| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is glnA [H]
Identifier: 222151149
GI number: 222151149
Start: 994240
End: 995577
Strand: Direct
Name: glnA [H]
Synonym: MCCL_0900
Alternate gene names: 222151149
Gene position: 994240-995577 (Clockwise)
Preceding gene: 222151148
Following gene: 222151156
Centisome position: 47.29
GC content: 38.42
Gene sequence:
>1338_bases ATGGCGAAATTTACAAGAGAAGACATCATCAAGTTAGCAGAGGAATCAAACGTACGTTATTTAAGACTACAATTTTCTGA TATTCTAGGAACGATTAAAAACGTAGAGGTACCCATCAGCCAGTTAGAGAAAGTACTAGACAATGAAATGATGTTTGATG GTTCATCAATCGAAGGGTTTGTACGTATCGAAGAATCAGATATGAAATTACATCCAGACTTAGACACATGGGTTATTTTC CCTTGGACTTCAGACAAAGGTAAAGTCGCACGTTTAATCTGTGATGTGTATAAGCCAGACGGCACACCATTCTCAGGAGA TCCACGTAGTAACTTAAAACGTGTATTGAAAGAAATGGAAGCTTTAGGATTTACAGACTTTAACTTAGGACCAGAACCAG AATTCTTCTTATTCAAATTAGATGAAAAAGGGGAACCAACACTTGAATTAAATGATAATGGTGGATACTTCGATTTAGCG CCTACAGATTTAGGTGAGAACTGTCGTCGAGACATCGTTTTAGAACTTGAAGACATGGGCTTTGATATAGAAGCAAGTCA CCACGAAGTAGCGCCAGGTCAGCACGAAATCGACTTTAAATATGCAGATGCAGTTACTGCATGTGATAACATTCAAACAT TCAAATTAGTTGTTAAGACAATTGCGCGTAAACATAATCTTCATGCAACATTTATGCCTAAACCATTATATGGTGTAAAT GGTTCAGGTATGCACTTTAACGTTTCGTTATTCAAAGGACCGAAAGAAAATGCGTTCTATGATCCGAACGGAGAAATGGA ATTATCTGAAGATGCGCGTCACTTTATCGCAGGAGTTCTTAAACATGCAAGAGGATTTACTGCAGTGTGTAACCCATTAG TAAACTCTTACAAACGTTTAGTACCTGGTTATGAAGCACCAGTTTATATCGCATGGAGTGGCCAAAACCGTTCGCCATTA ATTCGTATTCCTTCATCACGTGGACTATCTACGCGTGTAGAAGTACGTTCAGTTGATCCATCTGCTAACCCATATATGGC ATTAGCAACGATTCTTCAAGCAGGATTAGATGGCATCAAGAATAAATTAGTTTGTCCAGCACCAGTTGATCAGAATATTT ATGAAATGAATCGTGAAGAACGTGAATCTGTTGGTGTAGAAGACTTACCATCAACACTTTACACGGCAATCAAAGCGATG AAAGAAGACGATATTTTAAAAGAAGCACTGGGTGACCACATCTATCGTGCATTCATCCATTCAAAAAATATTGAATGGGA CATGTACCGTATGCAAGTGTCTGAGTGGGAACGTGGCCAATATATGAAGCAGTATTAA
Upstream 100 bases:
>100_bases GAATCTCTTGATTACGAAGTTTCAAGGCTCGACCGTAGTAAAATCCCTATTAATCGTGGGGATCTGTCAAGATTTTTTAA ATAAACAACTGGAGGATATT
Downstream 100 bases:
>100_bases TTGCTTAAACCGTTGAAACTAAAATGTTTCGACGGTTTTTAATTTGTACCCAATTTGTAAAAAGCATCATAAAAATTATG CTCTGGGTGTTTTTTGGGTA
Product: glutamine-ammonia ligase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAKFTREDIIKLAEESNVRYLRLQFSDILGTIKNVEVPISQLEKVLDNEMMFDGSSIEGFVRIEESDMKLHPDLDTWVIF PWTSDKGKVARLICDVYKPDGTPFSGDPRSNLKRVLKEMEALGFTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLA PTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMPKPLYGVN GSGMHFNVSLFKGPKENAFYDPNGEMELSEDARHFIAGVLKHARGFTAVCNPLVNSYKRLVPGYEAPVYIAWSGQNRSPL IRIPSSRGLSTRVEVRSVDPSANPYMALATILQAGLDGIKNKLVCPAPVDQNIYEMNREERESVGVEDLPSTLYTAIKAM KEDDILKEALGDHIYRAFIHSKNIEWDMYRMQVSEWERGQYMKQY
Sequences:
>Translated_445_residues MAKFTREDIIKLAEESNVRYLRLQFSDILGTIKNVEVPISQLEKVLDNEMMFDGSSIEGFVRIEESDMKLHPDLDTWVIF PWTSDKGKVARLICDVYKPDGTPFSGDPRSNLKRVLKEMEALGFTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLA PTDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMPKPLYGVN GSGMHFNVSLFKGPKENAFYDPNGEMELSEDARHFIAGVLKHARGFTAVCNPLVNSYKRLVPGYEAPVYIAWSGQNRSPL IRIPSSRGLSTRVEVRSVDPSANPYMALATILQAGLDGIKNKLVCPAPVDQNIYEMNREERESVGVEDLPSTLYTAIKAM KEDDILKEALGDHIYRAFIHSKNIEWDMYRMQVSEWERGQYMKQY >Mature_444_residues AKFTREDIIKLAEESNVRYLRLQFSDILGTIKNVEVPISQLEKVLDNEMMFDGSSIEGFVRIEESDMKLHPDLDTWVIFP WTSDKGKVARLICDVYKPDGTPFSGDPRSNLKRVLKEMEALGFTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLAP TDLGENCRRDIVLELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMPKPLYGVNG SGMHFNVSLFKGPKENAFYDPNGEMELSEDARHFIAGVLKHARGFTAVCNPLVNSYKRLVPGYEAPVYIAWSGQNRSPLI RIPSSRGLSTRVEVRSVDPSANPYMALATILQAGLDGIKNKLVCPAPVDQNIYEMNREERESVGVEDLPSTLYTAIKAMK EDDILKEALGDHIYRAFIHSKNIEWDMYRMQVSEWERGQYMKQY
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=393, Percent_Identity=27.4809160305344, Blast_Score=133, Evalue=3e-31, Organism=Escherichia coli, GI1790301, Length=466, Percent_Identity=38.412017167382, Blast_Score=278, Evalue=6e-76, Organism=Escherichia coli, GI87081870, Length=459, Percent_Identity=27.8867102396514, Blast_Score=150, Evalue=1e-37,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 50551; Mature: 50420
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFTREDIIKLAEESNVRYLRLQFSDILGTIKNVEVPISQLEKVLDNEMMFDGSSIEGF CCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCEE VRIEESDMKLHPDLDTWVIFPWTSDKGKVARLICDVYKPDGTPFSGDPRSNLKRVLKEME EEEECCCCEECCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH ALGFTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLAPTDLGENCRRDIVLELEDMG HCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCC FDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMPKPLYGVN CEEECCCCCCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC GSGMHFNVSLFKGPKENAFYDPNGEMELSEDARHFIAGVLKHARGFTAVCNPLVNSYKRL CCCEEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VPGYEAPVYIAWSGQNRSPLIRIPSSRGLSTRVEVRSVDPSANPYMALATILQAGLDGIK CCCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH NKLVCPAPVDQNIYEMNREERESVGVEDLPSTLYTAIKAMKEDDILKEALGDHIYRAFIH CCEECCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKNIEWDMYRMQVSEWERGQYMKQY CCCCCEEHEEEEHHHHHCCHHHHCC >Mature Secondary Structure AKFTREDIIKLAEESNVRYLRLQFSDILGTIKNVEVPISQLEKVLDNEMMFDGSSIEGF CCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCEE VRIEESDMKLHPDLDTWVIFPWTSDKGKVARLICDVYKPDGTPFSGDPRSNLKRVLKEME EEEECCCCEECCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH ALGFTDFNLGPEPEFFLFKLDEKGEPTLELNDNGGYFDLAPTDLGENCRRDIVLELEDMG HCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEECCCCCCCCCCCCEEEEEECCC FDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMPKPLYGVN CEEECCCCCCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCC GSGMHFNVSLFKGPKENAFYDPNGEMELSEDARHFIAGVLKHARGFTAVCNPLVNSYKRL CCCEEEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VPGYEAPVYIAWSGQNRSPLIRIPSSRGLSTRVEVRSVDPSANPYMALATILQAGLDGIK CCCCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHH NKLVCPAPVDQNIYEMNREERESVGVEDLPSTLYTAIKAMKEDDILKEALGDHIYRAFIH CCEECCCCCCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKNIEWDMYRMQVSEWERGQYMKQY CCCCCEEHEEEEHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA