| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is porA [H]
Identifier: 222151127
GI number: 222151127
Start: 967242
End: 968975
Strand: Direct
Name: porA [H]
Synonym: MCCL_0878
Alternate gene names: 222151127
Gene position: 967242-968975 (Clockwise)
Preceding gene: 222151126
Following gene: 222151128
Centisome position: 46.01
GC content: 40.54
Gene sequence:
>1734_bases TTGAAGACACAAATTTCTTGGAAAGTCGGCGGTCAGCAAGGTGAAGGAATTGAAAGTACTGGAGAGATTTTCTCAACTGC GCTGAATCGTCTGGGCTATTATTTATATGGTTATCGTCATTTCTCATCACGTATTAAAGGTGGACATACGAACAATAAGA TTCGTGTATCAACAACACCTGTCTATGCTATCAGTGATGATCTGGATATACTTGTGGCATTTGATCAGGAGACGATTGAT TTAAACTATCATGAACTGACAGCTGAAGGGATAATACTTGCAGACAGTAAGTTTGATCCTGTTGCACCAGAGGATTATAA TGGCGTATTTATTAGCATGGGATTCACTGAAATTGCAAAAGAACTTGGTACGGCATTGATGAAGAACATGGTGGCAGTCG GTGCTACAGCTAATCTTATAGGCGCTGACCTAAAGCACTTCGAAGTTTTAGTGGATGACCTGTTCGCTAAAAAAGGTGAA AAGATCTGTACATTAAATAAAGAAGCGCTGCACAAAGGTTATGCAGAAATTGAAAGTCATTCAGAACTTACTGTGGATTA TAAATTAGAACCTTCAACCGAAGAAGGACATCTATTTATGATTGGTAATGAAGCAATTTCGCTTGGCGCATTAGCAGGAG GAGCACGTTTTATGGCTGCTTACCCAATTACACCAGCAAGTGAAATTATGGAATATATGATTGATAAGTTACCACGCTTT GGTGGAACTGTAATACAGACAGAAGATGAGATTGCTGCAGCAGTTATGGCAATAGGCGTAAACTATGCAGGCGTACGTGC ATTTACTGCATCGAGTGGTCCAGGACTATCGTTAATGATGGAAGCGATTGGACTGAGTGGTATGACTGAACAGCCGTTAG TAATTGTAAATACGATGCGTGGCGGCCCATCTACAGGATTGCCAACGAAGCAGGAGCAGTCAGACTTAATGCAGATGATC TATGGAACGCATGGTGAGATTCCAAAGATCGTCCTTGCACCAACTACTGCTGAAGATGCCTTCTACTTAACGAACGAAGC ATTTAATCTAGCGGAAGTATATCAATGTCCGGTTATTATTTTAAGTGATTTACAGCTTTCTTTAGGGAAACAGACGGTTC CTGTACTTGATTATAATAAGATTAATATTGATCGTGGTTCACTAGTTACTGATATTGCACCAACGGAGGATAAAGCATAC TTCAAACGCTATGCGGTAACAGATAATGGCATTTCACCACGTACGATTCCGGGTGTGAAAAACGGCATCCATCACGTAAC AGGTGTTGAACATAACGAAGAAGGAAAGCCGAGCGAATCTCCCGTGAACCGTGCAAAGCAGATGGAGAAACGTATGCGTA AATTAGAACAGCTGAAGATTACTGAGCCTGTTGTATACAATGCGCATCATGAAGCTGCAGATGTGTTAGTGATTGGTTAT ATTTCAACGTATGGAGCGATTGATGAAGCAATCCATCGTGTAGAAGGAAAAGTAAACCATCTGCATATGAAGCAACTTCA TCCATTTCCGACAGAAGAGGTTCAGCAAGCGATAGATAAAGCGAAGAAAGTGATTGTTGTTGAACATAACTTTAACGGAC AGCTTGGACAGATTATCAAGATGAATACGAATCATCAAGGTAAGATGATTCAGATGAGCAAGTATGATGGTACGCCATAC TTACCTCACGAAATTGAAGAGAAAATCAACGCAACATTAAAGGAGTTAATATAG
Upstream 100 bases:
>100_bases TCGGCCATTCGACTGATTTTTATACAATTTACCTATGTCTGTTATATAGACATAGGTTTTTCTGTTATATTAGAGATAGT TAATTTAGGGAGGAATTGTT
Downstream 100 bases:
>100_bases ATGGCAACATTTAAAGATTTCAGAAATAATGTGAAACCGAACTGGTGTCCTGGCTGTGGTGACTTTTCAGTACAAGCAGC AATCCAAAAAGCATGTGCGA
Product: 2-oxoacid ferredoxin oxidoreductase alpha subunit
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MKTQISWKVGGQQGEGIESTGEIFSTALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTPVYAISDDLDILVAFDQETID LNYHELTAEGIILADSKFDPVAPEDYNGVFISMGFTEIAKELGTALMKNMVAVGATANLIGADLKHFEVLVDDLFAKKGE KICTLNKEALHKGYAEIESHSELTVDYKLEPSTEEGHLFMIGNEAISLGALAGGARFMAAYPITPASEIMEYMIDKLPRF GGTVIQTEDEIAAAVMAIGVNYAGVRAFTASSGPGLSLMMEAIGLSGMTEQPLVIVNTMRGGPSTGLPTKQEQSDLMQMI YGTHGEIPKIVLAPTTAEDAFYLTNEAFNLAEVYQCPVIILSDLQLSLGKQTVPVLDYNKINIDRGSLVTDIAPTEDKAY FKRYAVTDNGISPRTIPGVKNGIHHVTGVEHNEEGKPSESPVNRAKQMEKRMRKLEQLKITEPVVYNAHHEAADVLVIGY ISTYGAIDEAIHRVEGKVNHLHMKQLHPFPTEEVQQAIDKAKKVIVVEHNFNGQLGQIIKMNTNHQGKMIQMSKYDGTPY LPHEIEEKINATLKELI
Sequences:
>Translated_577_residues MKTQISWKVGGQQGEGIESTGEIFSTALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTPVYAISDDLDILVAFDQETID LNYHELTAEGIILADSKFDPVAPEDYNGVFISMGFTEIAKELGTALMKNMVAVGATANLIGADLKHFEVLVDDLFAKKGE KICTLNKEALHKGYAEIESHSELTVDYKLEPSTEEGHLFMIGNEAISLGALAGGARFMAAYPITPASEIMEYMIDKLPRF GGTVIQTEDEIAAAVMAIGVNYAGVRAFTASSGPGLSLMMEAIGLSGMTEQPLVIVNTMRGGPSTGLPTKQEQSDLMQMI YGTHGEIPKIVLAPTTAEDAFYLTNEAFNLAEVYQCPVIILSDLQLSLGKQTVPVLDYNKINIDRGSLVTDIAPTEDKAY FKRYAVTDNGISPRTIPGVKNGIHHVTGVEHNEEGKPSESPVNRAKQMEKRMRKLEQLKITEPVVYNAHHEAADVLVIGY ISTYGAIDEAIHRVEGKVNHLHMKQLHPFPTEEVQQAIDKAKKVIVVEHNFNGQLGQIIKMNTNHQGKMIQMSKYDGTPY LPHEIEEKINATLKELI >Mature_577_residues MKTQISWKVGGQQGEGIESTGEIFSTALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTPVYAISDDLDILVAFDQETID LNYHELTAEGIILADSKFDPVAPEDYNGVFISMGFTEIAKELGTALMKNMVAVGATANLIGADLKHFEVLVDDLFAKKGE KICTLNKEALHKGYAEIESHSELTVDYKLEPSTEEGHLFMIGNEAISLGALAGGARFMAAYPITPASEIMEYMIDKLPRF GGTVIQTEDEIAAAVMAIGVNYAGVRAFTASSGPGLSLMMEAIGLSGMTEQPLVIVNTMRGGPSTGLPTKQEQSDLMQMI YGTHGEIPKIVLAPTTAEDAFYLTNEAFNLAEVYQCPVIILSDLQLSLGKQTVPVLDYNKINIDRGSLVTDIAPTEDKAY FKRYAVTDNGISPRTIPGVKNGIHHVTGVEHNEEGKPSESPVNRAKQMEKRMRKLEQLKITEPVVYNAHHEAADVLVIGY ISTYGAIDEAIHRVEGKVNHLHMKQLHPFPTEEVQQAIDKAKKVIVVEHNFNGQLGQIIKMNTNHQGKMIQMSKYDGTPY LPHEIEEKINATLKELI
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 63458; Mature: 63458
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQISWKVGGQQGEGIESTGEIFSTALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTP CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECE VYAISDDLDILVAFDQETIDLNYHELTAEGIILADSKFDPVAPEDYNGVFISMGFTEIAK EEEECCCCEEEEEECCCEEECCHHEECCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHH ELGTALMKNMVAVGATANLIGADLKHFEVLVDDLFAKKGEKICTLNKEALHKGYAEIESH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCHHHHCCC SELTVDYKLEPSTEEGHLFMIGNEAISLGALAGGARFMAAYPITPASEIMEYMIDKLPRF CEEEEEEEECCCCCCCEEEEECCCEEEEHEECCCCEEEEEECCCCHHHHHHHHHHHCCCC GGTVIQTEDEIAAAVMAIGVNYAGVRAFTASSGPGLSLMMEAIGLSGMTEQPLVIVNTMR CCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECC GGPSTGLPTKQEQSDLMQMIYGTHGEIPKIVLAPTTAEDAFYLTNEAFNLAEVYQCPVII CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHCCEEE LSDLQLSLGKQTVPVLDYNKINIDRGSLVTDIAPTEDKAYFKRYAVTDNGISPRTIPGVK EECCHHHCCCCCCCEEECCEEECCCCCEEECCCCCCCHHHHHEEEECCCCCCCCCCCCHH NGIHHVTGVEHNEEGKPSESPVNRAKQMEKRMRKLEQLKITEPVVYNAHHEAADVLVIGY CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE ISTYGAIDEAIHRVEGKVNHLHMKQLHPFPTEEVQQAIDKAKKVIVVEHNFNGQLGQIIK HHHHHHHHHHHHHHCCCHHEEEHHHCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCEEEE MNTNHQGKMIQMSKYDGTPYLPHEIEEKINATLKELI ECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MKTQISWKVGGQQGEGIESTGEIFSTALNRLGYYLYGYRHFSSRIKGGHTNNKIRVSTTP CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECE VYAISDDLDILVAFDQETIDLNYHELTAEGIILADSKFDPVAPEDYNGVFISMGFTEIAK EEEECCCCEEEEEECCCEEECCHHEECCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHH ELGTALMKNMVAVGATANLIGADLKHFEVLVDDLFAKKGEKICTLNKEALHKGYAEIESH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCHHHHCCC SELTVDYKLEPSTEEGHLFMIGNEAISLGALAGGARFMAAYPITPASEIMEYMIDKLPRF CEEEEEEEECCCCCCCEEEEECCCEEEEHEECCCCEEEEEECCCCHHHHHHHHHHHCCCC GGTVIQTEDEIAAAVMAIGVNYAGVRAFTASSGPGLSLMMEAIGLSGMTEQPLVIVNTMR CCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECC GGPSTGLPTKQEQSDLMQMIYGTHGEIPKIVLAPTTAEDAFYLTNEAFNLAEVYQCPVII CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHCCEEE LSDLQLSLGKQTVPVLDYNKINIDRGSLVTDIAPTEDKAYFKRYAVTDNGISPRTIPGVK EECCHHHCCCCCCCEEECCEEECCCCCEEECCCCCCCHHHHHEEEECCCCCCCCCCCCHH NGIHHVTGVEHNEEGKPSESPVNRAKQMEKRMRKLEQLKITEPVVYNAHHEAADVLVIGY CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEE ISTYGAIDEAIHRVEGKVNHLHMKQLHPFPTEEVQQAIDKAKKVIVVEHNFNGQLGQIIK HHHHHHHHHHHHHHCCCHHEEEHHHCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCEEEE MNTNHQGKMIQMSKYDGTPYLPHEIEEKINATLKELI ECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]