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The map label for this gene is ymdB [H]

Identifier: 222151126

GI number: 222151126

Start: 966343

End: 967137

Strand: Direct

Name: ymdB [H]

Synonym: MCCL_0877

Alternate gene names: 222151126

Gene position: 966343-967137 (Clockwise)

Preceding gene: 222151125

Following gene: 222151127

Centisome position: 45.97

GC content: 40.13

Gene sequence:

>795_bases
ATGAGAATTTTATTTATTGGTGATGTAGTAGGTGCTGTTGGTCGTAATATGTTAGGTGAGTACTTACCACAGCTTAAAAA
GAAGTACGGACCGAATATTACGATAGTCAATGGTGAGAATGCTGCGCATGGACGAGGGATTACAGAAAAGATATTTAAAG
AAATGATGACGCTCGGAGTCGATTGTGTCACAATGGGTAACCATACATATGGTGTGCGTGATAGCTATGAATTGTTAAAT
AGCCATCATAAGATTATTCGTCCAGCAAACTTTCCTGATGAAGCACCGGGTAAAGGAATGGAGATCATTAAATTTAATGA
TAAGAAAGTTGCTGTGATCAATCTACAAGGGCGAGCATTTATGATGCAGAGTGACTGTCCGTTTAAGACCTTCGATGCAC
TATATGAAATCGCTAAGCAGGAGACGGACTATATATTTGTAGATTTTCATGCAGAAACAACAAGCGAAAAGGGGGCATTT
GCATATTATGGAGATGGTCGAGCAAGTGCTGTAGTGGGGACACATACACATATTCAGACAAGTGACAACCGAATCTTATC
CGGGGGTACGGCTTTTATTACAGATGTCGGTATGACAGGTTTCTATGATGGGATACTCGGTATTAATAAGGACGAGGTCA
TCCACCGCTTCTTAACTGGAATGCCGGTTAAACATGTTGTTCCGGATACAGGACGTGGTGTGTTAAGCGGTGTATTTGTA
GAACTTAAGTCCAATGGTCAAGCAAAGAAAATTGAAAGAATACTTATAAATGAAGATCAACGGCTTGATCGATAA

Upstream 100 bases:

>100_bases
TGCATTTTATCACCTCGTTTATGATTGTATCAATAAAAATCATTTAATTCATTTATTATTTTCTATATAATAAAGACAAA
TAGAGTAGAGGTAGTGAATT

Downstream 100 bases:

>100_bases
CGTATCGGCCATTCGACTGATTTTTATACAATTTACCTATGTCTGTTATATAGACATAGGTTTTTCTGTTATATTAGAGA
TAGTTAATTTAGGGAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRILFIGDVVGAVGRNMLGEYLPQLKKKYGPNITIVNGENAAHGRGITEKIFKEMMTLGVDCVTMGNHTYGVRDSYELLN
SHHKIIRPANFPDEAPGKGMEIIKFNDKKVAVINLQGRAFMMQSDCPFKTFDALYEIAKQETDYIFVDFHAETTSEKGAF
AYYGDGRASAVVGTHTHIQTSDNRILSGGTAFITDVGMTGFYDGILGINKDEVIHRFLTGMPVKHVVPDTGRGVLSGVFV
ELKSNGQAKKIERILINEDQRLDR

Sequences:

>Translated_264_residues
MRILFIGDVVGAVGRNMLGEYLPQLKKKYGPNITIVNGENAAHGRGITEKIFKEMMTLGVDCVTMGNHTYGVRDSYELLN
SHHKIIRPANFPDEAPGKGMEIIKFNDKKVAVINLQGRAFMMQSDCPFKTFDALYEIAKQETDYIFVDFHAETTSEKGAF
AYYGDGRASAVVGTHTHIQTSDNRILSGGTAFITDVGMTGFYDGILGINKDEVIHRFLTGMPVKHVVPDTGRGVLSGVFV
ELKSNGQAKKIERILINEDQRLDR
>Mature_264_residues
MRILFIGDVVGAVGRNMLGEYLPQLKKKYGPNITIVNGENAAHGRGITEKIFKEMMTLGVDCVTMGNHTYGVRDSYELLN
SHHKIIRPANFPDEAPGKGMEIIKFNDKKVAVINLQGRAFMMQSDCPFKTFDALYEIAKQETDYIFVDFHAETTSEKGAF
AYYGDGRASAVVGTHTHIQTSDNRILSGGTAFITDVGMTGFYDGILGINKDEVIHRFLTGMPVKHVVPDTGRGVLSGVFV
ELKSNGQAKKIERILINEDQRLDR

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29265; Mature: 29265

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFIGDVVGAVGRNMLGEYLPQLKKKYGPNITIVNGENAAHGRGITEKIFKEMMTLGV
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC
DCVTMGNHTYGVRDSYELLNSHHKIIRPANFPDEAPGKGMEIIKFNDKKVAVINLQGRAF
EEEEECCCCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCEE
MMQSDCPFKTFDALYEIAKQETDYIFVDFHAETTSEKGAFAYYGDGRASAVVGTHTHIQT
EEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEECCEEEEC
SDNRILSGGTAFITDVGMTGFYDGILGINKDEVIHRFLTGMPVKHVVPDTGRGVLSGVFV
CCCEEEECCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHEEEEE
ELKSNGQAKKIERILINEDQRLDR
EECCCCCHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MRILFIGDVVGAVGRNMLGEYLPQLKKKYGPNITIVNGENAAHGRGITEKIFKEMMTLGV
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHCCC
DCVTMGNHTYGVRDSYELLNSHHKIIRPANFPDEAPGKGMEIIKFNDKKVAVINLQGRAF
EEEEECCCCCCCCHHHHHHHCCHHEECCCCCCCCCCCCCEEEEEECCCEEEEEEECCCEE
MMQSDCPFKTFDALYEIAKQETDYIFVDFHAETTSEKGAFAYYGDGRASAVVGTHTHIQT
EEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEECCEEEEC
SDNRILSGGTAFITDVGMTGFYDGILGINKDEVIHRFLTGMPVKHVVPDTGRGVLSGVFV
CCCEEEECCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHEEEEE
ELKSNGQAKKIERILINEDQRLDR
EECCCCCHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]