIGANAVVLEGVCVGKGAVVAAGAIVTEDVPAGSVVAGTPARVIKQAHEVEGSKIEIVQALRQLKK

Sequences:

>Translated_238_residues
MQEFTAQEIIQYISNSEKKTPIKVYLNGNFSDVTFPENMKVFGCETSKTLFTELSEWEKFYENNETLVTDFEIEYDRRNS
AIPLIDQTKVNARIEPGAFIREHAVIHDNAVIMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEP
PSAQPVIIEDDVLIGANAVVLEGVCVGKGAVVAAGAIVTEDVPAGSVVAGTPARVIKQAHEVEGSKIEIVQALRQLKK
>Mature_238_residues
MQEFTAQEIIQYISNSEKKTPIKVYLNGNFSDVTFPENMKVFGCETSKTLFTELSEWEKFYENNETLVTDFEIEYDRRNS
AIPLIDQTKVNARIEPGAFIREHAVIHDNAVIMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEP
PSAQPVIIEDDVLIGANAVVLEGVCVGKGAVVAAGAIVTEDVPAGSVVAGTPARVIKQAHEVEGSKIEIVQALRQLKK

Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate [H]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=131, Percent_Identity=41.9847328244275, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013710
- InterPro:   IPR018357
- InterPro:   IPR019873
- InterPro:   IPR011004 [H]

Pfam domain/function: PF08503 DapD_N [H]

EC number: =2.3.1.89 [H]

Molecular weight: Translated: 25481; Mature: 25481

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEFTAQEIIQYISNSEKKTPIKVYLNGNFSDVTFPENMKVFGCETSKTLFTELSEWEKF
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
YENNETLVTDFEIEYDRRNSAIPLIDQTKVNARIEPGAFIREHAVIHDNAVIMMGATINI
HCCCCEEEEEEEEEECCCCCCCCEEECCCCCEEECCCCHHHHCEEEECCEEEEEECEEEE
GAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSAQPVIIEDDVLIGANAVV
EEEECCCEEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEECCEEECCCEEE
LEGVCVGKGAVVAAGAIVTEDVPAGSVVAGTPARVIKQAHEVEGSKIEIVQALRQLKK
EEEEEECCCCEEEECEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQEFTAQEIIQYISNSEKKTPIKVYLNGNFSDVTFPENMKVFGCETSKTLFTELSEWEKF
CCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
YENNETLVTDFEIEYDRRNSAIPLIDQTKVNARIEPGAFIREHAVIHDNAVIMMGATINI
HCCCCEEEEEEEEEECCCCCCCCEEECCCCCEEECCCCHHHHCEEEECCEEEEEECEEEE
GAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSAQPVIIEDDVLIGANAVV
EEEECCCEEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCCCCEEEECCEEECCCEEE
LEGVCVGKGAVVAAGAIVTEDVPAGSVVAGTPARVIKQAHEVEGSKIEIVQALRQLKK
EEEEEECCCCEEEECEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA