| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is ymfK [H]
Identifier: 222151121
GI number: 222151121
Start: 960538
End: 961329
Strand: Direct
Name: ymfK [H]
Synonym: MCCL_0872
Alternate gene names: 222151121
Gene position: 960538-961329 (Clockwise)
Preceding gene: 222151120
Following gene: 222151122
Centisome position: 45.69
GC content: 36.62
Gene sequence:
>792_bases ATGGAACAAACTTTAAAGAAGGAATGGTACCTTGAATATGAGATAGTGATTAATCGTGCGGGACTTCTAGGTGATGTATC AAGTCTACTAGGAGCACTTGGCATCAGTATTATTACGATTAATGGTGTTGATCAGGGAAAGCGTGGACTACTCATTAAGA CAGATGATGTTGAGAAGGTGAAACGATTTGAACATATTATTAGTCAACTTGATGATATTGAAATCGTTAAGCTGCGTAAA CCGAGATTGACAGATCGTCTTGCAGTGCGTCATGGGCAGTACATACAGAAGGATACCCATGAGAAAAATACTTTTCGCTT TGTTCGTAAAGAACTGGGAATACTGGTTGATCTAATGGCAGAACTCTTTAAAGAAGATGGACATCGATTGATTGGAATTA GAGGGATGCCGCGTGTAGGGAAGACAGAATCTATTGTTGCTGCAAGTGTATGTGCACATAAGAAATGGTTATTTATTTCT TCGACAATGATTAAGCAGACAGTGCGTAATTCTTTATTTAAAGGAGAATATGATGACAGTCATATTTACATAATAGACGG TGCGCTTTCAATCCGACAAAAGCCAGAGCACCTGGATCTAATCCGTGAAGTGATGGCACTACCTGCAACGAAAGTGGTCG AACATCCTGATCTATTTGTACAAAAAACCGATTATACATTAGATGATTTTGATTATATTATTGAGATTCGTGAAACTGAA ACTCAGGAAATTACTTATGAACAATTATCTAAAAATAATTTGTTTGATAACGATGAGTTTGGATTTTTTTAA
Upstream 100 bases:
>100_bases ATCAGCCATTTTGTACGTGCTCTGTTACACCAGTATAGCCATACCACAACAGGCACTGTAATACGTATTAATGGTGGCTG GTATATATAGGAGGAAACGA
Downstream 100 bases:
>100_bases TAAAGGAGCACTTTAATGAAACAAATTGGGCAAATTCTAAGATCTAAACGTGAGTCTCTTGGTATGACATTAATCGACCT TGAAAAGAAAATTAAAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKVKRFEHIISQLDDIEIVKLRK PRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMAELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFIS STMIKQTVRNSLFKGEYDDSHIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE TQEITYEQLSKNNLFDNDEFGFF
Sequences:
>Translated_263_residues MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKVKRFEHIISQLDDIEIVKLRK PRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMAELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFIS STMIKQTVRNSLFKGEYDDSHIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE TQEITYEQLSKNNLFDNDEFGFF >Mature_263_residues MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKVKRFEHIISQLDDIEIVKLRK PRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMAELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFIS STMIKQTVRNSLFKGEYDDSHIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE TQEITYEQLSKNNLFDNDEFGFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR016784 [H]
Pfam domain/function: PF01842 ACT [H]
EC number: NA
Molecular weight: Translated: 30426; Mature: 30426
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKV CCCCHHHHHEEEEEEEEECCCCHHHHHHHHHHHCEEEEEEECCCCCCCEEEEECCCHHHH KRFEHIISQLDDIEIVKLRKPRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMA HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH ELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFISSTMIKQTVRNSLFKGEYDDS HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCC HIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE EEEEEECCEECCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCEEEEEEECCC TQEITYEQLSKNNLFDNDEFGFF CHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEQTLKKEWYLEYEIVINRAGLLGDVSSLLGALGISIITINGVDQGKRGLLIKTDDVEKV CCCCHHHHHEEEEEEEEECCCCHHHHHHHHHHHCEEEEEEECCCCCCCEEEEECCCHHHH KRFEHIISQLDDIEIVKLRKPRLTDRLAVRHGQYIQKDTHEKNTFRFVRKELGILVDLMA HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH ELFKEDGHRLIGIRGMPRVGKTESIVAASVCAHKKWLFISSTMIKQTVRNSLFKGEYDDS HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCCC HIYIIDGALSIRQKPEHLDLIREVMALPATKVVEHPDLFVQKTDYTLDDFDYIIEIRETE EEEEEECCEECCCCCHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCCCEEEEEEECCC TQEITYEQLSKNNLFDNDEFGFF CHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]