| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151183
Identifier: 222151183
GI number: 222151183
Start: 1027540
End: 1029714
Strand: Direct
Name: 222151183
Synonym: MCCL_0934
Alternate gene names: NA
Gene position: 1027540-1029714 (Clockwise)
Preceding gene: 222151182
Following gene: 222151184
Centisome position: 48.88
GC content: 34.76
Gene sequence:
>2175_bases ATGATTTATCTATTCAATGTCAAAAAAGAATTGATAAAAGTTATCCCTCGCAGAAATATCGTTAGTGCAATTCAAGAACT TGAAATAAATGGTCTGTATACTGCTGAAATTGAAGTTCCTCTATTCTATAAAACTGAACAGGGTCAAATCTTCAATCATA AGAAATCATTCGATAACGCTTTATTTTTTGGTCATTTTGACTATCGTAAAAAGTTTCAATTGTATAAAATTCATAATAGA AAAATTGATGGCAAACAACTGATTATTACAGGTGTTCATCTATTTTTCGACGAAGCTAAAGCGATGAGTGTTATTCGTGA TAAGCGACTAATCAATGCTGATGCTCGAAACGTTGCGAATGTCGCGTTTGAGGGTACAGGATGGACTGTTCGAGATTACG ACACGACAAAAGAAAAAAATATAGATTTGTATTATATGACACCGATAGATGCTAGGAAATTAATTATCGAAGAATATAAT GTAGAGTTTGACTATGACTTTTCTTTTGATGGCAGGAAGATTACTTCTAAAAATATTTATATTCGTAATAAATTAGGCAG ATGGACTGGCGATAGATATCATTACGGAACAAACATACTCAGTATCACGCAAGAGCAAGATGATGCAGAAGTTTATACTG CGGCGATAGGTAGAGGGACCAGTGATGATACGAATACAGCTTTAAACGCTAAAGTCCTTTTTGATGATTTGACGTGGTCT AAAGATGGTTACAACAAGCCTTTAGGTCAAGATTATTTAGAAATCGTTAGCGCTACAGAAAAATATGGATACTATGACGA AAAAACAGGTAGAATAAAACCTCGAATAGCGATAATTGAATTTAGTGATATCCAAGATCAGAAAGTTTTAGCTGATAAAA CCTGGGAGTGGTTAAAACAAAACTGCGTGCCTAAAGTCACATACTCGACTACTGTTTCAAAGGTAGGAGAGTACTATTTA GGTGATGAAATCGCGATTATCTACAAAGAAATTGATATCATTAAAAAAGCTCGTGTAGAAAATATGAGAGTGAACCTTCT TAATCACGACTTAACCGAATTAGGTTTAGGTGATTATACTTATTTTAAACAAGATAAATATAGAGAGCGTATAAGCAATG AAATCAAGGAAACAAAAAAAGAAGCTAATAGCTACATTGTTAAACTCAAAAAAGAATTCGATGCAAACTTTGAAGAGCAA ACACTGAGTTTCGCTAAAGCTATTGAACAAGTAAAGATTAATGCGCAATCTGAAGTTGAATCGGCAGAAAAAAGACTGTC AGATGAAATAGATAATGGATTGAGTGCCTTAAAACAACCGAACGCGTTACCATCATCTGTTCTGCAAATAGACGAATTAT TAATAAACAGGTTGATATCTGATAATATGTTCGCGAACACTTTAGGTTCAAATTATCTTTTTAGCGAGATCATAAAAACA AAATCTCTTGAAGCAGTTAATGCAAATATTTCAAATCTGAGGTCTAACATACTCACTTCTAACGTGATTAAAGCAGAACA CATTGATTCTGGCACAGCACTTATAGATAAATTATTTTCTAATAGTGCAAATATAACTAGATTGACGAGTAAGTCGGCAT TTATCAAAGAAATACAAGCGATTGAGGTTATAGCTTATCGTCTTGAAGCGAGGGATAAACAGGCTAGTGTCAACATTGAA AATGGCTCAATCACAATGAATCGTGACAATGGATCTAGAATGGATATCAGTTTGAATGGTATTCAAAGTTTTAACAATGG TGGTTCGTTACTTTTCAGCTTAACACCAACACTTGTAACAACCTCTGCTGTAGGCACATCTGTAAGTAACGTTTACCTTG GCACAGCACCGAACGCAGAAGCACGTGTCGTTAATATGAATGGTATTCCTGGTGATGGTGAAATTGGCAGTTATGCATAT AGACCAATACGAACTTTAGCTATTAAATTTCCGTTAAATGCAAATGGGTATATAGGGATTGATGGTAGCGAACTAAGGAT AATGTCAGATGGTTTGGTAGAAGGTGGATATAAAAGCGTTCGTGCTGACAAAGGATATTTCTCTACAGTTGATGCAAACA ATGAAATTAGTGGTGCTCACTTCTATATCAGACCAAAACGTGGTGGGGAACTTCGAGCAACTTATAACGATGGGTGGAGA AACTTCTTATGCTAA
Upstream 100 bases:
>100_bases TCACATCTGATTGGGAAGAATTTGACATAAAAACAGGAGATCAAGTCGCTTTCCTTCCAACACCGAGTAAAATCACCATT AAATATCGAGGTGTATTTTT
Downstream 100 bases:
>100_bases CTTTCGTTCAAACGGTATCTATGCACCATGGATTGATTATAACGGACATATACCAGGATCACACTTTTATATTAGACCAG CGTATGGGGGAGAAGTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Protein; Phage-Associated Peptidase
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MIYLFNVKKELIKVIPRRNIVSAIQELEINGLYTAEIEVPLFYKTEQGQIFNHKKSFDNALFFGHFDYRKKFQLYKIHNR KIDGKQLIITGVHLFFDEAKAMSVIRDKRLINADARNVANVAFEGTGWTVRDYDTTKEKNIDLYYMTPIDARKLIIEEYN VEFDYDFSFDGRKITSKNIYIRNKLGRWTGDRYHYGTNILSITQEQDDAEVYTAAIGRGTSDDTNTALNAKVLFDDLTWS KDGYNKPLGQDYLEIVSATEKYGYYDEKTGRIKPRIAIIEFSDIQDQKVLADKTWEWLKQNCVPKVTYSTTVSKVGEYYL GDEIAIIYKEIDIIKKARVENMRVNLLNHDLTELGLGDYTYFKQDKYRERISNEIKETKKEANSYIVKLKKEFDANFEEQ TLSFAKAIEQVKINAQSEVESAEKRLSDEIDNGLSALKQPNALPSSVLQIDELLINRLISDNMFANTLGSNYLFSEIIKT KSLEAVNANISNLRSNILTSNVIKAEHIDSGTALIDKLFSNSANITRLTSKSAFIKEIQAIEVIAYRLEARDKQASVNIE NGSITMNRDNGSRMDISLNGIQSFNNGGSLLFSLTPTLVTTSAVGTSVSNVYLGTAPNAEARVVNMNGIPGDGEIGSYAY RPIRTLAIKFPLNANGYIGIDGSELRIMSDGLVEGGYKSVRADKGYFSTVDANNEISGAHFYIRPKRGGELRATYNDGWR NFLC
Sequences:
>Translated_724_residues MIYLFNVKKELIKVIPRRNIVSAIQELEINGLYTAEIEVPLFYKTEQGQIFNHKKSFDNALFFGHFDYRKKFQLYKIHNR KIDGKQLIITGVHLFFDEAKAMSVIRDKRLINADARNVANVAFEGTGWTVRDYDTTKEKNIDLYYMTPIDARKLIIEEYN VEFDYDFSFDGRKITSKNIYIRNKLGRWTGDRYHYGTNILSITQEQDDAEVYTAAIGRGTSDDTNTALNAKVLFDDLTWS KDGYNKPLGQDYLEIVSATEKYGYYDEKTGRIKPRIAIIEFSDIQDQKVLADKTWEWLKQNCVPKVTYSTTVSKVGEYYL GDEIAIIYKEIDIIKKARVENMRVNLLNHDLTELGLGDYTYFKQDKYRERISNEIKETKKEANSYIVKLKKEFDANFEEQ TLSFAKAIEQVKINAQSEVESAEKRLSDEIDNGLSALKQPNALPSSVLQIDELLINRLISDNMFANTLGSNYLFSEIIKT KSLEAVNANISNLRSNILTSNVIKAEHIDSGTALIDKLFSNSANITRLTSKSAFIKEIQAIEVIAYRLEARDKQASVNIE NGSITMNRDNGSRMDISLNGIQSFNNGGSLLFSLTPTLVTTSAVGTSVSNVYLGTAPNAEARVVNMNGIPGDGEIGSYAY RPIRTLAIKFPLNANGYIGIDGSELRIMSDGLVEGGYKSVRADKGYFSTVDANNEISGAHFYIRPKRGGELRATYNDGWR NFLC >Mature_724_residues MIYLFNVKKELIKVIPRRNIVSAIQELEINGLYTAEIEVPLFYKTEQGQIFNHKKSFDNALFFGHFDYRKKFQLYKIHNR KIDGKQLIITGVHLFFDEAKAMSVIRDKRLINADARNVANVAFEGTGWTVRDYDTTKEKNIDLYYMTPIDARKLIIEEYN VEFDYDFSFDGRKITSKNIYIRNKLGRWTGDRYHYGTNILSITQEQDDAEVYTAAIGRGTSDDTNTALNAKVLFDDLTWS KDGYNKPLGQDYLEIVSATEKYGYYDEKTGRIKPRIAIIEFSDIQDQKVLADKTWEWLKQNCVPKVTYSTTVSKVGEYYL GDEIAIIYKEIDIIKKARVENMRVNLLNHDLTELGLGDYTYFKQDKYRERISNEIKETKKEANSYIVKLKKEFDANFEEQ TLSFAKAIEQVKINAQSEVESAEKRLSDEIDNGLSALKQPNALPSSVLQIDELLINRLISDNMFANTLGSNYLFSEIIKT KSLEAVNANISNLRSNILTSNVIKAEHIDSGTALIDKLFSNSANITRLTSKSAFIKEIQAIEVIAYRLEARDKQASVNIE NGSITMNRDNGSRMDISLNGIQSFNNGGSLLFSLTPTLVTTSAVGTSVSNVYLGTAPNAEARVVNMNGIPGDGEIGSYAY RPIRTLAIKFPLNANGYIGIDGSELRIMSDGLVEGGYKSVRADKGYFSTVDANNEISGAHFYIRPKRGGELRATYNDGWR NFLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82038; Mature: 82038
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYLFNVKKELIKVIPRRNIVSAIQELEINGLYTAEIEVPLFYKTEQGQIFNHKKSFDNA CEEEEECHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEECCCCCCCCE LFFGHFDYRKKFQLYKIHNRKIDGKQLIITGVHLFFDEAKAMSVIRDKRLINADARNVAN EEEEECCHHHCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VAFEGTGWTVRDYDTTKEKNIDLYYMTPIDARKLIIEEYNVEFDYDFSFDGRKITSKNIY EEECCCCCEEECCCCCCCCCEEEEEECCCCHHHHEEECCCCEEEEEECCCCCEEECCEEE IRNKLGRWTGDRYHYGTNILSITQEQDDAEVYTAAIGRGTSDDTNTALNAKVLFDDLTWS EEECCCCCCCCCEEECCCEEEEECCCCCHHEEEHHHCCCCCCCCCCEEEEEEEEECCCCC KDGYNKPLGQDYLEIVSATEKYGYYDEKTGRIKPRIAIIEFSDIQDQKVLADKTWEWLKQ CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH NCVPKVTYSTTVSKVGEYYLGDEIAIIYKEIDIIKKARVENMRVNLLNHDLTELGLGDYT CCCCCEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCH YFKQDKYRERISNEIKETKKEANSYIVKLKKEFDANFEEQTLSFAKAIEQVKINAQSEVE HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH SAEKRLSDEIDNGLSALKQPNALPSSVLQIDELLINRLISDNMFANTLGSNYLFSEIIKT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH KSLEAVNANISNLRSNILTSNVIKAEHIDSGTALIDKLFSNSANITRLTSKSAFIKEIQA CCCHHHCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHH IEVIAYRLEARDKQASVNIENGSITMNRDNGSRMDISLNGIQSFNNGGSLLFSLTPTLVT HHHHHHHHHCCCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCHHEE TSAVGTSVSNVYLGTAPNAEARVVNMNGIPGDGEIGSYAYRPIRTLAIKFPLNANGYIGI HHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHCCEEEEEEEECCCCCCEEEE DGSELRIMSDGLVEGGYKSVRADKGYFSTVDANNEISGAHFYIRPKRGGELRATYNDGWR CCCEEEEEECCCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCH NFLC HCCC >Mature Secondary Structure MIYLFNVKKELIKVIPRRNIVSAIQELEINGLYTAEIEVPLFYKTEQGQIFNHKKSFDNA CEEEEECHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEECCCCCCCCE LFFGHFDYRKKFQLYKIHNRKIDGKQLIITGVHLFFDEAKAMSVIRDKRLINADARNVAN EEEEECCHHHCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VAFEGTGWTVRDYDTTKEKNIDLYYMTPIDARKLIIEEYNVEFDYDFSFDGRKITSKNIY EEECCCCCEEECCCCCCCCCEEEEEECCCCHHHHEEECCCCEEEEEECCCCCEEECCEEE IRNKLGRWTGDRYHYGTNILSITQEQDDAEVYTAAIGRGTSDDTNTALNAKVLFDDLTWS EEECCCCCCCCCEEECCCEEEEECCCCCHHEEEHHHCCCCCCCCCCEEEEEEEEECCCCC KDGYNKPLGQDYLEIVSATEKYGYYDEKTGRIKPRIAIIEFSDIQDQKVLADKTWEWLKQ CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH NCVPKVTYSTTVSKVGEYYLGDEIAIIYKEIDIIKKARVENMRVNLLNHDLTELGLGDYT CCCCCEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCEEEEEECCCHHHCCCCCCH YFKQDKYRERISNEIKETKKEANSYIVKLKKEFDANFEEQTLSFAKAIEQVKINAQSEVE HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH SAEKRLSDEIDNGLSALKQPNALPSSVLQIDELLINRLISDNMFANTLGSNYLFSEIIKT HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH KSLEAVNANISNLRSNILTSNVIKAEHIDSGTALIDKLFSNSANITRLTSKSAFIKEIQA CCCHHHCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHH IEVIAYRLEARDKQASVNIENGSITMNRDNGSRMDISLNGIQSFNNGGSLLFSLTPTLVT HHHHHHHHHCCCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCHHEE TSAVGTSVSNVYLGTAPNAEARVVNMNGIPGDGEIGSYAYRPIRTLAIKFPLNANGYIGI HHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHCCEEEEEEEECCCCCCEEEE DGSELRIMSDGLVEGGYKSVRADKGYFSTVDANNEISGAHFYIRPKRGGELRATYNDGWR CCCEEEEEECCCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCH NFLC HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA