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The map label for this gene is ymfH [H]

Identifier: 222151119

GI number: 222151119

Start: 958559

End: 959827

Strand: Direct

Name: ymfH [H]

Synonym: MCCL_0870

Alternate gene names: 222151119

Gene position: 958559-959827 (Clockwise)

Preceding gene: 222151118

Following gene: 222151120

Centisome position: 45.6

GC content: 35.38

Gene sequence:

>1269_bases
ATGAAGAAAACATACTATCGTTCTATAGATGAATCACTTTATGAATATCAGCTTGATAATGGACTTGATTTATTTATCAT
CCCTAAAAAGGGGTTTAAAAAGTCCTATGTTACTTTAACCGCTAAATATGGCTCTATACATAATGATTTTTATCTCGATG
ACCAGTTGATACATATGCCAAAAGGGATTGCACATTTTCTTGAACATAAGATGTTTGAAAAAGAAGACGGAGACATGTTC
AATGAATTTTCTGAGCATGGCAGTTCTGCTAATGCATTTACATCGTATGACCGAACGAGCTATTTGTTTACGACTGTCGA
AAGTCTGAAAGAAAATATCAAGCTATTAATGCATATGCTTGATACCCCATATTTTACGCCGGAAAGTGTGCACAAAGAAG
TGGGTATCATTGCTGAAGAAATTAAGATGTATCAAGACCAGCCCAACTATAAGCTCTATTATCAGACTTTAAATGCGATG
TATCATCAGCATCCCGTAAAATATGATATCGCAGGTACGATAGAAAGTATCTCTGAAATTACTGATACTACTTTATATCA
ATGCTATGAGACCTTTTATCATCCGGAGAACATGGTCATGTTTATCGTAGGAGATGTAGCGCCGGAAGAAATGTACCAAT
ATGTTAATGGTTTAGGTATAAAAAGAGATAAATACGTTCCAGCTGAACTTATGAAGATTGATGAACCGACAGAAGTGTAT
GCACCGATGATCCAATCAAAGGCAAGTATACAAAAAGATAAGTTGATGCTTGGTATTAAGACAAATGTTCATCATCGACA
TGAATCCCATATGAAAATTGAAATGGAAATGCTTTTTGCATTAGATCTTTTATTTGGAGAGCAGACTGATTTTTATCAGA
CGCTATTAGATGAACACCTCATCGATGACACGTTTGGGTATAGTTTTATTATTGAACCTACGTTTTCTCATATATTGATC
GCTGGTGCAAGCGATAATATTGAAGAACTGAAGAAGCGTATCTTGTTACAGCTGAATCATTTTGAAACGCTGAATGATGA
AGCGTCCTTTAGACGACTGATAAAACAGACAATAGGTGAATATGTTTCCAGTATGAATAGTCCTGAATATATTGCTAATC
AGTTTACACGTTATTTCTTCAATGGAGATATTCTCTTTGATTTATTACCAATACTCAATCAGCTACAACTCGAGGACTGT
ATATCAACGTATAGGACAGCGATAGCATCAGCCTCAATTACAGATAGCAGGATGCTACCGAATGGGTAA

Upstream 100 bases:

>100_bases
GGATAGAAGGTATTCAAGCTGTGACAAAGGCTGACATCGTAAATTTAGCGAAGACTGGATATTTTCACACAATATATTGT
CTAGTGAGTGAGGTGCAATA

Downstream 100 bases:

>100_bases
ATATATGGTTATTGGAGCGAGCGGAGATATCGGCAGTCAGATTACACGGGATTTGTTATTGGATGGACATGAAGTCATCG
CGCAGTACTTTAGTGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKKTYYRSIDESLYEYQLDNGLDLFIIPKKGFKKSYVTLTAKYGSIHNDFYLDDQLIHMPKGIAHFLEHKMFEKEDGDMF
NEFSEHGSSANAFTSYDRTSYLFTTVESLKENIKLLMHMLDTPYFTPESVHKEVGIIAEEIKMYQDQPNYKLYYQTLNAM
YHQHPVKYDIAGTIESISEITDTTLYQCYETFYHPENMVMFIVGDVAPEEMYQYVNGLGIKRDKYVPAELMKIDEPTEVY
APMIQSKASIQKDKLMLGIKTNVHHRHESHMKIEMEMLFALDLLFGEQTDFYQTLLDEHLIDDTFGYSFIIEPTFSHILI
AGASDNIEELKKRILLQLNHFETLNDEASFRRLIKQTIGEYVSSMNSPEYIANQFTRYFFNGDILFDLLPILNQLQLEDC
ISTYRTAIASASITDSRMLPNG

Sequences:

>Translated_422_residues
MKKTYYRSIDESLYEYQLDNGLDLFIIPKKGFKKSYVTLTAKYGSIHNDFYLDDQLIHMPKGIAHFLEHKMFEKEDGDMF
NEFSEHGSSANAFTSYDRTSYLFTTVESLKENIKLLMHMLDTPYFTPESVHKEVGIIAEEIKMYQDQPNYKLYYQTLNAM
YHQHPVKYDIAGTIESISEITDTTLYQCYETFYHPENMVMFIVGDVAPEEMYQYVNGLGIKRDKYVPAELMKIDEPTEVY
APMIQSKASIQKDKLMLGIKTNVHHRHESHMKIEMEMLFALDLLFGEQTDFYQTLLDEHLIDDTFGYSFIIEPTFSHILI
AGASDNIEELKKRILLQLNHFETLNDEASFRRLIKQTIGEYVSSMNSPEYIANQFTRYFFNGDILFDLLPILNQLQLEDC
ISTYRTAIASASITDSRMLPNG
>Mature_422_residues
MKKTYYRSIDESLYEYQLDNGLDLFIIPKKGFKKSYVTLTAKYGSIHNDFYLDDQLIHMPKGIAHFLEHKMFEKEDGDMF
NEFSEHGSSANAFTSYDRTSYLFTTVESLKENIKLLMHMLDTPYFTPESVHKEVGIIAEEIKMYQDQPNYKLYYQTLNAM
YHQHPVKYDIAGTIESISEITDTTLYQCYETFYHPENMVMFIVGDVAPEEMYQYVNGLGIKRDKYVPAELMKIDEPTEVY
APMIQSKASIQKDKLMLGIKTNVHHRHESHMKIEMEMLFALDLLFGEQTDFYQTLLDEHLIDDTFGYSFIIEPTFSHILI
AGASDNIEELKKRILLQLNHFETLNDEASFRRLIKQTIGEYVSSMNSPEYIANQFTRYFFNGDILFDLLPILNQLQLEDC
ISTYRTAIASASITDSRMLPNG

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Escherichia coli, GI1787770, Length=220, Percent_Identity=29.0909090909091, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 49227; Mature: 49227

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTYYRSIDESLYEYQLDNGLDLFIIPKKGFKKSYVTLTAKYGSIHNDFYLDDQLIHMP
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEECCHHHHCC
KGIAHFLEHKMFEKEDGDMFNEFSEHGSSANAFTSYDRTSYLFTTVESLKENIKLLMHML
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
DTPYFTPESVHKEVGIIAEEIKMYQDQPNYKLYYQTLNAMYHQHPVKYDIAGTIESISEI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEHHHHHHHHHHH
TDTTLYQCYETFYHPENMVMFIVGDVAPEEMYQYVNGLGIKRDKYVPAELMKIDEPTEVY
HHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHH
APMIQSKASIQKDKLMLGIKTNVHHRHESHMKIEMEMLFALDLLFGEQTDFYQTLLDEHL
HHHHHHHHHHCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IDDTFGYSFIIEPTFSHILIAGASDNIEELKKRILLQLNHFETLNDEASFRRLIKQTIGE
HHHCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YVSSMNSPEYIANQFTRYFFNGDILFDLLPILNQLQLEDCISTYRTAIASASITDSRMLP
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NG
CC
>Mature Secondary Structure
MKKTYYRSIDESLYEYQLDNGLDLFIIPKKGFKKSYVTLTAKYGSIHNDFYLDDQLIHMP
CCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEECCHHHHCC
KGIAHFLEHKMFEKEDGDMFNEFSEHGSSANAFTSYDRTSYLFTTVESLKENIKLLMHML
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
DTPYFTPESVHKEVGIIAEEIKMYQDQPNYKLYYQTLNAMYHQHPVKYDIAGTIESISEI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCEEHHHHHHHHHHH
TDTTLYQCYETFYHPENMVMFIVGDVAPEEMYQYVNGLGIKRDKYVPAELMKIDEPTEVY
HHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHH
APMIQSKASIQKDKLMLGIKTNVHHRHESHMKIEMEMLFALDLLFGEQTDFYQTLLDEHL
HHHHHHHHHHCHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IDDTFGYSFIIEPTFSHILIAGASDNIEELKKRILLQLNHFETLNDEASFRRLIKQTIGE
HHHCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YVSSMNSPEYIANQFTRYFFNGDILFDLLPILNQLQLEDCISTYRTAIASASITDSRMLP
HHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]