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The map label for this gene is glnR [H]

Identifier: 222151148

GI number: 222151148

Start: 993894

End: 994223

Strand: Direct

Name: glnR [H]

Synonym: MCCL_0899

Alternate gene names: 222151148

Gene position: 993894-994223 (Clockwise)

Preceding gene: 222151147

Following gene: 222151149

Centisome position: 47.28

GC content: 34.55

Gene sequence:

>330_bases
ATGCCGGTGTTTCCAATGAGTGTCGTTATGAAATTAACAGAGCTTTCTGCAAGGCAAATTAGATACTATGAATCACAGTC
GTTGATTACACCTGAACGAACAAGTGGGAACCAAAGACTATTTTCAATGAACGATCTGGATTTATTACTTGATATTAAAC
TGCTTTTAGAAAAAGGATTTAATATGAAGCGTATTAAATCGATTATCAATGAGGAGAAGTCACAACAACCCACATTTGAG
ATTAAAGAATCTCTTGATTACGAAGTTTCAAGGCTCGACCGTAGTAAAATCCCTATTAATCGTGGGGATCTGTCAAGATT
TTTTAAATAA

Upstream 100 bases:

>100_bases
TAAGGTTTCCTTACATGGATTTGTTTTTTATAAAAAAATATGATAAATTACAACTATGTTCGAAAGGGTGTTGAAGATGC
GTGATGCAATAAGAAGAAAT

Downstream 100 bases:

>100_bases
ACAACTGGAGGATATTATGGCGAAATTTACAAGAGAAGACATCATCAAGTTAGCAGAGGAATCAAACGTACGTTATTTAA
GACTACAATTTTCTGATATT

Product: glutamine synthetase repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPVFPMSVVMKLTELSARQIRYYESQSLITPERTSGNQRLFSMNDLDLLLDIKLLLEKGFNMKRIKSIINEEKSQQPTFE
IKESLDYEVSRLDRSKIPINRGDLSRFFK

Sequences:

>Translated_109_residues
MPVFPMSVVMKLTELSARQIRYYESQSLITPERTSGNQRLFSMNDLDLLLDIKLLLEKGFNMKRIKSIINEEKSQQPTFE
IKESLDYEVSRLDRSKIPINRGDLSRFFK
>Mature_108_residues
PVFPMSVVMKLTELSARQIRYYESQSLITPERTSGNQRLFSMNDLDLLLDIKLLLEKGFNMKRIKSIINEEKSQQPTFEI
KESLDYEVSRLDRSKIPINRGDLSRFFK

Specific function: Repressor for the glnRA operon. Binds specifically to the promoter region of the glnRA operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 12846; Mature: 12715

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVFPMSVVMKLTELSARQIRYYESQSLITPERTSGNQRLFSMNDLDLLLDIKLLLEKGF
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC
NMKRIKSIINEEKSQQPTFEIKESLDYEVSRLDRSKIPINRGDLSRFFK
CHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
PVFPMSVVMKLTELSARQIRYYESQSLITPERTSGNQRLFSMNDLDLLLDIKLLLEKGF
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCC
NMKRIKSIINEEKSQQPTFEIKESLDYEVSRLDRSKIPINRGDLSRFFK
CHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]