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The map label for this gene is ydcR [C]

Identifier: 222151276

GI number: 222151276

Start: 1135827

End: 1136195

Strand: Direct

Name: ydcR [C]

Synonym: MCCL_1029

Alternate gene names: 222151276

Gene position: 1135827-1136195 (Clockwise)

Preceding gene: 222151275

Following gene: 222151277

Centisome position: 54.03

GC content: 38.21

Gene sequence:

>369_bases
ATGTACATAGAGATTGATGAAACGAGTAGGGTACCGGTATATTTACAGCTTGCCAATCAAATGATTCATCATATTGCAGA
AGGGAATGTCGTACCTTATGATCAATTACCTTCTGGTCGTGCATTTGCGAAGAGTCTTCAGATTAATATGCATACGGTGA
ACAAAGCCTATCATTATCTAGAGGAGAAACAATTGATTCTTGTGCAGCCGAAGTCCGGAGCGATAATTCATCCTGATGCT
TTAAAGGCTGCGACAAAAGTTGAACGGGAAGATTTAATAAGTCGTTTGAAACCGATTATTGATGAAGCAAAGTGCAAACA
ATTGGATGTAGCTGATTTACTGAAATTAATTGAAAAGGGAGAGGGTTAA

Upstream 100 bases:

>100_bases
TGTAATCCTACACCAATCTGTTATAATAAAAATATAACAGATTGGTTTTATTTTTGTCTTTAAATCTGTTCTATACTTTA
TATAACAGAGAGGTGGTTCA

Downstream 100 bases:

>100_bases
TGATGGAAGGTTTATTACTTAGTGGCGTATTATTTTTAACCGGCTTATTATTCTTATTGAATGGTCGTTTCGTTCGTCGT
AATATAATATTTAGTGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Gntr Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator; Transcription Regulator GntR Family

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MYIEIDETSRVPVYLQLANQMIHHIAEGNVVPYDQLPSGRAFAKSLQINMHTVNKAYHYLEEKQLILVQPKSGAIIHPDA
LKAATKVEREDLISRLKPIIDEAKCKQLDVADLLKLIEKGEG

Sequences:

>Translated_122_residues
MYIEIDETSRVPVYLQLANQMIHHIAEGNVVPYDQLPSGRAFAKSLQINMHTVNKAYHYLEEKQLILVQPKSGAIIHPDA
LKAATKVEREDLISRLKPIIDEAKCKQLDVADLLKLIEKGEG
>Mature_122_residues
MYIEIDETSRVPVYLQLANQMIHHIAEGNVVPYDQLPSGRAFAKSLQINMHTVNKAYHYLEEKQLILVQPKSGAIIHPDA
LKAATKVEREDLISRLKPIIDEAKCKQLDVADLLKLIEKGEG

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13772; Mature: 13772

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIEIDETSRVPVYLQLANQMIHHIAEGNVVPYDQLPSGRAFAKSLQINMHTVNKAYHYL
CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EEKQLILVQPKSGAIIHPDALKAATKVEREDLISRLKPIIDEAKCKQLDVADLLKLIEKG
CCCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
EG
CC
>Mature Secondary Structure
MYIEIDETSRVPVYLQLANQMIHHIAEGNVVPYDQLPSGRAFAKSLQINMHTVNKAYHYL
CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EEKQLILVQPKSGAIIHPDALKAATKVEREDLISRLKPIIDEAKCKQLDVADLLKLIEKG
CCCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
EG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA