Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is 222151228

Identifier: 222151228

GI number: 222151228

Start: 1076347

End: 1077309

Strand: Direct

Name: 222151228

Synonym: MCCL_0979

Alternate gene names: NA

Gene position: 1076347-1077309 (Clockwise)

Preceding gene: 222151227

Following gene: 222151229

Centisome position: 51.2

GC content: 35.72

Gene sequence:

>963_bases
ATGATGACTGAGGTTAATAAATCTATATATCTAGATGTAGCAAGAAGATATTACGATATGCAATCTTTGTATGAAGTAGT
AGATATTGTATACGAAAATGAACAGAAAGAACTCTTTCTGCACCTATCAGATAATGAAGCATTTAGGGTGGAGATGAATC
TTTTTAAGAAGACACCTTATAAAGCGTATTCAAAGCAAGAAATTAATGATCTGTGTAAATACGCATATGAACGTAATGTA
ATGATCATCCCAGTGTTAGACATACCTTCGCATTCAGGGGGATGGTTGAATCTACTCAAACTTAATGATGAAGAGAGATA
CAATAAGGTTGTCTCTGATTTTGATGAACACACTGTAAACTATTGGGACGATGGAGAGCCTATTAAATTTATTAAGAGTA
TGATTGACGAGATTGCAGATGCATTCAAAATTCCTGGATATAAAGGGGAACAGATATTTCACCTTGGAATGGATGAGGTG
CCTGCTGCTATAAGTAATCAAAAATGGCTTTTTTGGTTTATGGAACATCTTTTCAAGCACGTTGAATCTCACAACTATAT
ACCGGTGATATGGAACGATCAAGTAACCCCAAAGTTTCTAGAAATGGCTTTAGATGCTGGGATGAGAGACAGTTTAAGAT
TCAGTTATTGGCAACAAAGCCTAAAAGGTACTGTATCTCCTGATGATATAATGAATAACTTCAAACTCTATAACGGAAAC
TCTTACCCTCAGACGTTCAGCGCAAAGACGTTAGATTCGAAGAAGGATATGGAATACATGAAACAGCATTCAGGGATTGA
TAAATTTAATGTTATAGGAGACATAACGTATGAAGCAAAAATAAGAAATGTTTGTGGCTCGTTACTTACGCTATGGGGAG
AGGATTCAGAATCTCGTCCAGAAAAGGAAATTATCACAGAACTAAGAAGAATGTTTACCGCATTCGTACAGGAAGCTAAA
TAG

Upstream 100 bases:

>100_bases
CTCACTATACGAAGAGATTAAACAAGAAATAAAGACTATAAAAGCAGAAAAGATATCTTAAACAGTTGGATCAAACATCT
TATTTAAAAGGAGAATTCAA

Downstream 100 bases:

>100_bases
TAAGAGGATGTTAAAACATAAATGATAAGCATTAGGCAGATAGCCTGATGCTTATTTTAATTGGAGGAATTTATAAATGA
ATAAAGAACTACAGTTAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-N-Acetylhexosaminidase; Glycoside Hydrolase Family Protein; Lacto-N-Biosidase; Glycoside Hydrolase Family

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPYKAYSKQEINDLCKYAYERNV
MIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVNYWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEV
PAAISNQKWLFWFMEHLFKHVESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN
SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRPEKEIITELRRMFTAFVQEAK

Sequences:

>Translated_320_residues
MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPYKAYSKQEINDLCKYAYERNV
MIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVNYWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEV
PAAISNQKWLFWFMEHLFKHVESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN
SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRPEKEIITELRRMFTAFVQEAK
>Mature_320_residues
MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPYKAYSKQEINDLCKYAYERNV
MIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVNYWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEV
PAAISNQKWLFWFMEHLFKHVESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN
SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRPEKEIITELRRMFTAFVQEAK

Specific function: Unknown

COG id: COG3525

COG function: function code G; N-acetyl-beta-hexosaminidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37725; Mature: 37725

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHCCCC
KAYSKQEINDLCKYAYERNVMIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVN
HHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCC
YWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEVPAAISNQKWLFWFMEHLFKH
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHH
VESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN
HHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCC
SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRP
CCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHEECEEHHHHHHHHHHHHHHHCCCCCCCCC
EKEIITELRRMFTAFVQEAK
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMTEVNKSIYLDVARRYYDMQSLYEVVDIVYENEQKELFLHLSDNEAFRVEMNLFKKTPY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEHHHCCCC
KAYSKQEINDLCKYAYERNVMIIPVLDIPSHSGGWLNLLKLNDEERYNKVVSDFDEHTVN
HHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCC
YWDDGEPIKFIKSMIDEIADAFKIPGYKGEQIFHLGMDEVPAAISNQKWLFWFMEHLFKH
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHH
VESHNYIPVIWNDQVTPKFLEMALDAGMRDSLRFSYWQQSLKGTVSPDDIMNNFKLYNGN
HHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCC
SYPQTFSAKTLDSKKDMEYMKQHSGIDKFNVIGDITYEAKIRNVCGSLLTLWGEDSESRP
CCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHEECEEHHHHHHHHHHHHHHHCCCCCCCCC
EKEIITELRRMFTAFVQEAK
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA