| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is 222151277
Identifier: 222151277
GI number: 222151277
Start: 1136195
End: 1137295
Strand: Direct
Name: 222151277
Synonym: MCCL_1030
Alternate gene names: NA
Gene position: 1136195-1137295 (Clockwise)
Preceding gene: 222151276
Following gene: 222151278
Centisome position: 54.04
GC content: 32.88
Gene sequence:
>1101_bases ATGATGGAAGGTTTATTACTTAGTGGCGTATTATTTTTAACCGGCTTATTATTCTTATTGAATGGTCGTTTCGTTCGTCG TAATATAATATTTAGTGTCTTTGTGCCTGAGAGTGAAACAGATAATGGGGCAATTGCATCGGTAAAGGGGCAATACAGAA AACAAATTTTAATGTTAGCCATTGCTGTAGCACTATTATTTATAGTAATTTATTTATTTGCCAGTCATTCTGCAGCTTTA TTAAGCTTTGTTGTATTGCTGCACGTTTTAATTATCGGTGCAATTATTATCTATAAAAGTGCTCATGATCATTTGAAAGC CGTAAAGTTAATCGAAGAGTGGATGAAAGATATTAAAGTAGTTAAAGCCACAGATACACGTTTAATGACAGAAAGTACAC CACTTCCGAATGTTCTATATGTAATGCAGCTGATTGCATTTATTGCTGCATTTATATTTGTTGCATTAAATTATGATAAT ATACCCGAAACAATTGCTACCCATTGGAATTTTGAGGGTATTGCCGATGATTTTAGTCAAAAGAATTTCTTTAGCGTATT CTCTCCAGGCTTACTTGGATTAGCCATATTATTATCACTTTGGGCAAGTTCAAAGGGGACAAGATTTTTCAATACAACTG TTAATCCTGCTGTAAAAGATGCTTCTATCAATTTTATAAAAAATTCTAAGCTGATTAATAGTATGATGATTCATCTTATT TCATTTACGATGACCTTATTATTTATATTAATCTTTATTCGACCTGTAGTGTATAAAGACAATTATTTGCCGAATGGCAT CATGATGATGCTGATTGGAATGCTGCTTTTAATTACAGTAGCTTGTATCTATTTACAAATTTCGGAAGATAAGAAGTATC GTCAAGCCGTAGCTACTACAGACAAAGCACCATATTACAATGAGGACCATTATATCTTTGGACTATTCTACTATAATCCT GATGATTTGAATGTCTGGGTACCTAAGCTTTCAGAAATGGGGATGACATTAAATATGGCGCGACCGATGTCTTGGTTTAT ATCGTTTATTTTACTTGGATTGCCGATTGCTGTACTAATTGTAATTACAATTTTCTCATAA
Upstream 100 bases:
>100_bases AAGATTTAATAAGTCGTTTGAAACCGATTATTGATGAAGCAAAGTGCAAACAATTGGATGTAGCTGATTTACTGAAATTA ATTGAAAAGGGAGAGGGTTA
Downstream 100 bases:
>100_bases TGTTTTAATATGAAGCTAACTTCATTTTTTATTTATTCTATTTTCTATTATTATAAATATAATAATCAAATCATTAGGAG AGATGCTTATGATTTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MMEGLLLSGVLFLTGLLFLLNGRFVRRNIIFSVFVPESETDNGAIASVKGQYRKQILMLAIAVALLFIVIYLFASHSAAL LSFVVLLHVLIIGAIIIYKSAHDHLKAVKLIEEWMKDIKVVKATDTRLMTESTPLPNVLYVMQLIAFIAAFIFVALNYDN IPETIATHWNFEGIADDFSQKNFFSVFSPGLLGLAILLSLWASSKGTRFFNTTVNPAVKDASINFIKNSKLINSMMIHLI SFTMTLLFILIFIRPVVYKDNYLPNGIMMMLIGMLLLITVACIYLQISEDKKYRQAVATTDKAPYYNEDHYIFGLFYYNP DDLNVWVPKLSEMGMTLNMARPMSWFISFILLGLPIAVLIVITIFS
Sequences:
>Translated_366_residues MMEGLLLSGVLFLTGLLFLLNGRFVRRNIIFSVFVPESETDNGAIASVKGQYRKQILMLAIAVALLFIVIYLFASHSAAL LSFVVLLHVLIIGAIIIYKSAHDHLKAVKLIEEWMKDIKVVKATDTRLMTESTPLPNVLYVMQLIAFIAAFIFVALNYDN IPETIATHWNFEGIADDFSQKNFFSVFSPGLLGLAILLSLWASSKGTRFFNTTVNPAVKDASINFIKNSKLINSMMIHLI SFTMTLLFILIFIRPVVYKDNYLPNGIMMMLIGMLLLITVACIYLQISEDKKYRQAVATTDKAPYYNEDHYIFGLFYYNP DDLNVWVPKLSEMGMTLNMARPMSWFISFILLGLPIAVLIVITIFS >Mature_366_residues MMEGLLLSGVLFLTGLLFLLNGRFVRRNIIFSVFVPESETDNGAIASVKGQYRKQILMLAIAVALLFIVIYLFASHSAAL LSFVVLLHVLIIGAIIIYKSAHDHLKAVKLIEEWMKDIKVVKATDTRLMTESTPLPNVLYVMQLIAFIAAFIFVALNYDN IPETIATHWNFEGIADDFSQKNFFSVFSPGLLGLAILLSLWASSKGTRFFNTTVNPAVKDASINFIKNSKLINSMMIHLI SFTMTLLFILIFIRPVVYKDNYLPNGIMMMLIGMLLLITVACIYLQISEDKKYRQAVATTDKAPYYNEDHYIFGLFYYNP DDLNVWVPKLSEMGMTLNMARPMSWFISFILLGLPIAVLIVITIFS
Specific function: Unknown
COG id: COG4194
COG function: function code R; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41345; Mature: 41345
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEGLLLSGVLFLTGLLFLLNGRFVRRNIIFSVFVPESETDNGAIASVKGQYRKQILMLA CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHH IAVALLFIVIYLFASHSAALLSFVVLLHVLIIGAIIIYKSAHDHLKAVKLIEEWMKDIKV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEE VKATDTRLMTESTPLPNVLYVMQLIAFIAAFIFVALNYDNIPETIATHWNFEGIADDFSQ EEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHCC KNFFSVFSPGLLGLAILLSLWASSKGTRFFNTTVNPAVKDASINFIKNSKLINSMMIHLI CCHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH SFTMTLLFILIFIRPVVYKDNYLPNGIMMMLIGMLLLITVACIYLQISEDKKYRQAVATT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC DKAPYYNEDHYIFGLFYYNPDDLNVWVPKLSEMGMTLNMARPMSWFISFILLGLPIAVLI CCCCCCCCCCEEEEEEEECCCCCEEECCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHH VITIFS HHHHCC >Mature Secondary Structure MMEGLLLSGVLFLTGLLFLLNGRFVRRNIIFSVFVPESETDNGAIASVKGQYRKQILMLA CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHH IAVALLFIVIYLFASHSAALLSFVVLLHVLIIGAIIIYKSAHDHLKAVKLIEEWMKDIKV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEE VKATDTRLMTESTPLPNVLYVMQLIAFIAAFIFVALNYDNIPETIATHWNFEGIADDFSQ EEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHCC KNFFSVFSPGLLGLAILLSLWASSKGTRFFNTTVNPAVKDASINFIKNSKLINSMMIHLI CCHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH SFTMTLLFILIFIRPVVYKDNYLPNGIMMMLIGMLLLITVACIYLQISEDKKYRQAVATT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC DKAPYYNEDHYIFGLFYYNPDDLNVWVPKLSEMGMTLNMARPMSWFISFILLGLPIAVLI CCCCCCCCCCEEEEEEEECCCCCEEECCCHHHCCCEEECCCHHHHHHHHHHHHHHHHHHH VITIFS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA