Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is 222151171

Identifier: 222151171

GI number: 222151171

Start: 1013816

End: 1015252

Strand: Direct

Name: 222151171

Synonym: MCCL_0922

Alternate gene names: NA

Gene position: 1013816-1015252 (Clockwise)

Preceding gene: 222151170

Following gene: 222151172

Centisome position: 48.22

GC content: 35.14

Gene sequence:

>1437_bases
TTGAATTACAATTACAAAGAAAGTTATATCGCTAATGCGAATGATGACTTCACGATTAATAATGAAGAAGATATCTATAA
CGCAGACGTGATTAGGGAGTTCGTGCAGCGTCATAAGTTGGAGCAGTTGCCACGACTACAGTTTTTAGAAGATTATTATC
TGAATAGAAATGTTGATGTATTACGTCCTAACAGACGAGCTGAAACAGATAGAAATAAAGCAGATCATCGAGCAACTCAT
AATTACGCAAAGTATATCAGTCAGTTTATCGTCGGCTACATGACAGGTAATCCTATAACTATCAGTCACAATGATAGTTA
TACGCAACAAGTGATTATGGATTTAAATGACTTCAACGATGCAGATTCTGTGAACAGTCAATTATCATTAGACCTATCGA
TTTATGGTAGAGCGTTTGAAATTGTTTACAGAAACGAAGAAGATGAAGATAAGTTTCTGCCACTTAATCCAAAAAATACT
TTCTGCGTTTACAATACTGACATTGAAAGAAAAATGGTCGCGGGTATCAGATATAGTAATTCAACTGATAGTGATGGTAA
ACCTTTAGAACGTATCGAAGTCTATACCAATACTAAAGTATGTTATTACGAGTTAATGGATGGTAATTATCATCTTACTG
ATGAGCAAGAACATTACTATAATGAGCCTCAGATTACAGAATACGTAAACGATAGCTTTAAACAGGGGGATTATGAAAAT
GTAATCAGCCTGATTGATTTATACGATAGCGCTCAGTCAGATACAGCTAACTACATGACAGATTTAAACGATGCGATGTT
AGCAATTATAGGTAATGTGGATTTAACAGGCGACGAAGCTATTAAGTTCAAGAATGCTAATATGATTAAAGTCACACCAG
GAATGACTGCATCCGGTGGAGAAGGTAAAGCAGATGTTAAGTATGTCTATAAAGAATATGATGTGAATGGTTCTGAAGCA
TATAAAACACGTTTAGAAAATGACATTCATAAGTTCACAAATACACCTGATTTAAACGATGATAACTTTGCAGGCGCGCA
ATCAGGCGAATCCATGAAGTATAAGTTATTTGGTCTAGATCAAAAACGTGCGACTAAAGAAAGATTTTTCAAACGCGGCC
TGATGAAACGTTATAGATTATTATTCCGTATGCATAACATTGTCGGAAATGGATTAGATCATACAGACATCACAGTAACA
TTCACACCTAATCTACCTAAAGCTATTAAAGAATCAGTTGATGTTTTTACTGCATTGCAAGGCTCTATATCAGAAAAGAC
TTTGCTCAGTCAATTGCCTTTTATCGATAATCCTGATGAAGAAGCAGAGCAAATGAAATTAGAAAGAGAAGCGCGTCAAC
AGGAACTGAAAAACTCTCGTCCTGACATTTACGATCTAACTAAAGTAGGTGTTGATAATGCCAAAGAAAAACAATAA

Upstream 100 bases:

>100_bases
CGCATTTAGATACGCTGTTTATACTCATACGTCCCATCAAAAACCACTATCAACAAACGACTTGATGAACATTAAGAGTC
TTTTTTAAGGAGGGAATATA

Downstream 100 bases:

>100_bases
GCAGTCGTATTGGATTGAACGTGAGAAAGATAACCTCACAACAGAATTAATGAAAGACGAGCAGGTATCTAATGAAGTGA
AACGCATACTAGAGAACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Portal Protein; Phage Portal Protein SPP1 Family; SPP1 Family Phage Portal Protein; Phage Portal Protein SPP1 Gp6-Like; Phage Protein; Phage Related Protein; Phage-Like Protein; Bacteriophage Portal Protein; Prophage Lp1 Protein; Phage-Related Portal Protein; Portal Protein Truncation

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MNYNYKESYIANANDDFTINNEEDIYNADVIREFVQRHKLEQLPRLQFLEDYYLNRNVDVLRPNRRAETDRNKADHRATH
NYAKYISQFIVGYMTGNPITISHNDSYTQQVIMDLNDFNDADSVNSQLSLDLSIYGRAFEIVYRNEEDEDKFLPLNPKNT
FCVYNTDIERKMVAGIRYSNSTDSDGKPLERIEVYTNTKVCYYELMDGNYHLTDEQEHYYNEPQITEYVNDSFKQGDYEN
VISLIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLTGDEAIKFKNANMIKVTPGMTASGGEGKADVKYVYKEYDVNGSEA
YKTRLENDIHKFTNTPDLNDDNFAGAQSGESMKYKLFGLDQKRATKERFFKRGLMKRYRLLFRMHNIVGNGLDHTDITVT
FTPNLPKAIKESVDVFTALQGSISEKTLLSQLPFIDNPDEEAEQMKLEREARQQELKNSRPDIYDLTKVGVDNAKEKQ

Sequences:

>Translated_478_residues
MNYNYKESYIANANDDFTINNEEDIYNADVIREFVQRHKLEQLPRLQFLEDYYLNRNVDVLRPNRRAETDRNKADHRATH
NYAKYISQFIVGYMTGNPITISHNDSYTQQVIMDLNDFNDADSVNSQLSLDLSIYGRAFEIVYRNEEDEDKFLPLNPKNT
FCVYNTDIERKMVAGIRYSNSTDSDGKPLERIEVYTNTKVCYYELMDGNYHLTDEQEHYYNEPQITEYVNDSFKQGDYEN
VISLIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLTGDEAIKFKNANMIKVTPGMTASGGEGKADVKYVYKEYDVNGSEA
YKTRLENDIHKFTNTPDLNDDNFAGAQSGESMKYKLFGLDQKRATKERFFKRGLMKRYRLLFRMHNIVGNGLDHTDITVT
FTPNLPKAIKESVDVFTALQGSISEKTLLSQLPFIDNPDEEAEQMKLEREARQQELKNSRPDIYDLTKVGVDNAKEKQ
>Mature_478_residues
MNYNYKESYIANANDDFTINNEEDIYNADVIREFVQRHKLEQLPRLQFLEDYYLNRNVDVLRPNRRAETDRNKADHRATH
NYAKYISQFIVGYMTGNPITISHNDSYTQQVIMDLNDFNDADSVNSQLSLDLSIYGRAFEIVYRNEEDEDKFLPLNPKNT
FCVYNTDIERKMVAGIRYSNSTDSDGKPLERIEVYTNTKVCYYELMDGNYHLTDEQEHYYNEPQITEYVNDSFKQGDYEN
VISLIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLTGDEAIKFKNANMIKVTPGMTASGGEGKADVKYVYKEYDVNGSEA
YKTRLENDIHKFTNTPDLNDDNFAGAQSGESMKYKLFGLDQKRATKERFFKRGLMKRYRLLFRMHNIVGNGLDHTDITVT
FTPNLPKAIKESVDVFTALQGSISEKTLLSQLPFIDNPDEEAEQMKLEREARQQELKNSRPDIYDLTKVGVDNAKEKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55314; Mature: 55314

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYNYKESYIANANDDFTINNEEDIYNADVIREFVQRHKLEQLPRLQFLEDYYLNRNVDV
CCCCCCCCEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEE
LRPNRRAETDRNKADHRATHNYAKYISQFIVGYMTGNPITISHNDSYTQQVIMDLNDFND
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHCCCC
ADSVNSQLSLDLSIYGRAFEIVYRNEEDEDKFLPLNPKNTFCVYNTDIERKMVAGIRYSN
CCCCCCEEEEEEEECCEEEEEEECCCCCCCCEECCCCCCCEEEECCCHHHHHHHCEEECC
STDSDGKPLERIEVYTNTKVCYYELMDGNYHLTDEQEHYYNEPQITEYVNDSFKQGDYEN
CCCCCCCCCCEEEEEECCEEEEEEEECCEEEECCCHHHHCCCCHHHHHHHHHHCCCCHHH
VISLIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLTGDEAIKFKNANMIKVTPGMTASGG
HHHHHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCCCCCEEEECCCCEEEECCCCCCCCC
EGKADVKYVYKEYDVNGSEAYKTRLENDIHKFTNTPDLNDDNFAGAQSGESMKYKLFGLD
CCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCC
QKRATKERFFKRGLMKRYRLLFRMHNIVGNGLDHTDITVTFTPNLPKAIKESVDVFTALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
GSISEKTLLSQLPFIDNPDEEAEQMKLEREARQQELKNSRPDIYDLTKVGVDNAKEKQ
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCC
>Mature Secondary Structure
MNYNYKESYIANANDDFTINNEEDIYNADVIREFVQRHKLEQLPRLQFLEDYYLNRNVDV
CCCCCCCCEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEE
LRPNRRAETDRNKADHRATHNYAKYISQFIVGYMTGNPITISHNDSYTQQVIMDLNDFND
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHCCCC
ADSVNSQLSLDLSIYGRAFEIVYRNEEDEDKFLPLNPKNTFCVYNTDIERKMVAGIRYSN
CCCCCCEEEEEEEECCEEEEEEECCCCCCCCEECCCCCCCEEEECCCHHHHHHHCEEECC
STDSDGKPLERIEVYTNTKVCYYELMDGNYHLTDEQEHYYNEPQITEYVNDSFKQGDYEN
CCCCCCCCCCEEEEEECCEEEEEEEECCEEEECCCHHHHCCCCHHHHHHHHHHCCCCHHH
VISLIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLTGDEAIKFKNANMIKVTPGMTASGG
HHHHHHHHHCCCCCHHHHHHHHHHEEEEEEECCCCCCCCEEEECCCCEEEECCCCCCCCC
EGKADVKYVYKEYDVNGSEAYKTRLENDIHKFTNTPDLNDDNFAGAQSGESMKYKLFGLD
CCCCHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCC
QKRATKERFFKRGLMKRYRLLFRMHNIVGNGLDHTDITVTFTPNLPKAIKESVDVFTALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
GSISEKTLLSQLPFIDNPDEEAEQMKLEREARQQELKNSRPDIYDLTKVGVDNAKEKQ
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA