Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is cdsA [H]

Identifier: 222151094

GI number: 222151094

Start: 921001

End: 921786

Strand: Direct

Name: cdsA [H]

Synonym: MCCL_0845

Alternate gene names: 222151094

Gene position: 921001-921786 (Clockwise)

Preceding gene: 222151093

Following gene: 222151095

Centisome position: 43.81

GC content: 36.13

Gene sequence:

>786_bases
ATGAAAACGAGAACGATTACTGCGATAATCGCAATGGCAGTTTTTTTGCCTGTAGTTGTATATGGAAAGCTGCCACTATT
AATTATGGCATACTTACTTGCGATTGTAGCGCTTAAAGAAGTATTAAATATGAAGAATATCAAGCTTTATTCATTACCTG
GCATCATTAGTGTTATTGCGCTATGTTTAATTATGTCACCAGAAAAAAGTAAGCTTGTTGCACTTGATTATCAGGTTCCT
TTTTTGATATTAATGAGTTTGATTATGCTGAGCTATACAGTGATGAGTAAGAATAGATTTAATTTCGTAGATGCTGCATT
TTGTATGCTTGCAGTTGCATATATTGGGATTGGTTTTATGTATTTCTACGAGACGCGTAATAACGGTCTGATTTATATCT
TATTTGCTTTGCTTATCGTATGGGTCACAGATACAGGTGCATACATATTTGGGCGTTTATTTGGCAAGAATAAGCTGTGG
CCAGAAATCAGTCCCAATAAAACGATAGAAGGCTTTATAGGAGGTATTCTAAGTTCTACGATAATAGCAATTATATTCAG
CATCAATTATGATATGCCACTATCGATCTTGCCACTGATTCTGGTAACCTGGTTATTCAGTATGTTCGGTCAGCTCGGTG
ATTTAGTGGAAAGTGCATTAAAGCGTCATTTCGACGTTAAAGACTCAGGGAATCTTCTGCCGGGTCACGGTGGGATTCTT
GACCGCTTCGATTCATTTATCTTTGTATTACCTTTAATGAACATATTGTTGATCAGTTTCAAGTAA

Upstream 100 bases:

>100_bases
GATGAATACTGGCCAGACTTTACAGTACAAAGTTTAGATAAATGTATTTCAATATACCAGAATCGACATAGACGATTCGG
TGGACTATAAGGAGTAAATC

Downstream 100 bases:

>100_bases
ATCATAGTATCTCTTTATAGCTACAGCCCTATTCGTGCCTTGTTTAATCATGAATAGGGTTATTTTTTGTGGTAGATTAG
TATTTGAATTTCTTATGATG

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIALCLIMSPEKSKLVALDYQVP
FLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFMYFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLW
PEISPNKTIEGFIGGILSSTIIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL
DRFDSFIFVLPLMNILLISFK

Sequences:

>Translated_261_residues
MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIALCLIMSPEKSKLVALDYQVP
FLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFMYFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLW
PEISPNKTIEGFIGGILSSTIIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL
DRFDSFIFVLPLMNILLISFK
>Mature_261_residues
MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIALCLIMSPEKSKLVALDYQVP
FLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFMYFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLW
PEISPNKTIEGFIGGILSSTIIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL
DRFDSFIFVLPLMNILLISFK

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=138, Percent_Identity=41.304347826087, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1787677, Length=109, Percent_Identity=44.954128440367, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 29233; Mature: 29233

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
LCLIMSPEKSKLVALDYQVPFLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFM
HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLWPEISPNKTIEGFIGGILSST
HEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
IIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
DRFDSFIFVLPLMNILLISFK
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTRTITAIIAMAVFLPVVVYGKLPLLIMAYLLAIVALKEVLNMKNIKLYSLPGIISVIA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
LCLIMSPEKSKLVALDYQVPFLILMSLIMLSYTVMSKNRFNFVDAAFCMLAVAYIGIGFM
HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YFYETRNNGLIYILFALLIVWVTDTGAYIFGRLFGKNKLWPEISPNKTIEGFIGGILSST
HEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
IIAIIFSINYDMPLSILPLILVTWLFSMFGQLGDLVESALKRHFDVKDSGNLLPGHGGIL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
DRFDSFIFVLPLMNILLISFK
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA