| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
Click here to switch to the map view.
The map label for this gene is rplGA [H]
Identifier: 222151101
GI number: 222151101
Start: 932465
End: 932797
Strand: Direct
Name: rplGA [H]
Synonym: MCCL_0852
Alternate gene names: 222151101
Gene position: 932465-932797 (Clockwise)
Preceding gene: 222151100
Following gene: 222151102
Centisome position: 44.35
GC content: 38.14
Gene sequence:
>333_bases ATGACATCTAAAGATAAATTGTTGAATTTGCTAGGTCTTGCGATGCGTGCAAGAAAGTTATCTACTGGAGAAGAACTTGT ATTAAATGATGTACGAAGTAAACGTGCTAAGCTCGTCATCATTTCTACAGACGCATCAAATAATACTACGAAAAATGTTT CGAACAAATGCCAGTCCTATCAAGTCGCTCTAGAACAAGTATGTACTAGGTATGAACTAGGGTTTGCACTTGGTAAAGAT GAACGTGTAACAATTGGCGTTCTGGATGCAGGATTTGCCAAGTCAATGAAAGCTTTGATTCGAGACATCAATGAGGAGAG AAGCTATGAGTAA
Upstream 100 bases:
>100_bases AAAAGAAATTAGAACATTATTTTGAGACCGATGAAACGGTGATGAATCCAGTATATGATGAAATTATTCGACTTATCTAT AGAGAGATGATTCCAAAACG
Downstream 100 bases:
>100_bases AAAGAGAATATATGAATACGCAAAAGAAGTCAGCTTAAAAAGTAAAGATATTATCGATGCATTAAAGAAAATGAACATCG AAGCATCGAGTCACATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTSKDKLLNLLGLAMRARKLSTGEELVLNDVRSKRAKLVIISTDASNNTTKNVSNKCQSYQVALEQVCTRYELGFALGKD ERVTIGVLDAGFAKSMKALIRDINEERSYE
Sequences:
>Translated_110_residues MTSKDKLLNLLGLAMRARKLSTGEELVLNDVRSKRAKLVIISTDASNNTTKNVSNKCQSYQVALEQVCTRYELGFALGKD ERVTIGVLDAGFAKSMKALIRDINEERSYE >Mature_109_residues TSKDKLLNLLGLAMRARKLSTGEELVLNDVRSKRAKLVIISTDASNNTTKNVSNKCQSYQVALEQVCTRYELGFALGKDE RVTIGVLDAGFAKSMKALIRDINEERSYE
Specific function: Unknown
COG id: COG1358
COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L7Ae family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004038 - InterPro: IPR004037 [H]
Pfam domain/function: PF01248 Ribosomal_L7Ae [H]
EC number: NA
Molecular weight: Translated: 12256; Mature: 12125
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKDKLLNLLGLAMRARKLSTGEELVLNDVRSKRAKLVIISTDASNNTTKNVSNKCQSY CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH QVALEQVCTRYELGFALGKDERVTIGVLDAGFAKSMKALIRDINEERSYE HHHHHHHHHHHHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSKDKLLNLLGLAMRARKLSTGEELVLNDVRSKRAKLVIISTDASNNTTKNVSNKCQSY CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH QVALEQVCTRYELGFALGKDERVTIGVLDAGFAKSMKALIRDINEERSYE HHHHHHHHHHHHHHHEECCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8491709; 9384377 [H]